mRNA_E-fasciculatus_F_contig12415.1859.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig12415.1859.1 vs. uniprot
Match: D7FIN5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIN5_ECTSI) HSP 1 Score: 402 bits (1033), Expect = 8.940e-138 Identity = 213/225 (94.67%), Postives = 219/225 (97.33%), Query Frame = 1
Query: 1 PLASILGDFTEEVSAHTNQTLGGLIQATLGNAVEIVVSIQALYANQIRVVQASLLGSVFSNMLLVLGCCFFFGGLKHKEQRFNSTSAIANMSLLLLSSLALVLPTPLSHVSEMGDLLTVSRFSGVFLLIMYVQLLIFQFKTHAYLFANTDEDGTNLKLSTSLVGLAVITGLVAWLSEFLVDAIDGFTEEARLSKSFVGLILLPIIGNAVEHITAITVATKVKVNL 675
PLASILGDFTEEVSAHTNQTLGGLIQATLGNAVEIVVSIQALYANQIRVVQASLLGSVFSNMLLVLGCCFFFGGLKHKEQRFNSTSAIANMSLLLLSSLALVLPTPLSH +EMGDLLTVSRFSGVFLLIMYVQLL+FQFKTHAYLFANTD+DGTNLKL TSLVGLAV+TGLVAWLSEFLVDAIDGFTEEA LSKSFVGLILLPIIGNAVEHITA+TVA K K+ L
Sbjct: 144 PLASILGDFTEEVSAHTNQTLGGLIQATLGNAVEIVVSIQALYANQIRVVQASLLGSVFSNMLLVLGCCFFFGGLKHKEQRFNSTSAIANMSLLLLSSLALVLPTPLSHAAEMGDLLTVSRFSGVFLLIMYVQLLVFQFKTHAYLFANTDDDGTNLKLGTSLVGLAVVTGLVAWLSEFLVDAIDGFTEEAHLSKSFVGLILLPIIGNAVEHITAVTVAMKNKMEL 368
BLAST of mRNA_E-fasciculatus_F_contig12415.1859.1 vs. uniprot
Match: A0A835ZBG0_9STRA (Sodium/calcium exchanger protein-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBG0_9STRA) HSP 1 Score: 309 bits (791), Expect = 1.890e-102 Identity = 159/225 (70.67%), Postives = 194/225 (86.22%), Query Frame = 1
Query: 1 PLASILGDFTEEVSAHTNQTLGGLIQATLGNAVEIVVSIQALYANQIRVVQASLLGSVFSNMLLVLGCCFFFGGLKHKEQRFNSTSAIANMSLLLLSSLALVLPTPLSHVSEMGDLLTVSRFSGVFLLIMYVQLLIFQFKTHAYLFANTDEDGTNLKLSTSLVGLAVITGLVAWLSEFLVDAIDGFTEEARLSKSFVGLILLPIIGNAVEHITAITVATKVKVNL 675
PLAS+LG+FTEEV+ HTNQT+GGLI AT GNAVE+VV++QAL+A QIRVVQASL+GSVFSNMLLVLGCCFFFGGL++KEQRFNSTSA+ANMSLLLLSSLALVLPTPL+ E G++L +SRF+G+ LL MYVQL+ FQ KTH++L+ + DE + L + + +GL +T VA+LSE LVD+IDGFTE+A LSK+FVGLILLPIIGNAVEH+TA+TVA K K+ L
Sbjct: 31 PLASLLGEFTEEVAMHTNQTIGGLINATFGNAVEVVVALQALHAGQIRVVQASLMGSVFSNMLLVLGCCFFFGGLRYKEQRFNSTSAVANMSLLLLSSLALVLPTPLAQSHEDGNVLLISRFAGICLLFMYVQLMFFQLKTHSHLYGDEDEVRSELSMPGACIGLLTVTLAVAYLSELLVDSIDGFTEQAHLSKTFVGLILLPIIGNAVEHVTAVTVAMKDKMEL 255
BLAST of mRNA_E-fasciculatus_F_contig12415.1859.1 vs. uniprot
Match: A0A7S4W0D3_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4W0D3_9STRA) HSP 1 Score: 285 bits (730), Expect = 3.260e-92 Identity = 145/227 (63.88%), Postives = 190/227 (83.70%), Query Frame = 1
Query: 1 PLASILGDFTEEVSAHTNQTLGGLIQATLGNAVEIVVSIQALYANQIRVVQASLLGSVFSNMLLVLGCCFFFGGLKHKEQRFNSTSAIANMSLLLLSSLALVLPTPLSHVSEMGD--LLTVSRFSGVFLLIMYVQLLIFQFKTHAYLFANTDEDGTNLKLSTSLVGLAVITGLVAWLSEFLVDAIDGFTEEARLSKSFVGLILLPIIGNAVEHITAITVATKVKVNL 675
PLAS+LGDFTEE++AHTNQ +GGLI AT GNAVE+VV+IQAL AN+IRVVQAS++GS+FSN+LLVLG CFFFGGLKHKEQ FNST+A AN+SLL L +ALVLPTP + ++ + +L +SRF+ +FL++MY QLLIFQ KTHA+LFA+ DE+ +L ++ GL ++TG++A +S+FLVD+IDGF E +SK+F+GLI+LPI+GNAVEHITAI+VA K K++L
Sbjct: 169 PLASMLGDFTEELAAHTNQVIGGLINATFGNAVEVVVAIQALLANEIRVVQASMIGSIFSNLLLVLGGCFFFGGLKHKEQSFNSTAATANISLLALGCMALVLPTPFAEYYDVEEERVLHISRFAALFLMLMYAQLLIFQIKTHAFLFADEDEEMASLPFWVAMAGLVIVTGVIAIMSDFLVDSIDGFCESTGVSKTFIGLIILPIVGNAVEHITAISVAMKDKMDL 395
BLAST of mRNA_E-fasciculatus_F_contig12415.1859.1 vs. uniprot
Match: A0A7S1ZP93_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZP93_TRICV) HSP 1 Score: 274 bits (700), Expect = 1.130e-88 Identity = 142/227 (62.56%), Postives = 186/227 (81.94%), Query Frame = 1
Query: 1 PLASILGDFTEEVSAHTNQTLGGLIQATLGNAVEIVVSIQALYANQIRVVQASLLGSVFSNMLLVLGCCFFFGGLKHKEQRFNSTSAIANMSLLLLSSLALVLPTPLSHVSEMGD--LLTVSRFSGVFLLIMYVQLLIFQFKTHAYLFANTDEDGTNLKLSTSLVGLAVITGLVAWLSEFLVDAIDGFTEEARLSKSFVGLILLPIIGNAVEHITAITVATKVKVNL 675
PLA+ILGDFTEEV+AHTNQ +GGLI AT GNAVE+VV++QAL+AN+IRVVQAS++GS+FSN+LLVLG CFFFGGLK+KEQ FNST+ ANMSLL LSS+AL LPTP + E+ D +L +SR + VFL+ MY+QLL+FQ THA LF + D+ T + + +L GL V+T ++A LS++LV +IDGF E+ +S++FVGLI+LPI+GNAVEH+TAI+VA K K++L
Sbjct: 29 PLAAILGDFTEEVAAHTNQVVGGLINATFGNAVEVVVAVQALHANEIRVVQASMIGSIFSNLLLVLGGCFFFGGLKYKEQSFNSTAVTANMSLLALSSVALALPTPFAEYYEVHDDNVLVISRIAAVFLIFMYLQLLVFQLHTHADLFDDDDDTPTEMSSTAALTGLVVVTLVIAQLSDYLVGSIDGFCTESGVSRTFVGLIVLPIVGNAVEHVTAISVAMKDKMDL 255
BLAST of mRNA_E-fasciculatus_F_contig12415.1859.1 vs. uniprot
Match: A0A8J9TFQ4_PHATR (Hypothetical protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=A0A8J9TFQ4_PHATR) HSP 1 Score: 272 bits (696), Expect = 5.490e-88 Identity = 143/229 (62.45%), Postives = 183/229 (79.91%), Query Frame = 1
Query: 1 PLASILGDFTEEVSAHTNQTLGGLIQATLGNAVEIVVSIQALYANQIRVVQASLLGSVFSNMLLVLGCCFFFGGLKHKEQRFNSTSAIANMSLLLLSSLALVLPTPLSHVSEMGD--LLTVSRFSGVFLLIMYVQLLIFQFKTHAYLFANTDEDG--TNLKLSTSLVGLAVITGLVAWLSEFLVDAIDGFTEEARLSKSFVGLILLPIIGNAVEHITAITVATKVKVNL 675
