mRNA_E-fasciculatus_F_contig12381.1835.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig12381.1835.1 vs. uniprot
Match: A0A6H5KYH2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYH2_9PHAE) HSP 1 Score: 254 bits (648), Expect = 7.780e-81 Identity = 123/125 (98.40%), Postives = 124/125 (99.20%), Query Frame = 1
Query: 19 KSLEALKRCDNDPNVITAVARRFWADRKYAKARKWFNRAITLDPNMGDAWAAYYAFELQQGTEVEQKDVLDRCVAAEPAHGELWTSVSKTTENRRLDKASILKKVVAAYFSDGAVVVIPGGPTST 393
KSLEALKRCDNDP+VITAVARRFWADRKYAKARKWFNRAITLDPNMGDAWAAYYAFELQQGTEVEQKDVLDRCVAAEPAHGELWTSVSKTTENRRLDKASILKKVVAAYFSDGAVVVIPGGPT T
Sbjct: 341 KSLEALKRCDNDPHVITAVARRFWADRKYAKARKWFNRAITLDPNMGDAWAAYYAFELQQGTEVEQKDVLDRCVAAEPAHGELWTSVSKTTENRRLDKASILKKVVAAYFSDGAVVVIPGGPTGT 465
BLAST of mRNA_E-fasciculatus_F_contig12381.1835.1 vs. uniprot
Match: D7FHD2_ECTSI (PRP1_N domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHD2_ECTSI) HSP 1 Score: 255 bits (652), Expect = 3.950e-78 Identity = 124/125 (99.20%), Postives = 125/125 (100.00%), Query Frame = 1
Query: 19 KSLEALKRCDNDPNVITAVARRFWADRKYAKARKWFNRAITLDPNMGDAWAAYYAFELQQGTEVEQKDVLDRCVAAEPAHGELWTSVSKTTENRRLDKASILKKVVAAYFSDGAVVVIPGGPTST 393
KSLEALKRCDNDP+VITAVARRFWADRKYAKARKWFNRAITLDPNMGDAWAAYYAFELQQGTEVEQKDVLDRCVAAEPAHGELWTSVSKTTENRRLDKASILKKVVAAYFSDGAVVVIPGGPTST
Sbjct: 702 KSLEALKRCDNDPHVITAVARRFWADRKYAKARKWFNRAITLDPNMGDAWAAYYAFELQQGTEVEQKDVLDRCVAAEPAHGELWTSVSKTTENRRLDKASILKKVVAAYFSDGAVVVIPGGPTST 826
BLAST of mRNA_E-fasciculatus_F_contig12381.1835.1 vs. uniprot
Match: A0A835YM25_9STRA (PRP1_N domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YM25_9STRA) HSP 1 Score: 172 bits (435), Expect = 3.190e-47 Identity = 81/115 (70.43%), Postives = 96/115 (83.48%), Query Frame = 1
Query: 16 GKSLEALKRCDNDPNVITAVARRFWADRKYAKARKWFNRAITLDPNMGDAWAAYYAFELQQGTEVEQKDVLDRCVAAEPAHGELWTSVSKTTENRRLDKASILKKVVAAYFSDGA 360
GKS+EALKRCDNDP+VITAVAR F DRKY KARKWFNRA+ LD + GDAWAA++AFELQQGT +Q DV+ RCV AEP+HGELW SVSK T N+RLD+ ++L+KVVA YF+ A
Sbjct: 701 GKSVEALKRCDNDPHVITAVARLFEKDRKYPKARKWFNRAVALDADNGDAWAAFFAFELQQGTAEQQADVIARCVKAEPSHGELWCSVSKKTGNQRLDRETVLRKVVAQYFAPDA 815
BLAST of mRNA_E-fasciculatus_F_contig12381.1835.1 vs. uniprot
Match: A0A7S2USD3_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2USD3_9STRA) HSP 1 Score: 156 bits (394), Expect = 2.890e-44 Identity = 74/113 (65.49%), Postives = 89/113 (78.76%), Query Frame = 1
Query: 19 KSLEALKRCDNDPNVITAVARRFWADRKYAKARKWFNRAITLDPNMGDAWAAYYAFELQQGTEVEQKDVLDRCVAAEPAHGELWTSVSKTTENRRLDKASILKKVVAAYFSDG 357
+S+EALKRCDNDPNVI AVA F +RK AK+RKWFNRA+ LDP++GDAWA +YAFELQ G + +Q+++L RCVAAEP HGELW SK TENRR + +ILKKVVAA G
Sbjct: 213 RSVEALKRCDNDPNVILAVAVLFQNERKVAKSRKWFNRAVALDPDLGDAWALFYAFELQHGKKEDQEELLKRCVAAEPTHGELWCGTSKKTENRRCNTETILKKVVAALAGIG 325
BLAST of mRNA_E-fasciculatus_F_contig12381.1835.1 vs. uniprot
Match: A0A7S3XY73_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XY73_HETAK) HSP 1 Score: 161 bits (408), Expect = 9.510e-44 Identity = 76/118 (64.41%), Postives = 93/118 (78.81%), Query Frame = 1
Query: 19 KSLEALKRCDNDPNVITAVARRFWADRKYAKARKWFNRAITLDPNMGDAWAAYYAFELQQGTEVEQKDVLDRCVAAEPAHGELWTSVSKTTENRRLDKASILKKVVAAYFSDGAVVVI 372
+S+EALKRCDNDP+V+ AVAR F +DRK+AKARKWF RA+ L P +GDAWA +YAFEL+QGT EQ+ VLDRCVAAEPAHGELW +V+K T NRRL A +L+KVVA + A +
Sbjct: 606 RSVEALKRCDNDPHVVLAVARLFASDRKHAKARKWFERAVALRPGLGDAWARFYAFELRQGTPEEQRAVLDRCVAAEPAHGELWQAVAKRTANRRLGPAEVLRKVVAELAAGAAAPAV 723
BLAST of mRNA_E-fasciculatus_F_contig12381.1835.1 vs. uniprot
Match: A0A438KFT4_VITVI (Protein STABILIZED 1 n=1 Tax=Vitis vinifera TaxID=29760 RepID=A0A438KFT4_VITVI) HSP 1 Score: 145 bits (367), Expect = 3.390e-42 Identity = 69/115 (60.00%), Postives = 83/115 (72.17%), Query Frame = 1
Query: 19 KSLEALKRCDNDPNVITAVARRFWADRKYAKARKWFNRAITLDPNMGDAWAAYYAFELQQGTEVEQKDVLDRCVAAEPAHGELWTSVSKTTENRRLDKASILKKVVAAYFSDGAV 363
KSL+ALK+CD+DP+VI AVA+ FW DRK KAR W NRA+TL P++GD WA YY FE+Q G+E QKDVL RCVAAEP HGE W +SK EN L +ILKK V A + +V
Sbjct: 39 KSLDALKKCDHDPHVIAAVAKLFWHDRKVDKARTWLNRAVTLAPDIGDFWALYYKFEVQHGSEENQKDVLRRCVAAEPKHGEKWKVISKAVENSHLPTEAILKKAVVALGKEESV 153
BLAST of mRNA_E-fasciculatus_F_contig12381.1835.1 vs. uniprot
Match: A0A2R6QX31_ACTCC (Uncharacterized protein n=1 Tax=Actinidia chinensis var. chinensis TaxID=1590841 RepID=A0A2R6QX31_ACTCC) HSP 1 Score: 147 bits (370), Expect = 1.400e-40 Identity = 68/108 (62.96%), Postives = 81/108 (75.00%), Query Frame = 1
Query: 19 KSLEALKRCDNDPNVITAVARRFWADRKYAKARKWFNRAITLDPNMGDAWAAYYAFELQQGTEVEQKDVLDRCVAAEPAHGELWTSVSKTTENRRLDKASILKKVVAA 342
KS++ALK+CD+DP+VI AVA+ FW DRK KAR W NRA+TL P++GD WA YY FELQ GTE QKDVL RC+AAEP HGE W ++SK EN +ILKKVV A
Sbjct: 217 KSMDALKKCDHDPHVIAAVAKLFWHDRKVDKARNWLNRAVTLAPDIGDFWALYYKFELQHGTEDNQKDVLKRCIAAEPKHGEKWQAISKAVENSHQPTEAILKKVVVA 324
BLAST of mRNA_E-fasciculatus_F_contig12381.1835.1 vs. uniprot
Match: UPI00098E1367 (protein STABILIZED1 n=1 Tax=Asparagus officinalis TaxID=4686 RepID=UPI00098E1367) HSP 1 Score: 151 bits (381), Expect = 8.210e-40 Identity = 73/120 (60.83%), Postives = 84/120 (70.00%), Query Frame = 1
Query: 19 KSLEALKRCDNDPNVITAVARRFWADRKYAKARKWFNRAITLDPNMGDAWAAYYAFELQQGTEVEQKDVLDRCVAAEPAHGELWTSVSKTTENRRLDKASILKKVVAAYFSDGAVVVIPG 378
KS +ALKRCD+DP+VI VA+ FW DRK KAR WFNRA+TL P++GD WA YY FELQ G E QKDVL RCVAAEP HGE WTS+SK EN L +ILKKVV A + + G
