mRNA_E-fasciculatus_F_contig12415.1859.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-fasciculatus_F_contig12415.1859.1
Unique NamemRNA_E-fasciculatus_F_contig12415.1859.1
TypemRNA
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Homology
BLAST of mRNA_E-fasciculatus_F_contig12415.1859.1 vs. uniprot
Match: D7FIN5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIN5_ECTSI)

HSP 1 Score: 402 bits (1033), Expect = 8.940e-138
Identity = 213/225 (94.67%), Postives = 219/225 (97.33%), Query Frame = 1
Query:    1 PLASILGDFTEEVSAHTNQTLGGLIQATLGNAVEIVVSIQALYANQIRVVQASLLGSVFSNMLLVLGCCFFFGGLKHKEQRFNSTSAIANMSLLLLSSLALVLPTPLSHVSEMGDLLTVSRFSGVFLLIMYVQLLIFQFKTHAYLFANTDEDGTNLKLSTSLVGLAVITGLVAWLSEFLVDAIDGFTEEARLSKSFVGLILLPIIGNAVEHITAITVATKVKVNL 675
            PLASILGDFTEEVSAHTNQTLGGLIQATLGNAVEIVVSIQALYANQIRVVQASLLGSVFSNMLLVLGCCFFFGGLKHKEQRFNSTSAIANMSLLLLSSLALVLPTPLSH +EMGDLLTVSRFSGVFLLIMYVQLL+FQFKTHAYLFANTD+DGTNLKL TSLVGLAV+TGLVAWLSEFLVDAIDGFTEEA LSKSFVGLILLPIIGNAVEHITA+TVA K K+ L
Sbjct:  144 PLASILGDFTEEVSAHTNQTLGGLIQATLGNAVEIVVSIQALYANQIRVVQASLLGSVFSNMLLVLGCCFFFGGLKHKEQRFNSTSAIANMSLLLLSSLALVLPTPLSHAAEMGDLLTVSRFSGVFLLIMYVQLLVFQFKTHAYLFANTDDDGTNLKLGTSLVGLAVVTGLVAWLSEFLVDAIDGFTEEAHLSKSFVGLILLPIIGNAVEHITAVTVAMKNKMEL 368          
BLAST of mRNA_E-fasciculatus_F_contig12415.1859.1 vs. uniprot
Match: A0A835ZBG0_9STRA (Sodium/calcium exchanger protein-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBG0_9STRA)

HSP 1 Score: 309 bits (791), Expect = 1.890e-102
Identity = 159/225 (70.67%), Postives = 194/225 (86.22%), Query Frame = 1
Query:    1 PLASILGDFTEEVSAHTNQTLGGLIQATLGNAVEIVVSIQALYANQIRVVQASLLGSVFSNMLLVLGCCFFFGGLKHKEQRFNSTSAIANMSLLLLSSLALVLPTPLSHVSEMGDLLTVSRFSGVFLLIMYVQLLIFQFKTHAYLFANTDEDGTNLKLSTSLVGLAVITGLVAWLSEFLVDAIDGFTEEARLSKSFVGLILLPIIGNAVEHITAITVATKVKVNL 675
            PLAS+LG+FTEEV+ HTNQT+GGLI AT GNAVE+VV++QAL+A QIRVVQASL+GSVFSNMLLVLGCCFFFGGL++KEQRFNSTSA+ANMSLLLLSSLALVLPTPL+   E G++L +SRF+G+ LL MYVQL+ FQ KTH++L+ + DE  + L +  + +GL  +T  VA+LSE LVD+IDGFTE+A LSK+FVGLILLPIIGNAVEH+TA+TVA K K+ L
Sbjct:   31 PLASLLGEFTEEVAMHTNQTIGGLINATFGNAVEVVVALQALHAGQIRVVQASLMGSVFSNMLLVLGCCFFFGGLRYKEQRFNSTSAVANMSLLLLSSLALVLPTPLAQSHEDGNVLLISRFAGICLLFMYVQLMFFQLKTHSHLYGDEDEVRSELSMPGACIGLLTVTLAVAYLSELLVDSIDGFTEQAHLSKTFVGLILLPIIGNAVEHVTAVTVAMKDKMEL 255          
BLAST of mRNA_E-fasciculatus_F_contig12415.1859.1 vs. uniprot
Match: A0A7S4W0D3_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4W0D3_9STRA)

HSP 1 Score: 285 bits (730), Expect = 3.260e-92
Identity = 145/227 (63.88%), Postives = 190/227 (83.70%), Query Frame = 1
Query:    1 PLASILGDFTEEVSAHTNQTLGGLIQATLGNAVEIVVSIQALYANQIRVVQASLLGSVFSNMLLVLGCCFFFGGLKHKEQRFNSTSAIANMSLLLLSSLALVLPTPLSHVSEMGD--LLTVSRFSGVFLLIMYVQLLIFQFKTHAYLFANTDEDGTNLKLSTSLVGLAVITGLVAWLSEFLVDAIDGFTEEARLSKSFVGLILLPIIGNAVEHITAITVATKVKVNL 675
            PLAS+LGDFTEE++AHTNQ +GGLI AT GNAVE+VV+IQAL AN+IRVVQAS++GS+FSN+LLVLG CFFFGGLKHKEQ FNST+A AN+SLL L  +ALVLPTP +   ++ +  +L +SRF+ +FL++MY QLLIFQ KTHA+LFA+ DE+  +L    ++ GL ++TG++A +S+FLVD+IDGF E   +SK+F+GLI+LPI+GNAVEHITAI+VA K K++L
Sbjct:  169 PLASMLGDFTEELAAHTNQVIGGLINATFGNAVEVVVAIQALLANEIRVVQASMIGSIFSNLLLVLGGCFFFGGLKHKEQSFNSTAATANISLLALGCMALVLPTPFAEYYDVEEERVLHISRFAALFLMLMYAQLLIFQIKTHAFLFADEDEEMASLPFWVAMAGLVIVTGVIAIMSDFLVDSIDGFCESTGVSKTFIGLIILPIVGNAVEHITAISVAMKDKMDL 395          
BLAST of mRNA_E-fasciculatus_F_contig12415.1859.1 vs. uniprot
Match: A0A7S1ZP93_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZP93_TRICV)

HSP 1 Score: 274 bits (700), Expect = 1.130e-88
Identity = 142/227 (62.56%), Postives = 186/227 (81.94%), Query Frame = 1
Query:    1 PLASILGDFTEEVSAHTNQTLGGLIQATLGNAVEIVVSIQALYANQIRVVQASLLGSVFSNMLLVLGCCFFFGGLKHKEQRFNSTSAIANMSLLLLSSLALVLPTPLSHVSEMGD--LLTVSRFSGVFLLIMYVQLLIFQFKTHAYLFANTDEDGTNLKLSTSLVGLAVITGLVAWLSEFLVDAIDGFTEEARLSKSFVGLILLPIIGNAVEHITAITVATKVKVNL 675
            PLA+ILGDFTEEV+AHTNQ +GGLI AT GNAVE+VV++QAL+AN+IRVVQAS++GS+FSN+LLVLG CFFFGGLK+KEQ FNST+  ANMSLL LSS+AL LPTP +   E+ D  +L +SR + VFL+ MY+QLL+FQ  THA LF + D+  T +  + +L GL V+T ++A LS++LV +IDGF  E+ +S++FVGLI+LPI+GNAVEH+TAI+VA K K++L
Sbjct:   29 PLAAILGDFTEEVAAHTNQVVGGLINATFGNAVEVVVAVQALHANEIRVVQASMIGSIFSNLLLVLGGCFFFGGLKYKEQSFNSTAVTANMSLLALSSVALALPTPFAEYYEVHDDNVLVISRIAAVFLIFMYLQLLVFQLHTHADLFDDDDDTPTEMSSTAALTGLVVVTLVIAQLSDYLVGSIDGFCTESGVSRTFVGLIVLPIVGNAVEHVTAISVAMKDKMDL 255          
BLAST of mRNA_E-fasciculatus_F_contig12415.1859.1 vs. uniprot
Match: A0A8J9TFQ4_PHATR (Hypothetical protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=A0A8J9TFQ4_PHATR)

HSP 1 Score: 272 bits (696), Expect = 5.490e-88
Identity = 143/229 (62.45%), Postives = 183/229 (79.91%), Query Frame = 1
Query:    1 PLASILGDFTEEVSAHTNQTLGGLIQATLGNAVEIVVSIQALYANQIRVVQASLLGSVFSNMLLVLGCCFFFGGLKHKEQRFNSTSAIANMSLLLLSSLALVLPTPLSHVSEMGD--LLTVSRFSGVFLLIMYVQLLIFQFKTHAYLFANTDEDG--TNLKLSTSLVGLAVITGLVAWLSEFLVDAIDGFTEEARLSKSFVGLILLPIIGNAVEHITAITVATKVKVNL 675
            PLASILGDFTEEV+ HTNQT+GGLI AT GNAVE+VV+IQAL AN+IRVVQAS++GS+FSN+LLVLGCCFFFGGL H++QRFNS +A ANM LL LSS+AL+LPTP +   E+ D  +LTVSR +  FL+ MY+QLL FQ KTHA LFA T +D     +    S+VGL   T ++   S++LV++IDGF  ++ +S++FVG+ILLPI+GNAVEH+TA+TVA K K++L
Sbjct:   34 PLASILGDFTEEVALHTNQTIGGLINATFGNAVEVVVAIQALLANEIRVVQASMIGSIFSNLLLVLGCCFFFGGLGHQQQRFNSVAATANMGLLALSSIALILPTPFAAYYELHDAHVLTVSRIAACFLMCMYLQLLFFQLKTHANLFAGTQDDSELAVMPFWVSIVGLLFTTLVITIFSDYLVESIDGFVTDSGISRTFVGIILLPIVGNAVEHVTAVTVAMKDKMDL 262          
BLAST of mRNA_E-fasciculatus_F_contig12415.1859.1 vs. uniprot
Match: A0A1Z5KS18_FISSO (Ca2+:H+ antiporter n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KS18_FISSO)

HSP 1 Score: 276 bits (705), Expect = 7.930e-88
Identity = 145/229 (63.32%), Postives = 182/229 (79.48%), Query Frame = 1
Query:    1 PLASILGDFTEEVSAHTNQTLGGLIQATLGNAVEIVVSIQALYANQIRVVQASLLGSVFSNMLLVLGCCFFFGGLKHKEQRFNSTSAIANMSLLLLSSLALVLPTPLSHVSEMGD--LLTVSRFSGVFLLIMYVQLLIFQFKTHAYLFANTDEDG--TNLKLSTSLVGLAVITGLVAWLSEFLVDAIDGFTEEARLSKSFVGLILLPIIGNAVEHITAITVATKVKVNL 675
            P ASILGDFTEE++ HTN+T+GGLI A+ GNAVE+VV+I AL A +IRVVQ SLLGS+FSN+LLVLGCCFFFGGLKHKEQ+FN+TSA ANM LL LSS+AL LPTP +    + D  +L VSR + VFLL MY QLL+FQ  THA +F N  +D   T + +  +LVGL   T LVA+ S+FLV++IDGFTE + +S++FVG+ILLPI+GNAVEH+TA+TVA K K++L
Sbjct:  152 PFASILGDFTEELALHTNETIGGLINASFGNAVEVVVAINALLAGEIRVVQGSLLGSIFSNLLLVLGCCFFFGGLKHKEQKFNATSATANMGLLALSSIALALPTPFAQYYNLHDSEVLLVSRLAAVFLLFMYAQLLVFQLHTHADIFENDGDDAPFTRITMPVALVGLLTTTLLVAFFSDFLVESIDGFTEASGISRTFVGIILLPIVGNAVEHVTAVTVAMKDKMDL 380          
BLAST of mRNA_E-fasciculatus_F_contig12415.1859.1 vs. uniprot
Match: A0A7S2V7W0_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V7W0_9STRA)

HSP 1 Score: 269 bits (687), Expect = 3.460e-86
Identity = 146/228 (64.04%), Postives = 182/228 (79.82%), Query Frame = 1
Query:    1 PLASILGDFTEEVSAHTNQTLGGLIQATLGNAVEIVVSIQALYANQIRVVQASLLGSVFSNMLLVLGCCFFFGGLKHKEQRFNSTSAIANMSLLLLSSLALVLPTPLSHVS--EMGDLLTVSRFSGVFLLIMYVQLLIFQFKTHAYLFANTDE-DGTNLKLSTSLVGLAVITGLVAWLSEFLVDAIDGFTEEARLSKSFVGLILLPIIGNAVEHITAITVATKVKVNL 675
            PLAS+LGDFTEE + H  QTLGGL+ AT GNAVE+VVSIQAL + QIRVVQ+SLLGSV SN+LLVLGCCFFFGG++  EQ FN T+A AN SLLLLSSLAL+LPTP+      E  ++L VSR +GVF+L MY+QLL FQ +TH ++F +    +G  + LS +LVGLA++T  V+ LS++LVD+IDGFTEEA LSKSFVG+ILLPIIGN VEH+TA+++A K K+ L
Sbjct:   67 PLASLLGDFTEEAATHVGQTLGGLLNATFGNAVEVVVSIQALRSGQIRVVQSSLLGSVLSNLLLVLGCCFFFGGIRRDEQTFNVTAAKANTSLLLLSSLALILPTPMGSTGYVEEENVLFVSRITGVFMLFMYLQLLFFQLRTHKHMFEDEXXXEGGGMSLSGALVGLALMTLAVSVLSDYLVDSIDGFTEEADLSKSFVGIILLPIIGNVVEHLTAVSMAMKDKMEL 294          
BLAST of mRNA_E-fasciculatus_F_contig12415.1859.1 vs. uniprot
Match: A0A1Z5KRG5_FISSO (Ca2+:H+ antiporter n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KRG5_FISSO)

HSP 1 Score: 266 bits (681), Expect = 8.800e-85
Identity = 142/230 (61.74%), Postives = 179/230 (77.83%), Query Frame = 1
Query:    1 PLASILGDFTEEVSAHTNQTLGGLIQATLGNAVEIVVSIQALYANQIRVVQASLLGSVFSNMLLVLGCCFFFGGLKHKEQRFNSTSAIANMSLLLLSSLALVLPTPLSHVSEMGD--LLTVSRFSGVFLLIMYVQLLIFQFKTHAYLFANT---DEDGTNLKLSTSLVGLAVITGLVAWLSEFLVDAIDGFTEEARLSKSFVGLILLPIIGNAVEHITAITVATKVKVNL 675
            PLASILGDFTEE++ HTN T+GGLI A+ GNAVE+VV+I AL A +IRVVQ SLLGS+FSN+LLVLG CFFFGGL+H+EQ FN+T+A ANM LL LSS+ALVLPTP +   E+ D  +L VSR + VFLL MY QLL+FQ  TH  +F N    DE    + ++ ++ GL V T LVA  S FLVD+IDGFTE + +S++FVG++L+PI+GNAVEHITA+TVA K K++L
Sbjct:  105 PLASILGDFTEELALHTNDTIGGLINASFGNAVEVVVAINALLAGEIRVVQGSLLGSIFSNLLLVLGSCFFFGGLRHQEQSFNATAASANMGLLALSSIALVLPTPFAEYYELHDEQVLMVSRLAAVFLLCMYAQLLVFQLHTHTNIFQNEEGEDEQSARVSMTVAVFGLLVTTLLVALFSNFLVDSIDGFTEASGISRTFVGIVLIPIVGNAVEHITAVTVAMKNKMDL 334          
BLAST of mRNA_E-fasciculatus_F_contig12415.1859.1 vs. uniprot
Match: A0A7S1USB3_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1USB3_9STRA)

HSP 1 Score: 270 bits (691), Expect = 1.580e-84
Identity = 141/228 (61.84%), Postives = 183/228 (80.26%), Query Frame = 1
Query:    1 PLASILGDFTEEVSAHTNQTLGGLIQATLGNAVEIVVSIQALYANQIRVVQASLLGSVFSNMLLVLGCCFFFGGLKHKEQRFNSTSAIANMSLLLLSSLALVLPTPLSHVSEMGD--LLTVSRFSGVFLLIMYVQLLIFQFKTHAYLFANT-DEDGTNLKLSTSLVGLAVITGLVAWLSEFLVDAIDGFTEEARLSKSFVGLILLPIIGNAVEHITAITVATKVKVNL 675
            PLASILGDFTEEV+AHTNQ +GGLI AT GNAVE+VV++QAL AN+IRVVQAS++GS+FSN+LLVLG CFF GGL HKEQ FN+T+A ANM+LL LSS+ALVLPTP ++  E+ D  +L +SR + +FL+ MY+QLL+FQ KTH +LF    DE G  L +  S+ GL + T L+   S++LV++IDGF   + +S++FVGLI+LPI+GNAVEHITA+TVA K K++L
Sbjct:  258 PLASILGDFTEEVAAHTNQVIGGLINATFGNAVEVVVAVQALLANEIRVVQASMIGSIFSNLLLVLGGCFFMGGLVHKEQEFNATAATANMALLALSSVALVLPTPFANYYEVEDEQVLRISRVAAIFLMFMYLQLLVFQLKTHTFLFEEDGDEGGARLSMVISMSGLCITTLLITIFSDYLVESIDGFCSSSGVSRTFVGLIILPIVGNAVEHITAVTVAMKNKMDL 485          
BLAST of mRNA_E-fasciculatus_F_contig12415.1859.1 vs. uniprot
Match: A0A7S3KYE4_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3KYE4_9STRA)

HSP 1 Score: 267 bits (683), Expect = 5.010e-84
Identity = 143/231 (61.90%), Postives = 182/231 (78.79%), Query Frame = 1
Query:    1 PLASILGDFTEEVSAHTNQTLGGLIQATLGNAVEIVVSIQALYANQIRVVQASLLGSVFSNMLLVLGCCFFFGGLKHKEQRFNSTSAIANMSLLLLSSLALVLPTPLSHVSEMGD--LLTVSRFSGVFLLIMYVQLLIFQFKTHAYLF-ANTDEDG---TNLKLSTSLVGLAVITGLVAWLSEFLVDAIDGFTEEARLSKSFVGLILLPIIGNAVEHITAITVATKVKVNL 675
            PLASILGDFTEEV+ HTN+T+GGLI AT GNAVE+VV+IQAL AN+IRVVQ+S+LGS+FSN+LLVLG CFFFGGLK+  Q FN+T+A ANM LL LS++ALVLPTP +H  +M D  +L +SRFS +FL+ MY QLL+FQ  THA  F A   EDG    N+     ++GL V T LV   S++LV++IDGFT  + +S++FVG++LLPI+GNAVEH+TAITVA K K++L
Sbjct:  180 PLASILGDFTEEVALHTNETIGGLINATFGNAVEVVVAIQALLANEIRVVQSSMLGSIFSNLLLVLGGCFFFGGLKYPNQSFNATAATANMGLLALSAIALVLPTPFAHYYDMHDDRVLLISRFSAIFLMFMYAQLLVFQLHTHANAFTAEGGEDGKELANMSFGMGILGLLVCTLLVTIFSDYLVESIDGFTTASGISRTFVGIVLLPIVGNAVEHVTAITVARKDKMDL 410          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig12415.1859.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FIN5_ECTSI8.940e-13894.67Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835ZBG0_9STRA1.890e-10270.67Sodium/calcium exchanger protein-domain-containing... [more]
A0A7S4W0D3_9STRA3.260e-9263.88Hypothetical protein n=2 Tax=Ditylum brightwellii ... [more]
A0A7S1ZP93_TRICV1.130e-8862.56Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]
A0A8J9TFQ4_PHATR5.490e-8862.45Hypothetical protein n=2 Tax=Phaeodactylum tricorn... [more]
A0A1Z5KS18_FISSO7.930e-8863.32Ca2+:H+ antiporter n=2 Tax=Fistulifera solaris Tax... [more]
A0A7S2V7W0_9STRA3.460e-8664.04Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A1Z5KRG5_FISSO8.800e-8561.74Ca2+:H+ antiporter n=2 Tax=Fistulifera solaris Tax... [more]
A0A7S1USB3_9STRA1.580e-8461.84Hypothetical protein n=1 Tax=Grammatophora oceanic... [more]
A0A7S3KYE4_9STRA5.010e-8461.90Hypothetical protein n=1 Tax=Amphora coffeiformis ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig12415contigE-fasciculatus_F_contig12415:578..4001 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score400.2
Seed ortholog evalue6.3e-109
Seed eggNOG ortholog2880.D7FIN5
Preferred nameVCX1
KEGG koko:K07300,ko:K08286,ko:K11699,ko:K12619,ko:K20404
KEGG TC2.A.19
KEGG Pathwayko03008,ko03018,ko04150,map03008,map03018,map04150
GOsGO:0000322,GO:0000323,GO:0000324,GO:0000329,GO:0003674,GO:0005215,GO:0005451,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005773,GO:0005774,GO:0006810,GO:0006811,GO:0006812,GO:0006813,GO:0006816,GO:0006873,GO:0006874,GO:0006875,GO:0007034,GO:0008150,GO:0008324,GO:0009987,GO:0015075,GO:0015077,GO:0015078,GO:0015079,GO:0015085,GO:0015291,GO:0015297,GO:0015298,GO:0015299,GO:0015318,GO:0015368,GO:0015369,GO:0015386,GO:0015491,GO:0015672,GO:0016020,GO:0016021,GO:0019725,GO:0022804,GO:0022821,GO:0022857,GO:0022890,GO:0030001,GO:0030003,GO:0031090,GO:0031224,GO:0034220,GO:0034486,GO:0042592,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044422,GO:0044424,GO:0044425,GO:0044437,GO:0044444,GO:0044446,GO:0044464,GO:0046873,GO:0048878,GO:0050801,GO:0051139,GO:0051179,GO:0051234,GO:0055065,GO:0055074,GO:0055080,GO:0055082,GO:0055085,GO:0060401,GO:0065007,GO:0065008,GO:0070588,GO:0070838,GO:0071804,GO:0071805,GO:0072503,GO:0072507,GO:0072511,GO:0098588,GO:0098655,GO:0098660,GO:0098662,GO:0098771,GO:0098805,GO:0098852,GO:0099516,GO:0140146,GO:1901660,GO:1902600
EggNOG free text desc.calcium:proton antiporter activity
EggNOG OGsCOG0387@1,KOG1397@2759
EC2.7.7.48
COG Functional cat.P
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko02000,ko03009,ko03016,ko03019,ko03021,ko03036
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionCalcium/proton exchanger CAX
Ec32 orthologEc-27_000430.1
Exons5
Model size675
Cds size675
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig12415.1859.1prot_E-fasciculatus_F_contig12415.1859.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalepolypeptideE-fasciculatus_F_contig12415 578..4001 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927747.887807-CDS-E-fasciculatus_F_contig12415:577..6851622927747.887807-CDS-E-fasciculatus_F_contig12415:577..685Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12415 578..685 -
1695995678.0702019-CDS-E-fasciculatus_F_contig12415:577..6851695995678.0702019-CDS-E-fasciculatus_F_contig12415:577..685Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12415 578..685 -
1622927747.9607391-CDS-E-fasciculatus_F_contig12415:1117..12701622927747.9607391-CDS-E-fasciculatus_F_contig12415:1117..1270Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12415 1118..1270 -
1695995678.0811372-CDS-E-fasciculatus_F_contig12415:1117..12701695995678.0811372-CDS-E-fasciculatus_F_contig12415:1117..1270Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12415 1118..1270 -
1622927747.9752555-CDS-E-fasciculatus_F_contig12415:2454..25351622927747.9752555-CDS-E-fasciculatus_F_contig12415:2454..2535Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12415 2455..2535 -
1695995678.0894275-CDS-E-fasciculatus_F_contig12415:2454..25351695995678.0894275-CDS-E-fasciculatus_F_contig12415:2454..2535Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12415 2455..2535 -
1622927748.0195103-CDS-E-fasciculatus_F_contig12415:2935..31151622927748.0195103-CDS-E-fasciculatus_F_contig12415:2935..3115Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12415 2936..3115 -
1695995678.0975811-CDS-E-fasciculatus_F_contig12415:2935..31151695995678.0975811-CDS-E-fasciculatus_F_contig12415:2935..3115Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12415 2936..3115 -
1622927748.0409076-CDS-E-fasciculatus_F_contig12415:3848..40011622927748.0409076-CDS-E-fasciculatus_F_contig12415:3848..4001Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12415 3849..4001 -
1695995678.1056921-CDS-E-fasciculatus_F_contig12415:3848..40011695995678.1056921-CDS-E-fasciculatus_F_contig12415:3848..4001Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12415 3849..4001 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-fasciculatus_F_contig12415.1859.1

>prot_E-fasciculatus_F_contig12415.1859.1 ID=prot_E-fasciculatus_F_contig12415.1859.1|Name=mRNA_E-fasciculatus_F_contig12415.1859.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=225bp
PLASILGDFTEEVSAHTNQTLGGLIQATLGNAVEIVVSIQALYANQIRVV
QASLLGSVFSNMLLVLGCCFFFGGLKHKEQRFNSTSAIANMSLLLLSSLA
LVLPTPLSHVSEMGDLLTVSRFSGVFLLIMYVQLLIFQFKTHAYLFANTD
EDGTNLKLSTSLVGLAVITGLVAWLSEFLVDAIDGFTEEARLSKSFVGLI
LLPIIGNAVEHITAITVATKVKVNL
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mRNA from alignment at E-fasciculatus_F_contig12415:578..4001-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-fasciculatus_F_contig12415.1859.1 ID=mRNA_E-fasciculatus_F_contig12415.1859.1|Name=mRNA_E-fasciculatus_F_contig12415.1859.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=3424bp|location=Sequence derived from alignment at E-fasciculatus_F_contig12415:578..4001- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
CCCCTCGCCAGCATTCTGGGAGACTTCACGGAGGAGGTGTCGGCGCACAC CAACCAGACGCTCGGCGGGCTCATCCAGGCGACGCTGGGAAACGCGGTCG AGATTGTGGTGTCCATCCAGGCTCTCTATGCGAATCAGATTCGGGTGGTA CAGGTGCGTTGCCCGGGGAGTCCAAGGGTGTGTAGGGGGGTGTTTATTTA GTCCGCTTTTACCGGAAGCGAAAATACGCTGTTTGGCGTCGGCGGGTAAA CATGAGACCGCTCCGAACGCGGCTTGAGGCACGGAAGAGTGGCCGGCAGG CACCCAGAATATGCCAAAACGAAAAAGAAGCCTCTACAAACGCTTTGGCG GAGGGAGGCAAACACCGTGGCTCACGAAAGCTTGTGATCTTTGCTCGCGT GGACTGCTCGTGACAAGTGGCTGGGAAAAAAGACTCTAATAGACGGGAGA GAGACGGCGGTTGTGTAGTCTGGTGTGAGTTGCGTTGTTTGTTTCGTCCC ATCTGTGCTGGGCGCCTCTGATCTTGGTTGTGTGTTTCTCTACTCACTCC GAGTAGTTAGAATCGACCGCGCCAGTCGGCTGACCAATGAGAACAGGTCA GTCTTAGACTGTATGTAGACTGTATCGTTTTGCTTACAACAGCAGTGAAA TCGGCCAGCGGTGTGACTTAACCGCGGGAATTATGTAGTTCGATGCATGG TTTAGTGGAAGAGGAGGAAGCTACTCGGCAGAGGTTGGGACGTTTTTCAG TATAAAGATTAGAAGCATAGTAGCAGCAGCAGCAGCAGCAGCAGCAGCAA CAATATACCAACACCTAATATGACCACCACCACCACCAACATCTAATATG CATCTCTCTGTCTCTCTACCTGCTTGCTACCACAAGGCTTCGTTGCTCGG ATCGGTGTTCTCGAACATGCTGCTGGTCCTCGGCTGCTGTTTCTTCTTCG GCGGGCTCAAGCACAAGGAGCAGCGCTTCAACTCCACCAGCGCGATCGCC AACATGAGCCTGCTCCTGCTTTCCTCGCTGGCCCTGGTCCTGCCGACACC TCTTTCGCACGTATCGGTCAGTCAGTCACTTCACTTCAGTCGAGAAAATC GTTGCGCTGTTGGTGGCTGCAGCGTAATACTCGTGCATCTCTTGAGCATG GCCTTCTGTGTGTGGATGACGAATGTGAAAACCACCACCGGCTGTCGGTT TGTTTTGGGGTGTAGTGACCGACTTGCGGGTGAATTGACTGCCTTGACAC ACTAACGTGAGCGATGTAAATGCGTGTGATATTTTGTTGTCGCCGTGATG TTGGTGTGCATCTGCTGCGTCCGTGCGTCATACTGCCCCGCCTGTCAGGT TTTCTTCCACTTTGTCTGCTCCGTTAATTCAATTGTGCCTGTCTCGCGCA ATACAGTGGTTGTAGTGATATGGAGTTTTTTGTTTTTTCCCTGTTTTTTT CTTGTTGTTTTGGCAGGAAATGGGAGATTTGCTGACAGTCTCGCGGTTCT CGGGAGTGTTCCTGCTCATCATGTACGTGCAGCTCCTCATCTTTCAGGTG AGTTTTTCGCCACTGGGTTGTCCTTCCTTCCCCGCCTGAGAGGGGATCGA AGCACTACTGAAACGCAATGCCTGTTTGCGAGAGAGAGAGTGATGGTACT TGAGCAACGGACGCAAGCTGCTCCGCCTGTTTCTCCGAGGCATGCAAACG AGGATGGGTGCTCAAGCAAGGATATCTCTTTGTGGTCGTCCGGCCACAGT CGCCCGGCCACGACGAGATATCCTTGCTTGAGCATCCATCCTCGTTTGCA TGCCTCGGATAAACAAGGGAGACAGCTTGCGTCCGTTGCTGAAGTGCATG AACACGCGCACGGTGCGCTGCTCCTTCCATGAGATCCCGCGCTCTACAAG GTTTGCTGTGAAAGCGGCAGGCATCCCATGCCTGTTGCGGGGCGGGAGTG GTGTGTGTGACTTGAGCATCGGACGTCCAACCGAGCATGCTCAAGCAAGG ACATCCCTTCGGGCGAAAAAGAAAACGGCAGCTCTAGGGCGGAACAGCGC ACCGTGTGTGTGTTCATGAGCTCCACCAACGGACGCAAGTTGCCTCCCCT ATTTATCCGAGGCATGCAAACGAGGATGGGTGCTCAATCAAACAAGGTCT TCTCTTTGGGGCGCCCCGAAGATACAGTCCTTGCTTGATTGAGCATCCAT CGACGTTCGCACGTCAGGTTGAAACAGGCGAGACAGCTTGCTTCGTTGCT GAAACACATTGACTCACACACACACATCCTGCTGTTCGTATTTTTTATTC CCGCTTGATTTCACACCCACCCACGCTTTATCATCTGGCCGCCGACACGT TTTTTCAATGCTCACCCTTTTTTTTCTGGTTTTTTTCCTTACAGTTCAAG ACCCACGAGCCCGTCCCCTTTGTGTTTCGTCCCGCTTCATGCACAACCAC GTTAATCATCTGGCTGCCAACACGAGGTTTCCGTTTTTTGTTTGCTTGCA GTTCAAGACCCGCGCCTATCTGTTCGCGAACATCGACGCCTGCTTAAGTT CACTGACGATCGTCATATGCGCCACCACATTTAGTCTTGACCCCCGTTTT TTTTTTTTCTTACAGAGTTTTAGACCCACCCCTATCTGTTCGCCAATACC GCTGCCCGCTGAACTTCACACCCACGCTCTATCATCTGGCTGCCTACATG TTTATTTTTCTTTTTTTTTTTTCTTTTGCAGTTCAAGACCCACGCCTACC TGTTCGCCAACACCGATGAGGACGGCACGAATCTCAAGCTGAGCACGTCG CTCGTGGGCCTGGCGGTGATCACGGGCCTCGTGGCTTGGCTGTCGGAGTT CCTGGTAGACGCCATCGACGGTTTCACGGAGGAGGTAAGCATATGCGCAT TGTTTTCTTGGTTTGGGTGTGCAGACATCCGTGCACTGAACAAAGTGGCG GTATTTCGTAGGCCAGCAGGTTAGCGCGGTCGATGCTAGTACAACAACAC ATATTGCACACATGCATGGGTTCATGTGCGTTGGGATGGAACGGGGAAAT CTCCGTTTATATGGGAGAGAAAAGGTCTTCCTCTGCCGTGTAAGGTCATT AGTTTTGGGTAGAGTTGGCCATACTTCGGGCTGGTCCTCGCACGTCGTTC AGGTGGTAAATTACTTCCCTGTCACCGGCAGATCTGCCACTGGTGACTTG CTTGTACATCAATCCTCTTGGAGATCCCCCCTACATCCCTGCTATTCTGC ACGGTATTTCCTGACCCTGCTCTACCTCTTTTATCTTTCTACGGCCGCCG CGCTTGGCGCGAAAAGGCACGCCTGTCCAAGTCGTTCGTGGGCCTAATCC TGCTGCCAATCATCGGGAACGCTGTGGAGCACATCACGGCCATCACGGTG GCCACGAAGGTAAAAGTGAATCTT
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Coding sequence (CDS) from alignment at E-fasciculatus_F_contig12415:578..4001-

>mRNA_E-fasciculatus_F_contig12415.1859.1 ID=mRNA_E-fasciculatus_F_contig12415.1859.1|Name=mRNA_E-fasciculatus_F_contig12415.1859.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1350bp|location=Sequence derived from alignment at E-fasciculatus_F_contig12415:578..4001- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
CCCCTCGCCAGCATTCTGGGAGACTTCACGGAGGAGGTGTCGGCGCACAC
CAACCAGACGCTCGGCGGGCTCATCCAGGCGACGCTGGGAAACGCGGTCG
AGATTGTGGTGTCCATCCAGGCTCTCTATGCGAATCAGATTCGGGTGGTA
CAGCCCCTCGCCAGCATTCTGGGAGACTTCACGGAGGAGGTGTCGGCGCA
CACCAACCAGACGCTCGGCGGGCTCATCCAGGCGACGCTGGGAAACGCGG
TCGAGATTGTGGTGTCCATCCAGGCTCTCTATGCGAATCAGATTCGGGTG
GTACAGGCTTCGTTGCTCGGATCGGTGTTCTCGAACATGCTGCTGGTCCT
CGGCTGCTGTTTCTTCTTCGGCGGGCTCAAGCACAAGGAGCAGCGCTTCA
ACTCCACCAGCGCGATCGCCAACATGAGCCTGCTCCTGCTTTCCTCGCTG
GCCCTGGTCCTGCCGACACCTCTTTCGCACGTATCGGCTTCGTTGCTCGG
ATCGGTGTTCTCGAACATGCTGCTGGTCCTCGGCTGCTGTTTCTTCTTCG
GCGGGCTCAAGCACAAGGAGCAGCGCTTCAACTCCACCAGCGCGATCGCC
AACATGAGCCTGCTCCTGCTTTCCTCGCTGGCCCTGGTCCTGCCGACACC
TCTTTCGCACGTATCGGAAATGGGAGATTTGCTGACAGTCTCGCGGTTCT
CGGGAGTGTTCCTGCTCATCATGTACGTGCAGCTCCTCATCTTTCAGGAA
ATGGGAGATTTGCTGACAGTCTCGCGGTTCTCGGGAGTGTTCCTGCTCAT
CATGTACGTGCAGCTCCTCATCTTTCAGTTCAAGACCCACGCCTACCTGT
TCGCCAACACCGATGAGGACGGCACGAATCTCAAGCTGAGCACGTCGCTC
GTGGGCCTGGCGGTGATCACGGGCCTCGTGGCTTGGCTGTCGGAGTTCCT
GGTAGACGCCATCGACGGTTTCACGGAGGAGTTCAAGACCCACGCCTACC
TGTTCGCCAACACCGATGAGGACGGCACGAATCTCAAGCTGAGCACGTCG
CTCGTGGGCCTGGCGGTGATCACGGGCCTCGTGGCTTGGCTGTCGGAGTT
CCTGGTAGACGCCATCGACGGTTTCACGGAGGAGGCACGCCTGTCCAAGT
CGTTCGTGGGCCTAATCCTGCTGCCAATCATCGGGAACGCTGTGGAGCAC
ATCACGGCCATCACGGTGGCCACGAAGGTAAAAGTGAATCTTGCACGCCT
GTCCAAGTCGTTCGTGGGCCTAATCCTGCTGCCAATCATCGGGAACGCTG
TGGAGCACATCACGGCCATCACGGTGGCCACGAAGGTAAAAGTGAATCTT
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