prot_E-fasciculatus_F_contig12398.1842.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig12398.1842.1
Unique Nameprot_E-fasciculatus_F_contig12398.1842.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length98
Homology
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BLAST of mRNA_E-fasciculatus_F_contig12398.1842.1 vs. uniprot
Match: A0A6H5JW72_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JW72_9PHAE)

HSP 1 Score: 139 bits (350), Expect = 1.130e-38
Identity = 66/72 (91.67%), Postives = 68/72 (94.44%), Query Frame = 0 
Query:   16 GDAVCQGMEQFDTERKFAWDHARTMRMGITGAFFVTPASFAWNMYAERLAPGRSLRAVVTKLGVSVAVLPPM 87
            GDA+CQ ME F TERKFAWDH RTMRMGITGAFFVTPASFAWNMYAERLAPGRSLRAV+TKLGVSVAVLPPM
Sbjct:   38 GDALCQAMETFGTERKFAWDHTRTMRMGITGAFFVTPASFAWNMYAERLAPGRSLRAVMTKLGVSVAVLPPM 109
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BLAST of mRNA_E-fasciculatus_F_contig12398.1842.1 vs. uniprot
Match: D7G038_ECTSI (Integral membrane protein-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G038_ECTSI)

HSP 1 Score: 130 bits (326), Expect = 1.960e-35
Identity = 63/65 (96.92%), Postives = 63/65 (96.92%), Query Frame = 0 
Query:   23 MEQFDTERKFAWDHARTMRMGITGAFFVTPASFAWNMYAERLAPGRSLRAVVTKLGVSVAVLPPM 87
            ME F TERKFAWDHARTMRMGITGAFFVTPASFAWNMYAERLAPGRSLRAVVTKLGVSVAVLPPM
Sbjct:    1 METFGTERKFAWDHARTMRMGITGAFFVTPASFAWNMYAERLAPGRSLRAVVTKLGVSVAVLPPM 65
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BLAST of mRNA_E-fasciculatus_F_contig12398.1842.1 vs. uniprot
Match: A0A835ZBN1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBN1_9STRA)

HSP 1 Score: 68.9 bits (167), Expect = 1.100e-11
Identity = 34/73 (46.58%), Postives = 46/73 (63.01%), Query Frame = 0 
Query:   16 GDAVCQGMEQFDTERKFAWDHARTMRMGITGAFFVTPASFAWNMYAERLAPGRSLRAVVTKLGVSVAVLPPMV 88
            GD  CQ ME  D +  + W+ ART R+  TG F +TP S  WN  AERL PGR ++A++ KL V +  +PPM+
Sbjct:   35 GDVACQVMEA-DDKLHWKWNMARTARIAGTGIFVLTPLSIGWNHAAERLFPGRHVKAMLGKLAVQLLCMPPMI 106
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig12398.1842.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5JW72_9PHAE1.130e-3891.67Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G038_ECTSI1.960e-3596.92Integral membrane protein-like protein n=1 Tax=Ect... [more]
A0A835ZBN1_9STRA1.100e-1146.58Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig12398contigE-fasciculatus_F_contig12398:74..367 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig12398.1842.1mRNA_E-fasciculatus_F_contig12398.1842.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig12398 74..367 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig12398.1842.1 ID=prot_E-fasciculatus_F_contig12398.1842.1|Name=mRNA_E-fasciculatus_F_contig12398.1842.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=98bp
LSFLRTTRAAGVWLTGDAVCQGMEQFDTERKFAWDHARTMRMGITGAFFV
TPASFAWNMYAERLAPGRSLRAVVTKLGVSVAVLPPMVRQTAAYSEML
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