|
|
Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 5 |
| Model size | 396 |
| Cds size | 396 |
| Stop | 0 |
| Start | 0 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig1241.1855.1 >prot_E-fasciculatus_F_contig1241.1855.1 ID=prot_E-fasciculatus_F_contig1241.1855.1|Name=mRNA_E-fasciculatus_F_contig1241.1855.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=132bp
VFSPSIAGPIPVELGRLAVLAYLDLGANELTGPIPSELGNLGALTTLLLA
FNQLTGHIPPQLGDLGALEELYLFNNKLDGEIPASLGQLVKLETLVLAGN
KLSGEYSIPPELGNLAALEGLYLQGNQLNGPF back to topmRNA from alignment at E-fasciculatus_F_contig1241:12..1712+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_E-fasciculatus_F_contig1241.1855.1 ID=mRNA_E-fasciculatus_F_contig1241.1855.1|Name=mRNA_E-fasciculatus_F_contig1241.1855.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=1701bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1241:12..1712+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
GTTTTTTCTCCTTCGATTGCAGGTCCCATCCCTGTGGAGCTTGGACGGCT
CGCCGTACTGGCGTACCTCGACCTTGGGGCGAACGAGCTAACTGGTAAGT
TTAGCTCAAATTTCCAAGATGAATCCCGCCGATGCGTGGGTGGGACACGA
TCTACGGAGATCGATACACTTTACATGTTCTAGAAGCCGCGGGACACACG
TACTGAACTCGCTAAAATTGGACTTTCGATTGCGCTGCAGGTCCCATTCC
CTCTGAGCTGGGGAACCTTGGTGCCCTGACAACGCTTCTCCTGGCGTTCA
ACCAGCTGACAGGTGAGAAAAAATTGAACGTTATTTTTTTTTTGTATTTC
CGTAGATGCTGTCCCGCCAACGCGTGGGCGGGACCGATGTTCTAGAACGT
GGGGAATATTTTTTGCTTTTCCCCGCTACTTTACCCTGCATTGACTCATT
TATCTACAGGCCACATCCCGCCGCAGCTAGGAGATCTTGGCGCCCTCGAG
GAGCTCTACCTCTTCAACAACAAATTAGATGGTGAGTTGAACAGATCGAA
AAGTTTTTTTAATATCGCGTTCTTGGACATGAACGAATCCCGCCCACGCG
TAGGCGGGAACATGTTCTAGAAGGTAGTCATTCTTGGTATGTTGGAGGCA
GTGTCAAATGTTGCAGTTGACTCTTACCTGAAAGCTCGTTGCGGTCCAAG
GAAAGCAGCGTCAGCTCGGTGAGGTCTCCCAGCTCTTTGGGTATGGCTCC
TGCCCAAAACAGCACAAAAGTAAACCAAAAGTGAGAAAAATAAGTGAAAT
ATGATTCGAGAACGTCGGTCCCACCCACGCGTACGCGGGATTCATGCATC
TGTTCGGGAAACTTTGATCAATCTGTCTCTCACCGCGGAGCTGGTTGTTG
GACACGCTGAGCCACGTGAGCTTAGTGAGAGCGCCGAGCTGCGCCGGGAT
CACACCTGCAGAAGAGTTTTGCATATTTGCGGGGGCAATAAATATATTCA
CCCGCTACTGTAATTTCAAGACAACTGATCTCCGTAGATCCTGTCCCGCC
TACGCGTGGGCGGGACAAGATCTACGGAGATCGATGCTCTGGAAAAAAAT
AAATATTTGTTCAACGATACCACCTAATACGAACCAAACGACCTGTCCTT
CCCCCCAACTAACATGCAGGCGAAATCCCGGCGTCGCTAGGACAGCTCGT
CAAGCTGGAAACGCTCGTCCTCGCCGGAAACAAACTCAGCGGTGAGTGTC
TCTGACATATTCGACTTGGACACGTCACACCAGATTTTGCTTGAATCCCG
CCTATGCGTCGGCGGGATTCAAGTTCAATGCATTCTGCATAAATCGGACG
GAGAATAAACGGTCATTGGTCCCTCCGACTCACCAGATAGTCCGCCACCA
CCACCAACGGGGCCACTGAGGTCAAGCTTCTGCAAGGCGCTCAGATTTCC
CAGCTCAGGCGGGATGGGTCCTGCAGTCGTTCGTTTTACGCGGGGGGGTT
CCGGGTTCCACGGATTCAGAATTCCACAGAACATATTTCGGTTGTGTCCC
ACCCACGCGTGGGTGAGTAAGTGTGTTCTAGAAGCCGGGATGCAATTATT
TGTTTTGTTATCTGCTTGTAGACTCAATTCCCCCAGAGCTGGGAAACCTC
GCAGCACTAGAGGGGCTCTACCTGCAAGGAAACCAGCTCAACGGCCCGTT
C back to topCoding sequence (CDS) from alignment at E-fasciculatus_F_contig1241:12..1712+ >mRNA_E-fasciculatus_F_contig1241.1855.1 ID=mRNA_E-fasciculatus_F_contig1241.1855.1|Name=mRNA_E-fasciculatus_F_contig1241.1855.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=792bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1241:12..1712+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
GTTTTTTCTCCTTCGATTGCAGGTCCCATCCCTGTGGAGCTTGGACGGCT
CGCCGTACTGGCGTACCTCGACCTTGGGGCGAACGAGCTAACTGGTTTTT
TCTCCTTCGATTGCAGGTCCCATCCCTGTGGAGCTTGGACGGCTCGCCGT
ACTGGCGTACCTCGACCTTGGGGCGAACGAGCTAACTGGTCCCATTCCCT
CTGAGCTGGGGAACCTTGGTGCCCTGACAACGCTTCTCCTGGCGTTCAAC
CAGCTGACAGGTCCCATTCCCTCTGAGCTGGGGAACCTTGGTGCCCTGAC
AACGCTTCTCCTGGCGTTCAACCAGCTGACAGGCCACATCCCGCCGCAGC
TAGGAGATCTTGGCGCCCTCGAGGAGCTCTACCTCTTCAACAACAAATTA
GATGGCCACATCCCGCCGCAGCTAGGAGATCTTGGCGCCCTCGAGGAGCT
CTACCTCTTCAACAACAAATTAGATGGCGAAATCCCGGCGTCGCTAGGAC
AGCTCGTCAAGCTGGAAACGCTCGTCCTCGCCGGAAACAAACTCAGCGGT
GAGTGCGAAATCCCGGCGTCGCTAGGACAGCTCGTCAAGCTGGAAACGCT
CGTCCTCGCCGGAAACAAACTCAGCGGTGAGTACTCAATTCCCCCAGAGC
TGGGAAACCTCGCAGCACTAGAGGGGCTCTACCTGCAAGGAAACCAGCTC
AACGGCCCGTTCACTCAATTCCCCCAGAGCTGGGAAACCTCGCAGCACTA
GAGGGGCTCTACCTGCAAGGAAACCAGCTCAACGGCCCGTTC back to top
|