PLASILGDFTEEV+ HTNQT+GGLI AT GNAVE+VV+IQAL AN+IRVVQAS++GS+FSN+LLVLGCCFFFGGL H++QRFNS +A ANM LL LSS+AL+LPTP + E+ D +LTVSR + FL+ MY+QLL FQ KTHA LFA T +D + S+VGL T ++ S++LV++IDGF ++ +S++FVG+ILLPI+GNAVEH+TA+TVA K K++L
Sbjct: 34 PLASILGDFTEEVALHTNQTIGGLINATFGNAVEVVVAIQALLANEIRVVQASMIGSIFSNLLLVLGCCFFFGGLGHQQQRFNSVAATANMGLLALSSIALILPTPFAAYYELHDAHVLTVSRIAACFLMCMYLQLLFFQLKTHANLFAGTQDDSELAVMPFWVSIVGLLFTTLVITIFSDYLVESIDGFVTDSGISRTFVGIILLPIVGNAVEHVTAVTVAMKDKMDL 262
BLAST of mRNA_E-fasciculatus_F_contig12415.1859.1 vs. uniprot
Match: A0A1Z5KS18_FISSO (Ca2+:H+ antiporter n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KS18_FISSO) HSP 1 Score: 276 bits (705), Expect = 7.930e-88 Identity = 145/229 (63.32%), Postives = 182/229 (79.48%), Query Frame = 1
Query: 1 PLASILGDFTEEVSAHTNQTLGGLIQATLGNAVEIVVSIQALYANQIRVVQASLLGSVFSNMLLVLGCCFFFGGLKHKEQRFNSTSAIANMSLLLLSSLALVLPTPLSHVSEMGD--LLTVSRFSGVFLLIMYVQLLIFQFKTHAYLFANTDEDG--TNLKLSTSLVGLAVITGLVAWLSEFLVDAIDGFTEEARLSKSFVGLILLPIIGNAVEHITAITVATKVKVNL 675
P ASILGDFTEE++ HTN+T+GGLI A+ GNAVE+VV+I AL A +IRVVQ SLLGS+FSN+LLVLGCCFFFGGLKHKEQ+FN+TSA ANM LL LSS+AL LPTP + + D +L VSR + VFLL MY QLL+FQ THA +F N +D T + + +LVGL T LVA+ S+FLV++IDGFTE + +S++FVG+ILLPI+GNAVEH+TA+TVA K K++L
Sbjct: 152 PFASILGDFTEELALHTNETIGGLINASFGNAVEVVVAINALLAGEIRVVQGSLLGSIFSNLLLVLGCCFFFGGLKHKEQKFNATSATANMGLLALSSIALALPTPFAQYYNLHDSEVLLVSRLAAVFLLFMYAQLLVFQLHTHADIFENDGDDAPFTRITMPVALVGLLTTTLLVAFFSDFLVESIDGFTEASGISRTFVGIILLPIVGNAVEHVTAVTVAMKDKMDL 380
BLAST of mRNA_E-fasciculatus_F_contig12415.1859.1 vs. uniprot
Match: A0A7S2V7W0_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V7W0_9STRA) HSP 1 Score: 269 bits (687), Expect = 3.460e-86 Identity = 146/228 (64.04%), Postives = 182/228 (79.82%), Query Frame = 1
Query: 1 PLASILGDFTEEVSAHTNQTLGGLIQATLGNAVEIVVSIQALYANQIRVVQASLLGSVFSNMLLVLGCCFFFGGLKHKEQRFNSTSAIANMSLLLLSSLALVLPTPLSHVS--EMGDLLTVSRFSGVFLLIMYVQLLIFQFKTHAYLFANTDE-DGTNLKLSTSLVGLAVITGLVAWLSEFLVDAIDGFTEEARLSKSFVGLILLPIIGNAVEHITAITVATKVKVNL 675
PLAS+LGDFTEE + H QTLGGL+ AT GNAVE+VVSIQAL + QIRVVQ+SLLGSV SN+LLVLGCCFFFGG++ EQ FN T+A AN SLLLLSSLAL+LPTP+ E ++L VSR +GVF+L MY+QLL FQ +TH ++F + +G + LS +LVGLA++T V+ LS++LVD+IDGFTEEA LSKSFVG+ILLPIIGN VEH+TA+++A K K+ L
Sbjct: 67 PLASLLGDFTEEAATHVGQTLGGLLNATFGNAVEVVVSIQALRSGQIRVVQSSLLGSVLSNLLLVLGCCFFFGGIRRDEQTFNVTAAKANTSLLLLSSLALILPTPMGSTGYVEEENVLFVSRITGVFMLFMYLQLLFFQLRTHKHMFEDEXXXEGGGMSLSGALVGLALMTLAVSVLSDYLVDSIDGFTEEADLSKSFVGIILLPIIGNVVEHLTAVSMAMKDKMEL 294
BLAST of mRNA_E-fasciculatus_F_contig12415.1859.1 vs. uniprot
Match: A0A1Z5KRG5_FISSO (Ca2+:H+ antiporter n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KRG5_FISSO) HSP 1 Score: 266 bits (681), Expect = 8.800e-85 Identity = 142/230 (61.74%), Postives = 179/230 (77.83%), Query Frame = 1
Query: 1 PLASILGDFTEEVSAHTNQTLGGLIQATLGNAVEIVVSIQALYANQIRVVQASLLGSVFSNMLLVLGCCFFFGGLKHKEQRFNSTSAIANMSLLLLSSLALVLPTPLSHVSEMGD--LLTVSRFSGVFLLIMYVQLLIFQFKTHAYLFANT---DEDGTNLKLSTSLVGLAVITGLVAWLSEFLVDAIDGFTEEARLSKSFVGLILLPIIGNAVEHITAITVATKVKVNL 675
PLASILGDFTEE++ HTN T+GGLI A+ GNAVE+VV+I AL A +IRVVQ SLLGS+FSN+LLVLG CFFFGGL+H+EQ FN+T+A ANM LL LSS+ALVLPTP + E+ D +L VSR + VFLL MY QLL+FQ TH +F N DE + ++ ++ GL V T LVA S FLVD+IDGFTE + +S++FVG++L+PI+GNAVEHITA+TVA K K++L
Sbjct: 105 PLASILGDFTEELALHTNDTIGGLINASFGNAVEVVVAINALLAGEIRVVQGSLLGSIFSNLLLVLGSCFFFGGLRHQEQSFNATAASANMGLLALSSIALVLPTPFAEYYELHDEQVLMVSRLAAVFLLCMYAQLLVFQLHTHTNIFQNEEGEDEQSARVSMTVAVFGLLVTTLLVALFSNFLVDSIDGFTEASGISRTFVGIVLIPIVGNAVEHITAVTVAMKNKMDL 334
BLAST of mRNA_E-fasciculatus_F_contig12415.1859.1 vs. uniprot
Match: A0A7S1USB3_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1USB3_9STRA) HSP 1 Score: 270 bits (691), Expect = 1.580e-84 Identity = 141/228 (61.84%), Postives = 183/228 (80.26%), Query Frame = 1
Query: 1 PLASILGDFTEEVSAHTNQTLGGLIQATLGNAVEIVVSIQALYANQIRVVQASLLGSVFSNMLLVLGCCFFFGGLKHKEQRFNSTSAIANMSLLLLSSLALVLPTPLSHVSEMGD--LLTVSRFSGVFLLIMYVQLLIFQFKTHAYLFANT-DEDGTNLKLSTSLVGLAVITGLVAWLSEFLVDAIDGFTEEARLSKSFVGLILLPIIGNAVEHITAITVATKVKVNL 675
PLASILGDFTEEV+AHTNQ +GGLI AT GNAVE+VV++QAL AN+IRVVQAS++GS+FSN+LLVLG CFF GGL HKEQ FN+T+A ANM+LL LSS+ALVLPTP ++ E+ D +L +SR + +FL+ MY+QLL+FQ KTH +LF DE G L + S+ GL + T L+ S++LV++IDGF + +S++FVGLI+LPI+GNAVEHITA+TVA K K++L
Sbjct: 258 PLASILGDFTEEVAAHTNQVIGGLINATFGNAVEVVVAVQALLANEIRVVQASMIGSIFSNLLLVLGGCFFMGGLVHKEQEFNATAATANMALLALSSVALVLPTPFANYYEVEDEQVLRISRVAAIFLMFMYLQLLVFQLKTHTFLFEEDGDEGGARLSMVISMSGLCITTLLITIFSDYLVESIDGFCSSSGVSRTFVGLIILPIVGNAVEHITAVTVAMKNKMDL 485
BLAST of mRNA_E-fasciculatus_F_contig12415.1859.1 vs. uniprot
Match: A0A7S3KYE4_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3KYE4_9STRA) HSP 1 Score: 267 bits (683), Expect = 5.010e-84 Identity = 143/231 (61.90%), Postives = 182/231 (78.79%), Query Frame = 1
Query: 1 PLASILGDFTEEVSAHTNQTLGGLIQATLGNAVEIVVSIQALYANQIRVVQASLLGSVFSNMLLVLGCCFFFGGLKHKEQRFNSTSAIANMSLLLLSSLALVLPTPLSHVSEMGD--LLTVSRFSGVFLLIMYVQLLIFQFKTHAYLF-ANTDEDG---TNLKLSTSLVGLAVITGLVAWLSEFLVDAIDGFTEEARLSKSFVGLILLPIIGNAVEHITAITVATKVKVNL 675
PLASILGDFTEEV+ HTN+T+GGLI AT GNAVE+VV+IQAL AN+IRVVQ+S+LGS+FSN+LLVLG CFFFGGLK+ Q FN+T+A ANM LL LS++ALVLPTP +H +M D +L +SRFS +FL+ MY QLL+FQ THA F A EDG N+ ++GL V T LV S++LV++IDGFT + +S++FVG++LLPI+GNAVEH+TAITVA K K++L
Sbjct: 180 PLASILGDFTEEVALHTNETIGGLINATFGNAVEVVVAIQALLANEIRVVQSSMLGSIFSNLLLVLGGCFFFGGLKYPNQSFNATAATANMGLLALSAIALVLPTPFAHYYDMHDDRVLLISRFSAIFLMFMYAQLLVFQLHTHANAFTAEGGEDGKELANMSFGMGILGLLVCTLLVTIFSDYLVESIDGFTTASGISRTFVGIVLLPIVGNAVEHVTAITVARKDKMDL 410 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig12415.1859.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig12415.1859.1 >prot_E-fasciculatus_F_contig12415.1859.1 ID=prot_E-fasciculatus_F_contig12415.1859.1|Name=mRNA_E-fasciculatus_F_contig12415.1859.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=225bp PLASILGDFTEEVSAHTNQTLGGLIQATLGNAVEIVVSIQALYANQIRVVback to top mRNA from alignment at E-fasciculatus_F_contig12415:578..4001- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig12415.1859.1 ID=mRNA_E-fasciculatus_F_contig12415.1859.1|Name=mRNA_E-fasciculatus_F_contig12415.1859.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=3424bp|location=Sequence derived from alignment at E-fasciculatus_F_contig12415:578..4001- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig12415:578..4001- >mRNA_E-fasciculatus_F_contig12415.1859.1 ID=mRNA_E-fasciculatus_F_contig12415.1859.1|Name=mRNA_E-fasciculatus_F_contig12415.1859.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1350bp|location=Sequence derived from alignment at E-fasciculatus_F_contig12415:578..4001- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |