mRNA_E-fasciculatus_F_contig12413.1858.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig12413.1858.1 vs. uniprot
Match: D8LDK8_ECTSI (Putative lipase n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDK8_ECTSI) HSP 1 Score: 425 bits (1093), Expect = 2.000e-147 Identity = 199/244 (81.56%), Postives = 226/244 (92.62%), Query Frame = 1
Query: 82 MKPDLNTAKFSAQNAYFFASLCKMAYQPEQQVKGLVKGNSTNEGLGFDRFHWFDADKAAKRSVFDNIEDTEAFVAANDDLIAVVFRGTKEMTDWATNIDMNPRACAEVWGAPAAPGDVHEGFNEGVESVWDVRGNMRKVIQNLYNEKGKNRKLYIAGHSLGGALATVAAARLSYVDNLDIAGIYTIGSPKLLGRSAAAGFDARLNDGTPLKDKYFRCRNNNDVVTRVP--PGYNHVGTEIYLDR 807
MKP+LNT KFS QNA++FASLCK+AY+PEQ+ KGLVKGNSTN+GLGFDRFHWFDAD+AAKRS FD I+DTEAFVAANDD++AVVFRGTKE+TDWATN+D++PR CAE W AP A G VHEGFNEGV+SVW+VRGNMRKVI+NLYNEKGK+RKLYIAGHSLGGALATVAAARLSY+DNLDIAG+YTIGSP+L SAAAGFD+R+NDGTPLK+KYFRCRNNND+VTR+P P Y HVGTEIYLDR
Sbjct: 1 MKPNLNTTKFSTQNAFYFASLCKIAYKPEQEAKGLVKGNSTNDGLGFDRFHWFDADEAAKRSSFDAIQDTEAFVAANDDMVAVVFRGTKELTDWATNLDISPRDCAEQWEAPDAVGAVHEGFNEGVDSVWEVRGNMRKVIKNLYNEKGKDRKLYIAGHSLGGALATVAAARLSYIDNLDIAGVYTIGSPRLFDPSAAAGFDSRMNDGTPLKEKYFRCRNNNDIVTRIPLPPSYEHVGTEIYLDR 244
BLAST of mRNA_E-fasciculatus_F_contig12413.1858.1 vs. uniprot
Match: A0A6H5JMK4_9PHAE (Lipase_3 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JMK4_9PHAE) HSP 1 Score: 290 bits (742), Expect = 1.110e-92 Identity = 146/271 (53.87%), Postives = 188/271 (69.37%), Query Frame = 1
Query: 13 FARSDAVPAMPQRTTSAPIVKVEMKPDLNTAKFSAQNAYFFASLCKMAYQPEQQVKGLVKGNSTNEGLGFDRFHWFDADKAAKRSVFDNIEDTEAFVAANDDLIAVVFRGTKEMTDWATNIDMNPRACAEVWGAPAAPGDVHEGFNEGVESVW-----DVRGNMRKVIQNLYNEKGKNRKLYIAGHSLGGALATVAAARLSYVDNLDIAGIYTIGSPKLLGRSAAAGFDARLNDGTPLKDKYFRCRNNNDVVTRVPPG-YNHVGTEIYLDR 807
F ++A+P + + +P +V MKPDL+ FSA NA+FFA L K+AY E + +GL+ GN+T GLGFDRFHWF+ + A+++ F N+ DT+AFVAA+DD+IAVVFRGT + DW TN + P+ C + W P G VH GF++ V +VW M + I +LYNEKGKNRKL+ AGHSLGGALAT AAAR++++D+LDIAGIYTIGSP+L R A FD R N G LK+KYFRCRNN D V VP Y HVGTEIY+D+
Sbjct: 72 FDPTNAMPPHTWKISRSP--EVNMKPDLSAKGFSALNAFFFAGLSKIAYASEDEARGLLVGNATERGLGFDRFHWFEGGEEARKNPFGNLHDTDAFVAASDDIIAVVFRGTMGIADWYTNAKVQPKKCPQEWRVPPPGGTVHTGFDDAVGTVWLSTPSGQPTGMYQAIMDLYNEKGKNRKLFFAGHSLGGALATNAAARVAFIDDLDIAGIYTIGSPRLFNRVAGRHFDGRPNGGKTLKEKYFRCRNNKDPVPTVPKRPYVHVGTEIYIDK 340
BLAST of mRNA_E-fasciculatus_F_contig12413.1858.1 vs. uniprot