Sbjct: 821 KSADALKRCDHDPHVIATVAKLFWHDRKVDKARSWFNRAVTLSPDVGDFWALYYKFELQHGNEDTQKDVLKRCVAAEPKHGERWTSISKAVENSHLLVEAILKKVVVALGKEENPAIADG 940
BLAST of mRNA_E-fasciculatus_F_contig12381.1835.1 vs. uniprot
Match: A0A5P1FRW4_ASPOF (Uncharacterized protein n=1 Tax=Asparagus officinalis TaxID=4686 RepID=A0A5P1FRW4_ASPOF) HSP 1 Score: 151 bits (381), Expect = 8.350e-40 Identity = 73/120 (60.83%), Postives = 84/120 (70.00%), Query Frame = 1
Query: 19 KSLEALKRCDNDPNVITAVARRFWADRKYAKARKWFNRAITLDPNMGDAWAAYYAFELQQGTEVEQKDVLDRCVAAEPAHGELWTSVSKTTENRRLDKASILKKVVAAYFSDGAVVVIPG 378
KS +ALKRCD+DP+VI VA+ FW DRK KAR WFNRA+TL P++GD WA YY FELQ G E QKDVL RCVAAEP HGE WTS+SK EN L +ILKKVV A + + G
Sbjct: 893 KSADALKRCDHDPHVIATVAKLFWHDRKVDKARSWFNRAVTLSPDVGDFWALYYKFELQHGNEDTQKDVLKRCVAAEPKHGERWTSISKAVENSHLLVEAILKKVVVALGKEENPAIADG 1012
BLAST of mRNA_E-fasciculatus_F_contig12381.1835.1 vs. uniprot
Match: A0A0C9S9J4_9SPER (TSA: Wollemia nobilis Ref_Wollemi_Transcript_239_3443 transcribed RNA sequence n=1 Tax=Wollemia nobilis TaxID=56998 RepID=A0A0C9S9J4_9SPER) HSP 1 Score: 150 bits (380), Expect = 1.140e-39 Identity = 73/116 (62.93%), Postives = 84/116 (72.41%), Query Frame = 1
Query: 19 KSLEALKRCDNDPNVITAVARRFWADRKYAKARKWFNRAITLDPNMGDAWAAYYAFELQQGTEVEQKDVLDRCVAAEPAHGELWTSVSKTTENRRLDKASILKKVVAAYFSDGAVV 366
KS++ALKRCD+DP VI AVA+ FW DRK KAR WFNRA+TL P+ GD WA YY FELQ GTE Q+DVL RC+AAEP HGE WTS+SK EN +ILKKVV A + VV
Sbjct: 903 KSMDALKRCDHDPYVIAAVAKLFWHDRKVDKARNWFNRAVTLAPDNGDFWAQYYKFELQHGTEEIQQDVLKRCIAAEPRHGERWTSISKAVENSHQPIEAILKKVVVAIGKEEGVV 1018 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig12381.1835.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig12381.1835.1 >prot_E-fasciculatus_F_contig12381.1835.1 ID=prot_E-fasciculatus_F_contig12381.1835.1|Name=mRNA_E-fasciculatus_F_contig12381.1835.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=133bp PTPPTGKSLEALKRCDNDPNVITAVARRFWADRKYAKARKWFNRAITLDPback to top mRNA from alignment at E-fasciculatus_F_contig12381:2942..3646+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig12381.1835.1 ID=mRNA_E-fasciculatus_F_contig12381.1835.1|Name=mRNA_E-fasciculatus_F_contig12381.1835.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=705bp|location=Sequence derived from alignment at E-fasciculatus_F_contig12381:2942..3646+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig12381:2942..3646+ >mRNA_E-fasciculatus_F_contig12381.1835.1 ID=mRNA_E-fasciculatus_F_contig12381.1835.1|Name=mRNA_E-fasciculatus_F_contig12381.1835.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=798bp|location=Sequence derived from alignment at E-fasciculatus_F_contig12381:2942..3646+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |