prot_E-fasciculatus_F_contig1241.1855.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig1241.1855.1
Unique Nameprot_E-fasciculatus_F_contig1241.1855.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length132
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1241.1855.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001611Leucine-rich repeatPFAMPF13855LRR_8coord: 44..102
e-value: 1.0E-7
score: 31.6
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 3..132
e-value: 6.5E-40
score: 138.9
NoneNo IPR availablePANTHERPTHR46662FAMILY NOT NAMEDcoord: 43..132
NoneNo IPR availablePANTHERPTHR46662:SF8coord: 5..64
NoneNo IPR availablePANTHERPTHR46662:SF8coord: 43..132
NoneNo IPR availablePANTHERPTHR46662FAMILY NOT NAMEDcoord: 5..64
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 7..130

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig1241contigE-fasciculatus_F_contig1241:12..1712 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig1241.1855.1mRNA_E-fasciculatus_F_contig1241.1855.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig1241 12..1712 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig1241.1855.1 ID=prot_E-fasciculatus_F_contig1241.1855.1|Name=mRNA_E-fasciculatus_F_contig1241.1855.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=132bp
VFSPSIAGPIPVELGRLAVLAYLDLGANELTGPIPSELGNLGALTTLLLA
FNQLTGHIPPQLGDLGALEELYLFNNKLDGEIPASLGQLVKLETLVLAGN
KLSGEYSIPPELGNLAALEGLYLQGNQLNGPF
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032675LRR_dom_sf
IPR001611Leu-rich_rpt