Match: A0A6H5KWV7_9PHAE (Lipase_3 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KWV7_9PHAE) HSP 1 Score: 285 bits (728), Expect = 3.820e-91 Identity = 139/256 (54.30%), Postives = 187/256 (73.05%), Query Frame = 1
Query: 58 SAPIVKVEMKPDLNTAKFSAQNAYFFASLCKMAYQPEQQVKGLVKGNSTNEGLGFDRFHWFDADKAAK-RSVFDNIEDTEAFVAANDDLIAVVFRGTKEMTDWATNIDMNPRACAEVWGAPAAPGDVHEGFNEGVESVWDVRG----NMRKVIQNLYNEKGKNRKLYIAGHSLGGALATVAAARLSYVDNLDIAGIYTIGSPKLLGRSAAAGFDARLNDGTPLKDKYFRCRNNNDVVTRVP-PGYNHVGTEIYLDR 807
SAP+ +VE+KPD+ FSAQN +FF+ + K+ Y P +V+ ++G +GLG++ FHWF+AD A S++D I+DTEAFVAANDD+I VVFRG+ E+TDW TN ++ R W DVH+GF++ VE+VW+ MR +I+ L E+GK+RKLY+AGHSLGGALATVAAARL+++D++ I+GIYTIGSP++ G + A F+A++NDGT +KDKYFRCRNNND+VTR P Y HVGTEIY DR
Sbjct: 51 SAPVSEVELKPDVKATSFSAQNGFFFSKMSKLVYSPRIEVESAMQGK---DGLGYEHFHWFEADPAVSGASIWDRIQDTEAFVAANDDVILVVFRGSSELTDWTTNFNLVRRLVPSDWLLDGLGCDVHQGFDDAVETVWNPGSAHPSGMRNIIKTLCKEEGKHRKLYLAGHSLGGALATVAAARLAFMDDVKISGIYTIGSPRVFGENMADRFNAKMNDGTRMKDKYFRCRNNNDLVTRGPLRPYKHVGTEIYFDR 303
BLAST of mRNA_E-fasciculatus_F_contig12413.1858.1 vs. uniprot
Match: A0A6H5L4H8_9PHAE (Lipase_3 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L4H8_9PHAE) HSP 1 Score: 245 bits (625), Expect = 5.460e-76 Identity = 129/270 (47.78%), Postives = 170/270 (62.96%), Query Frame = 1
Query: 31 VPAMPQRTTSAPIVKVEMKPDLNTAKFSAQNAYFFASLCKMAYQPEQQVKGLVK-----GNSTNEGLGFDRFHWFDA-DKAAKRSVFDNIEDTEAFVAANDDLIAVVFRGTKEMTDWATNIDMNPRACAEVWGAPAAPGDVHEGFNEGVESVWDVRGN----MRKVIQNLYNEKGKNRKLYIAGHSLGGALATVAAARLSYVDNLDIAGIYTIGSPKLLGRSAAAGFDARLNDGTPLKDKYFRCRNNNDVVTRVPPG-YNHVGTEIYLDR 807
VP +P + +VE K D + FS QNAYF A + + YQ + +V+ ++ G G D F WF+A D+ RS FD I DTEAFVAAND I V FRG+ DW TN + PR + W GD+H GF++GV +VW+ M VI+ Y+E+G++RKLYI GHSLGGALAT+AAARL +VD+L++A +YTIGSP++ AA FD++ N GT +KDKYFRCRNNND+V+ +PP Y HVGTE+Y DR
Sbjct: 11 VPIVPVYSAGDAEEEVEFKLDNDATAFSEQNAYFLARMSDLCYQSKDEVRSALETLSFWGKGAAAG---DNFQWFEANDEVVDRSSFDPIHDTEAFVAANDGAIVVAFRGSSGGRDWLTNFSILPRDIPKDWKLETTDGDLHRGFDDGVNTVWNPGPGHPEGMLAVIKRFYHEEGRSRKLYITGHSLGGALATIAAARLVFVDDLNVAALYTIGSPRVFDSEVAAIFDSKTNHGTRMKDKYFRCRNNNDIVSCIPPSPYKHVGTEVYFDR 277
BLAST of mRNA_E-fasciculatus_F_contig12413.1858.1 vs. uniprot
Match: D8LDL1_ECTSI (Lipase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDL1_ECTSI) HSP 1 Score: 171 bits (432), Expect = 4.990e-48 Identity = 93/168 (55.36%), Postives = 117/168 (69.64%), Query Frame = 1
Query: 241 DADKAAK-RSVFDNIEDTEAFVAANDDLIAVVFRGTKEMTDWATNIDMNPRACAEVWGAPAAPGDVHEGFNEGVESVW--DVRGNMRKVIQNLYNEKGKNRKLYIAGHSLGGALATVAAARLSYVDNLDIAGIYTIGSPK-----------LLGRSAAAGFDARLNDG 702
+AD A RS+ D I DTEAFV ANDD+I VVFRGT+E+TDW TN++M R+ W D+H GF++GV++VW + M + I+NLYNE GK+RKLYIAGHSLGGALAT+AAARLS+VD+++IAGIYTIGSP+ LLGR +A F L DG
Sbjct: 59 EADPAVSGRSILDAIHDTEAFVTANDDMIVVVFRGTQELTDWTTNLNMGLRSARNEWKIDLEGCDLHRGFDDGVDTVWLPSSKNGMYQTIKNLYNEHGKSRKLYIAGHSLGGALATIAAARLSFVDDMNIAGIYTIGSPRGAISTSNVWDRLLGRMSAL-FRGELIDG 225
BLAST of mRNA_E-fasciculatus_F_contig12413.1858.1 vs. uniprot
Match: UPI0016886C83 (Lipase family protein n=2 Tax=Leptolyngbya sp. FACHB-261 TaxID=2692806 RepID=UPI0016886C83) HSP 1 Score: 138 bits (347), Expect = 2.500e-35 Identity = 89/235 (37.87%), Postives = 126/235 (53.62%), Query Frame = 1
Query: 109 FSAQNAYFFASLCKMAYQPEQQVKGLVKGNSTNEGLGFDRFHWFDADKAAKRSVFDNIEDTEAFVAANDDLIAVVFRGTKEMTDWATNIDMNPRACAEVWGAPAAPGDVHEGFNEGVESVWDVRGNMRKVIQNLYNEKGKNRKLYIAGHSLGGALATVAAARLSYVDNLDIAGIYTIGSPKLLGRSAAAGFDARLNDGTPLKDKYFRCRNNNDVVTRVPP---GYNHVGTEIYLD 804
+S NA+ A ++AY + K GF + +R F +DT+AFVAAND ++ + FRGT + DWATNI + + ++ G VHEGF E ++ VW +V+ L + KN+ L+I GHSLGGALAT+A ARL + +AG+YT GSP+ + + A F+ K + FR +NNDVVTRVPP GY+HVGT +Y+D
Sbjct: 53 YSPINAFCLAKAAQLAYSDSPAIDAQTKL------WGFTK----------ERVRFCEDQDTQAFVAANDQIVVLSFRGTTDRNDWATNIGVAFKEETKI-------GKVHEGFLEALDCVWP------RVMTTLDAFQDKNQSLWITGHSLGGALATLATARLRFGLKRPVAGLYTFGSPRAVDEAFADTFNH------DFKAQTFRLVHNNDVVTRVPPRSFGYSHVGTFLYID 252
BLAST of mRNA_E-fasciculatus_F_contig12413.1858.1 vs. uniprot
Match: UPI00068A2657 (lipase family protein n=1 Tax=Endozoicomonas numazuensis TaxID=1137799 RepID=UPI00068A2657) HSP 1 Score: 132 bits (333), Expect = 2.710e-33 Identity = 90/267 (33.71%), Postives = 132/267 (49.44%), Query Frame = 1
Query: 37 AMPQRTTSAPIVKVEMKPDLNTAKFSAQNAYFFASLCKMAYQPEQQVKGLVKGNSTNEGLGFDRFHWFDADKAAKRSVFDNIEDTEAFVAANDDLIAVVFRGTK-EMTDWATNIDMNPRACAEVWGAPAAPGDVHEGFNEGVESVWDVRGNMRKVIQNLYNEKGKNRKLYIAGHSLGGALATVAAARLSYVDNLDIAGIYTIGSPKLLGRSAAAGFDARLNDGTP------LKDKYFRCRNNNDVVTRVPP---GYNHVGTEIYLDR 807
A+P RT+S K+ + + FS N AS +AY+ Q++ +++ N G D F + D D + F+ + + I + FRGT+ + DW+ N D+ E W G VH GF EG++SVW + + L + ++ ++I GHSLGGALAT+AAA L + +NL +AG+Y+ G P+L R F ++ P L + FRC NN D+VTRVPP GY HVG IY D
Sbjct: 2 AIPSRTSS----KIARRFNHKARGFSKVNMACLASCSNIAYRTSDQIRQVLEFEGFNLS-GQDVFFEYRKDSMNP--------DIQGFIVGDSNKIIISFRGTESKFQDWSLNFDI----MREDWTPENNLGSVHRGFVEGLDSVWTT------IKERLTRLRNNHQSIWITGHSLGGALATLAAATLEFQENLPVAGVYSFGQPRLGNREFYRNFHDSEHNSAPNLFEKSLGKRTFRCVNNCDLVTRVPPQITGYRHVGHLIYFDH 245
BLAST of mRNA_E-fasciculatus_F_contig12413.1858.1 vs. uniprot
Match: UPI000375BB5B (lipase family protein n=1 Tax=Pseudanabaena sp. PCC 6802 TaxID=118173 RepID=UPI000375BB5B) HSP 1 Score: 127 bits (320), Expect = 6.600e-32 Identity = 81/241 (33.61%), Postives = 121/241 (50.21%), Query Frame = 1
Query: 97 NTAKFSAQNAYFFASLCKMAYQPEQQVKGLVKGNSTNEGLGFDRFHWFDADKAAKRSVFDNIEDTEAFVAANDDLIAVVFRGTKEMTDWATNIDMNPRACAEVWGAPAAPGDVHEGFNEGVESVW-DVRGNMRKVIQNLYNEKGKNRKLYIAGHSLGGALATVAAARLSYVDNLDIAGIYTIGSPKLLGRSAAAGFDARLNDGTPLKDKYFRCRNNNDVVTRVPP---GYNHVGTEIYLDR 807
NT ++ QNA + ++ Y + ++ + GF +F +FD E T+AF AND+L V RG++E+ DW TN N + G G VH+GFN+ + V+ D+R Q + + K + L+ GHSLGGALAT+A A+L Y ++ + G+YT G P RS F+ N K + FR N+ND+V+R+PP Y+HVGT +Y D
Sbjct: 9 NTTRYEPQNALWLGQSARLVYSDSKTIQ------AETATWGFSKFRFFDK------------EGTQAFAIANDELAIVALRGSEEVIDWVTNAKFN---LVDGMG-----GKVHQGFNQALTLVYADIR-------QTITEFQDKGQSLWFTGHSLGGALATLAVAKLRYEEDKPVYGLYTYGQP----RSGDRNFERIFN--ADFKSRTFRFVNHNDIVSRIPPRSLSYSHVGTFLYFDE 210
BLAST of mRNA_E-fasciculatus_F_contig12413.1858.1 vs. uniprot
Match: A0A1V4AQB0_9BACT (Lipase_3 domain-containing protein n=1 Tax=Candidatus Brocadia caroliniensis TaxID=1004156 RepID=A0A1V4AQB0_9BACT) HSP 1 Score: 127 bits (319), Expect = 8.420e-32 Identity = 81/240 (33.75%), Postives = 125/240 (52.08%), Query Frame = 1
Query: 97 NTAKFSAQNAYFFASLCKMAYQPEQQVKGLVKGNSTNEGLGFDRFHWFDADKAAKRSVFDNIEDTEAFVAANDDLIAVVFRGTKEMTDWATNIDMNPRACAEVWGAPAAPGDVHEGFNEGVESVWDVRGNMRKVIQNLYNEKGKNRKLYIAGHSLGGALATVAAARLSYVDNLDIAGIYTIGSPKLLGRSAAAGFDARLNDGTPLKDKYFRCRNNNDVVTRVP---PGYNHVGTEIYLDR 807
NT +S +NAY+ + ++AY+ E ++ + + GF+ F +++ K DT+AF+A N +++ + FRGT + DW T+I++ ++ P G VHEGF+ + SVW R + + NE+ K R L+I GHSLG ALAT+A A+L + + G+YT G P+ R FDA T FR NND+V R+P Y+HVGT Y+D+
Sbjct: 9 NTRNYSLENAYWLSRASQLAYENESKISQGI------QAWGFNDFKYYEHKKL----------DTQAFIAGNQEMLMLAFRGTASLKDWMTDINI------DLINGP--DGKVHEGFSMAISSVW------RDIWSFIRNER-KGRALWITGHSLGAALATLAVAKLRLEKDEPVNGLYTFGQPRTGDREFQKNFDADFVSQT------FRFVYNNDIVARIPFRSMHYSHVGTFKYIDK 211
BLAST of mRNA_E-fasciculatus_F_contig12413.1858.1 vs. uniprot
Match: UPI0007809BBD (lipase family protein n=1 Tax=Endozoicomonas arenosclerae TaxID=1633495 RepID=UPI0007809BBD) HSP 1 Score: 128 bits (322), Expect = 1.010e-31 Identity = 91/260 (35.00%), Postives = 129/260 (49.62%), Query Frame = 1
Query: 64 PIVKVEMKPDLNTAKFSAQNAYFFASLCKMAYQPEQQVKGLVKGNSTNEGLGFDRFHWFDADKAAKRSVFDNIE-DTEAFVAANDDLIAVVFRGTK-EMTDWATNIDMNPRACAEVWGAPAAPGDVHEGFNEGVESVWD-VRGNMRKVIQNLYNEKGKNRKLYIAGHSLGGALATVAAARLSYVDNLDIAGIYTIGSPKLLGRSAAAGFDARLNDGTP------LKDKYFRCRNNNDVVTRVPP---GYNHVGTEIYLDR 807
P K+ + + FS N AS +AY+P ++K ++ N G D F F+ K DN++ D + F+ + I + FRGT+ + DW+ N D+ E W G VH GF EG++SVW ++ + K+ N N+ ++I GHSLGGALA +AAA + +N +AG+YT G P+L R F N+ P L + FRC NN D+VTRVPP GY HVG IY D
Sbjct: 2 PTSKIARRFNHKARGFSRINMACLASCSNIAYRPSDEIKKTLEFEGFNLS-GQDVF--FEYRK-------DNMDPDIQGFIVGDSKKIIISFRGTESKFEDWSLNFDI----MREDWVPNNNLGSVHRGFIEGLDSVWTTIKERLNKLSDN-------NQSIWITGHSLGGALAALAAATIELQENQPVAGVYTFGQPRLGNREFYRNFHDHENNAVPELFEKSLGKRTFRCVNNCDLVTRVPPQITGYRHVGHLIYFDH 240 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig12413.1858.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig12413.1858.1 >prot_E-fasciculatus_F_contig12413.1858.1 ID=prot_E-fasciculatus_F_contig12413.1858.1|Name=mRNA_E-fasciculatus_F_contig12413.1858.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=271bp AQANFARSDAVPAMPQRTTSAPIVKVEMKPDLNTAKFSAQNAYFFASLCKback to top mRNA from alignment at E-fasciculatus_F_contig12413:537..3796+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig12413.1858.1 ID=mRNA_E-fasciculatus_F_contig12413.1858.1|Name=mRNA_E-fasciculatus_F_contig12413.1858.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=3260bp|location=Sequence derived from alignment at E-fasciculatus_F_contig12413:537..3796+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig12413:537..3796+ >mRNA_E-fasciculatus_F_contig12413.1858.1 ID=mRNA_E-fasciculatus_F_contig12413.1858.1|Name=mRNA_E-fasciculatus_F_contig12413.1858.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1626bp|location=Sequence derived from alignment at E-fasciculatus_F_contig12413:537..3796+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |