mRNA_E-fasciculatus_F_contig12354.1814.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-fasciculatus_F_contig12354.1814.1
Unique NamemRNA_E-fasciculatus_F_contig12354.1814.1
TypemRNA
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Homology
BLAST of mRNA_E-fasciculatus_F_contig12354.1814.1 vs. uniprot
Match: D8LG87_ECTSI (Amine oxidase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LG87_ECTSI)

HSP 1 Score: 369 bits (948), Expect = 1.690e-124
Identity = 181/186 (97.31%), Postives = 182/186 (97.85%), Query Frame = 1
Query:    1 GALGMLYFFILAHQADFDVKWCRGTTGEMIFKPWVQRIEENGAKVLVEKRVSDVEVCPDTGSVVSVSCGDESFPCDAVVSAVGINGVKGIVRAAPELSKLPFFSKMMNLRSVDALAVRLYLDRRVRIPYQSNACFGFDKTTGWTFFDLTAMHDSLDKSEGTVLEADFYHADQLLPRSDQDLVNKVR 558
            GALGMLYFFILAHQADFDVKWCRGTTGEMIFKPWVQRIEENGAKVLVEKRVSDVEVCPDTG VVSVSCG ESFPCDAVVSAVGINGVKGIVRAAP LSKLPFFSKMMNLRSVDALAVRLYLDRRVRIPYQSNACFGFDKTTGWTFFDLTAMHDSLDKSEGTVLEADFYHADQLLPRSDQDLV KV+
Sbjct:  212 GALGMLYFFILAHQADFDVKWCRGTTGEMIFKPWVQRIEENGAKVLVEKRVSDVEVCPDTGRVVSVSCGGESFPCDAVVSAVGINGVKGIVRAAPGLSKLPFFSKMMNLRSVDALAVRLYLDRRVRIPYQSNACFGFDKTTGWTFFDLTAMHDSLDKSEGTVLEADFYHADQLLPRSDQDLVAKVQ 397          
BLAST of mRNA_E-fasciculatus_F_contig12354.1814.1 vs. uniprot
Match: A0A6H5KSI6_9PHAE (Amino_oxidase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSI6_9PHAE)

HSP 1 Score: 363 bits (933), Expect = 2.940e-121
Identity = 178/186 (95.70%), Postives = 181/186 (97.31%), Query Frame = 1
Query:    1 GALGMLYFFILAHQADFDVKWCRGTTGEMIFKPWVQRIEENGAKVLVEKRVSDVEVCPDTGSVVSVSCGDESFPCDAVVSAVGINGVKGIVRAAPELSKLPFFSKMMNLRSVDALAVRLYLDRRVRIPYQSNACFGFDKTTGWTFFDLTAMHDSLDKSEGTVLEADFYHADQLLPRSDQDLVNKVR 558
            GALGMLYFFILAHQADFDVKWCRGTTGEMIFKPWVQRIEENGAKVLVEKRVSDVEVCPDTG VVSV+CG ESFPCDAVVSAVGINGVKGIVRAA  LS+LPFFSKMMNLRSVDALAVRLYLDRRVRIPYQSNACFGFDKTTGWTFFDLTAMHDSLDKSEGTVLEADFYHADQLLPRSDQDLV KV+
Sbjct:  276 GALGMLYFFILAHQADFDVKWCRGTTGEMIFKPWVQRIEENGAKVLVEKRVSDVEVCPDTGRVVSVTCGGESFPCDAVVSAVGINGVKGIVRAARGLSRLPFFSKMMNLRSVDALAVRLYLDRRVRIPYQSNACFGFDKTTGWTFFDLTAMHDSLDKSEGTVLEADFYHADQLLPRSDQDLVAKVQ 461          
BLAST of mRNA_E-fasciculatus_F_contig12354.1814.1 vs. uniprot
Match: I2CPM9_NANGC (Amine oxidase (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CPM9_NANGC)

HSP 1 Score: 267 bits (683), Expect = 1.700e-87
Identity = 128/184 (69.57%), Postives = 148/184 (80.43%), Query Frame = 1
Query:    7 LGMLYFFILAHQADFDVKWCRGTTGEMIFKPWVQRIEENGAKVLVEKRVSDVEVCPDTGSVVSVSCGDESFPCDAVVSAVGINGVKGIVRAAPELSKLPFFSKMMNLRSVDALAVRLYLDRRVRIPYQSNACFGFDKTTGWTFFDLTAMHDSLDKSEGTVLEADFYHADQLLPRSDQDLVNKVR 558
            LGMLY+FILAHQADFDV+W RGT GE+IF+PWV++I E G  +   KRVSD+   P+TG +  V CGDE F  DAVVSAVGING+K IVR +P LS+   FS MMNLRS+D LAVRLYLDR+V IPY+SNACFGFDKTTGWTFFDLT +HD L  S  TVLEADFYHADQLLP+SD+ LV KV+
Sbjct:   37 LGMLYYFILAHQADFDVQWVRGTVGELIFRPWVEKIRELGTNIQTSKRVSDLVQDPETGRITGVRCGDEVFEADAVVSAVGINGLKAIVRNSPVLSRRKMFSDMMNLRSIDVLAVRLYLDRKVSIPYKSNACFGFDKTTGWTFFDLTQLHDELADSPVTVLEADFYHADQLLPQSDEALVAKVK 220          
BLAST of mRNA_E-fasciculatus_F_contig12354.1814.1 vs. uniprot
Match: UPI0019FF2D9A (FAD-dependent oxidoreductase n=1 Tax=Synechococcales cyanobacterium M55_K2018_004 TaxID=2774347 RepID=UPI0019FF2D9A)

HSP 1 Score: 237 bits (604), Expect = 8.270e-73
Identity = 115/192 (59.90%), Postives = 142/192 (73.96%), Query Frame = 1
Query:    4 ALGMLYFFILAHQADFDVKWCRGTTGEMIFKPWVQRIEENGAKVLVEKRVSDVEVCPDTGSVVS--VSCGDESFPCDAVVSAVGINGVKGIVRAAPELSKLPFFSKMMNLRSVDALAVRLYLDRRVRIPYQSNACFGFDKTTGWTFFDLTAMHDSLDKSEGTVLEADFYHADQLLPRSDQDLVNKV-RTLST 570
            ALGMLY+FILAHQ DFDV WCRGT GEMIF+PWV+RIE+ G KVL ++RV+DV +   T   V+  V CGD+ F  DAV+ AVG+ G++ IV  +  L + P F  +MNL +VD LA RL+ DR+V IPY SNACFGFD TTGWTFF+L A+HD      GTVLEADFYHA+QLLPR+D  +V K+ R L+T
Sbjct:  193 ALGMLYYFILAHQPDFDVVWCRGTVGEMIFRPWVERIEQAGGKVLTQRRVTDVVLESSTSGPVAKAVVCGDDVFAADAVIFAVGVTGIQKIVGGSESLRQFPEFCSLMNLGAVDVLATRLWFDRKVTIPYASNACFGFDNTTGWTFFNLNALHDEFHDEPGTVLEADFYHANQLLPRTDAQIVEKLQRDLAT 384          
BLAST of mRNA_E-fasciculatus_F_contig12354.1814.1 vs. uniprot
Match: UPI0016889928 (FAD-dependent oxidoreductase n=1 Tax=Oscillatoria sp. FACHB-1407 TaxID=2692847 RepID=UPI0016889928)

HSP 1 Score: 235 bits (599), Expect = 4.730e-72
Identity = 112/192 (58.33%), Postives = 144/192 (75.00%), Query Frame = 1
Query:    4 ALGMLYFFILAHQADFDVKWCRGTTGEMIFKPWVQRIEENGAKVLVEKRVSDV--EVCPDTGSVVSVSCGDESFPCDAVVSAVGINGVKGIVRAAPELSKLPFFSKMMNLRSVDALAVRLYLDRRVRIPYQSNACFGFDKTTGWTFFDLTAMHDSLDKSEGTVLEADFYHADQLLPRSDQDLVNKV-RTLST 570
            ALGMLY+FILAHQ +FDV WCRGT GEMIF+PWV+RIE+ G +VL ++RV+DV  E   +T     V CG+E F  DAV+ AVG+ G++ IV  +P L +LP F K+MNL ++D LA RL+ DR+V +P  SNACFGFD TTGWTFFDL  +HD   ++EG+V+EADFYHA+QLLP  D+ +V KV R L+T
Sbjct:  195 ALGMLYYFILAHQPNFDVVWCRGTVGEMIFRPWVERIEQAGGRVLTQRRVTDVRLETVGETLKATGVVCGNEVFEADAVIFAVGVTGMQKIVSNSPNLRRLPEFCKLMNLGAIDVLATRLWFDRKVSVPRPSNACFGFDTTTGWTFFDLNTLHDEWQEAEGSVIEADFYHANQLLPLEDEQIVAKVHRDLAT 386          
BLAST of mRNA_E-fasciculatus_F_contig12354.1814.1 vs. uniprot
Match: UPI00034B8036 (FAD-dependent oxidoreductase n=1 Tax=Synechococcus sp. PCC 7336 TaxID=195250 RepID=UPI00034B8036)

HSP 1 Score: 234 bits (598), Expect = 6.350e-72
Identity = 113/190 (59.47%), Postives = 137/190 (72.11%), Query Frame = 1
Query:    4 ALGMLYFFILAHQADFDVKWCRGTTGEMIFKPWVQRIEENGAKVLVEKRVSDVEVCPDTGSVVSVSCGDESFPCDAVVSAVGINGVKGIVRAAPELSKLPFFSKMMNLRSVDALAVRLYLDRRVRIPYQSNACFGFDKTTGWTFFDLTAMHDSLDKSEGTVLEADFYHADQLLPRSDQDLVNKVRTLSTT 573
            ALGMLY+FILAHQ DFDV WCRGT G+ IF+PWV RIE  G KVL E+RVSD+ V    G   +V CGDE F  DAV+ AVGI+G++ IVR +  L   P F  +MNLRS+D +A RL+ DR+V +P  SNACFGFD  TGWTFFDL  +HD    + GTV+EADFYHAD+LLP SD+ +V KV+   TT
Sbjct:  194 ALGMLYYFILAHQPDFDVVWCRGTIGKWIFQPWVDRIETAGGKVLTERRVSDL-VLDKRGRAKAVVCGDERFDADAVIFAVGISGMQAIVRGSESLRSRPEFLDVMNLRSIDVMATRLWFDRKVEVPLPSNACFGFDPATGWTFFDLNTLHDEFRDAPGTVIEADFYHADRLLPMSDEQIVRKVQRDLTT 382          
BLAST of mRNA_E-fasciculatus_F_contig12354.1814.1 vs. uniprot
Match: UPI000349D2CD (FAD-dependent oxidoreductase n=1 Tax=Geminocystis herdmanii TaxID=669359 RepID=UPI000349D2CD)

HSP 1 Score: 234 bits (597), Expect = 8.530e-72
Identity = 111/190 (58.42%), Postives = 137/190 (72.11%), Query Frame = 1
Query:    4 ALGMLYFFILAHQADFDVKWCRGTTGEMIFKPWVQRIEENGAKVLVEKRVSDVEVCPDTGSVVSVSCGDESFPCDAVVSAVGINGVKGIVRAAPELSKLPFFSKMMNLRSVDALAVRLYLDRRVRIPYQSNACFGFDKTTGWTFFDLTAMHDSLDKSEGTVLEADFYHADQLLPRSDQDLVNKVRTLSTT 573
            ALGMLY+FILAHQ +FDV WCRGT GEMIF+PW+++IEE G KVL  KRV+D+ V    G   +V CG+E F  +AV+S V I+G+K IV  +P LSK   F  + NLRS+D LAVRL+ DRR+ IP  SNACFGFD TTGWTFFDL  +HD     EG+V+E DFYHA+QLL  SD+ ++ KV    TT
Sbjct:  193 ALGMLYYFILAHQPNFDVMWCRGTVGEMIFQPWIEKIEELGGKVLTNKRVTDI-VIDTEGKATAVVCGEEVFEAEAVISGVSISGIKKIVSNSPNLSKYQEFRNLQNLRSIDVLAVRLWFDRRINIPLSSNACFGFDATTGWTFFDLNTLHDKYKDEEGSVIEVDFYHANQLLSMSDERILQKVHQDLTT 381          
BLAST of mRNA_E-fasciculatus_F_contig12354.1814.1 vs. uniprot
Match: A0A7Y5M9Z3_9CYAN (FAD-dependent oxidoreductase n=1 Tax=Pseudanabaena biceps TaxID=927669 RepID=A0A7Y5M9Z3_9CYAN)

HSP 1 Score: 234 bits (596), Expect = 1.200e-71
Identity = 113/190 (59.47%), Postives = 139/190 (73.16%), Query Frame = 1
Query:    4 ALGMLYFFILAHQADFDVKWCRGTTGEMIFKPWVQRIEENGAKVLVEKRVSDVEVCPDTGSVVSVSCGDESFPCDAVVSAVGINGVKGIVRAAPELSKLPFFSKMMNLRSVDALAVRLYLDRRVRIPYQSNACFGFDKTTGWTFFDLTAMHDSLDKSEGTVLEADFYHADQLLPRSDQDLVNKVRTLSTT 573
            ALGMLY+FILAHQADFDV WCRGT GE IFKPW  RI   G K+L ++RVSDV V   +G V +V CGDESF  DAV+ AVGI+G++ IV  +P L K   F  +MNL +VD LAVRL+ DR++ IP  SNACFGFDKTTGWTFFDL A+HD    + G+V+E DFYHA+Q LP  +Q+++  V+   TT
Sbjct:  193 ALGMLYYFILAHQADFDVVWCRGTVGEKIFKPWCDRITGLGGKILTDRRVSDVSVDV-SGKVNAVICGDESFEADAVIFAVGISGIQKIVTTSPALQKRREFRNLMNLGAVDVLAVRLWCDRKINIPRPSNACFGFDKTTGWTFFDLNALHDEFADASGSVIEVDFYHANQFLPLDNQEIIQIVQEYLTT 381          
BLAST of mRNA_E-fasciculatus_F_contig12354.1814.1 vs. uniprot
Match: A0A563W554_9CYAN (Amino_oxidase domain-containing protein n=2 Tax=Pleurocapsales TaxID=52604 RepID=A0A563W554_9CYAN)

HSP 1 Score: 232 bits (592), Expect = 4.760e-71
Identity = 109/190 (57.37%), Postives = 135/190 (71.05%), Query Frame = 1
Query:    4 ALGMLYFFILAHQADFDVKWCRGTTGEMIFKPWVQRIEENGAKVLVEKRVSDVEVCPDTGSVVSVSCGDESFPCDAVVSAVGINGVKGIVRAAPELSKLPFFSKMMNLRSVDALAVRLYLDRRVRIPYQSNACFGFDKTTGWTFFDLTAMHDSLDKSEGTVLEADFYHADQLLPRSDQDLVNKV-RTLST 570
            ALGMLY+FILAHQ DFDV WCRGT GE IFKPW+ +IE+ G KVL  KRVSD+ V   TG  + V CGDE F  DA++S V I G+K IV ++  L+    F  + NL+ +D LA RL+ DR++ IP  SNACFGFD TTGWTFFDL  +HD       TV+EADFYHA+QLLP +D+ ++NKV R +ST
Sbjct:  196 ALGMLYYFILAHQPDFDVVWCRGTVGEKIFKPWIAKIEKAGGKVLTNKRVSDI-VVDKTGKTIGVKCGDEFFAADAIISGVSITGMKKIVESSSNLNNYAQFRNLANLKGIDVLATRLWFDRKINIPLPSNACFGFDATTGWTFFDLNDLHDEYQNEPNTVIEADFYHANQLLPMTDEQIINKVHRDVST 384          
BLAST of mRNA_E-fasciculatus_F_contig12354.1814.1 vs. uniprot
Match: A0A2W4VRS4_9CYAN (Amine oxidase n=2 Tax=Pseudanabaena TaxID=1152 RepID=A0A2W4VRS4_9CYAN)

HSP 1 Score: 232 bits (591), Expect = 6.710e-71
Identity = 114/190 (60.00%), Postives = 138/190 (72.63%), Query Frame = 1
Query:    4 ALGMLYFFILAHQADFDVKWCRGTTGEMIFKPWVQRIEENGAKVLVEKRVSDVEVCPDTGSVVSVSCGDESFPCDAVVSAVGINGVKGIVRAAPELSKLPFFSKMMNLRSVDALAVRLYLDRRVRIPYQSNACFGFDKTTGWTFFDLTAMHDSLDKSEGTVLEADFYHADQLLPRSDQDLVNKVRTLSTT 573
            ALGMLY+FILAHQADFDV WCRGT GE IFKPW  RI + G K+L  +RVSDV V  +TG V SV CGDESF  DAV+ AVGI+G++ IV  +P L K   F  +MNL ++D LAVRL+ DR+++IP  SNACFGFD TTGWTFFDL A+HD      G+V+E DFYHA+Q LP   Q++V  V+   TT
Sbjct:  193 ALGMLYYFILAHQADFDVVWCRGTVGEKIFKPWCDRITDLGGKILTNRRVSDVCV-DETGKVTSVVCGDESFDADAVIFAVGISGMQKIVANSPTLQKRREFRNLMNLGAIDVLAVRLWFDRKIQIPRPSNACFGFDVTTGWTFFDLNALHDEYADEAGSVIEIDFYHANQFLPLDRQEIVAIVQRYLTT 381          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig12354.1814.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LG87_ECTSI1.690e-12497.31Amine oxidase n=1 Tax=Ectocarpus siliculosus TaxID... [more]
A0A6H5KSI6_9PHAE2.940e-12195.70Amino_oxidase domain-containing protein n=1 Tax=Ec... [more]
I2CPM9_NANGC1.700e-8769.57Amine oxidase (Fragment) n=1 Tax=Nannochloropsis g... [more]
UPI0019FF2D9A8.270e-7359.90FAD-dependent oxidoreductase n=1 Tax=Synechococcal... [more]
UPI00168899284.730e-7258.33FAD-dependent oxidoreductase n=1 Tax=Oscillatoria ... [more]
UPI00034B80366.350e-7259.47FAD-dependent oxidoreductase n=1 Tax=Synechococcus... [more]
UPI000349D2CD8.530e-7258.42FAD-dependent oxidoreductase n=1 Tax=Geminocystis ... [more]
A0A7Y5M9Z3_9CYAN1.200e-7159.47FAD-dependent oxidoreductase n=1 Tax=Pseudanabaena... [more]
A0A563W554_9CYAN4.760e-7157.37Amino_oxidase domain-containing protein n=2 Tax=Pl... [more]
A0A2W4VRS4_9CYAN6.710e-7160.00Amine oxidase n=2 Tax=Pseudanabaena TaxID=1152 Rep... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig12354contigE-fasciculatus_F_contig12354:448..3664 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score360.5
Seed ortholog evalue4.7e-97
Seed eggNOG ortholog2880.D8LG87
EggNOG free text desc.oxidoreductase activity
EggNOG OGsCOG1231@1,KOG0029@2759
COG Functional cat.E
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionAmine oxidase
Ec32 orthologEc-17_004150.1
Exons4
Model size576
Cds size564
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig12354.1814.1prot_E-fasciculatus_F_contig12354.1814.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalepolypeptideE-fasciculatus_F_contig12354 448..3652 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927742.1312745-CDS-E-fasciculatus_F_contig12354:447..6311622927742.1312745-CDS-E-fasciculatus_F_contig12354:447..631Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12354 448..631 -
1695995675.2668567-CDS-E-fasciculatus_F_contig12354:447..6311695995675.2668567-CDS-E-fasciculatus_F_contig12354:447..631Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12354 448..631 -
1622927742.1477225-CDS-E-fasciculatus_F_contig12354:2153..22161622927742.1477225-CDS-E-fasciculatus_F_contig12354:2153..2216Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12354 2154..2216 -
1695995675.2772253-CDS-E-fasciculatus_F_contig12354:2153..22161695995675.2772253-CDS-E-fasciculatus_F_contig12354:2153..2216Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12354 2154..2216 -
1622927742.161826-CDS-E-fasciculatus_F_contig12354:2349..25321622927742.161826-CDS-E-fasciculatus_F_contig12354:2349..2532Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12354 2350..2532 -
1695995675.287101-CDS-E-fasciculatus_F_contig12354:2349..25321695995675.287101-CDS-E-fasciculatus_F_contig12354:2349..2532Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12354 2350..2532 -
1622927742.1769586-CDS-E-fasciculatus_F_contig12354:3518..36521622927742.1769586-CDS-E-fasciculatus_F_contig12354:3518..3652Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12354 3519..3652 -
1695995675.2969186-CDS-E-fasciculatus_F_contig12354:3518..36521695995675.2969186-CDS-E-fasciculatus_F_contig12354:3518..3652Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig12354 3519..3652 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927742.197468-UTR-E-fasciculatus_F_contig12354:3652..36641622927742.197468-UTR-E-fasciculatus_F_contig12354:3652..3664Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig12354 3653..3664 -
1695995675.30661-UTR-E-fasciculatus_F_contig12354:3652..36641695995675.30661-UTR-E-fasciculatus_F_contig12354:3652..3664Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig12354 3653..3664 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-fasciculatus_F_contig12354.1814.1

>prot_E-fasciculatus_F_contig12354.1814.1 ID=prot_E-fasciculatus_F_contig12354.1814.1|Name=mRNA_E-fasciculatus_F_contig12354.1814.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=188bp
MLYFFILAHQADFDVKWCRGTTGEMIFKPWVQRIEENGAKVLVEKRVSDV
EVCPDTGSVVSVSCGDESFPCDAVVSAVGINGVKGIVRAAPELSKLPFFS
KMMNLRSVDALAVRLYLDRRVRIPYQSNACFGFDKTTGWTFFDLTAMHDS
LDKSEGTVLEADFYHADQLLPRSDQDLVNKVRTLSTT*
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mRNA from alignment at E-fasciculatus_F_contig12354:448..3664-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-fasciculatus_F_contig12354.1814.1 ID=mRNA_E-fasciculatus_F_contig12354.1814.1|Name=mRNA_E-fasciculatus_F_contig12354.1814.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=3217bp|location=Sequence derived from alignment at E-fasciculatus_F_contig12354:448..3664- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
GGCGCTCTGGGGATGCTGTACTTCTTCATCCTGGCGCACCAGGCAGACTT CGACGTGAAGTGGTGCAGGGGCACCACGGGAGAGATGATCTTCAAGCCGT GGGTGCAGAGGATAGAGGAGAACGGAGCGAAGGTGCTGGTGGAAAAGTGA GTGATCTCTCTCTCTCTCTCTCTTCCATGGAGACCCTCATTTGTAGCAGG GAATCAAGGGGGGGAGGATCGATACGGAGAATGGTACCGTGGGATGGTGG AGAAGTGAGCGACATGTTTTGCCACGAATTCGCGGCAAGAGGTGGTCGCA GGGTTAGCTGTGAGCAGGTGTTGTGCGTGCATTCAAAGCTCAAAATTCTT CGCTGCCTGCTCGCCCCAGATCGCAGTCCGGAACGCAAGGTTACGACGAG GTGCGGTTCGCGAAGCCATTTGCGGTCGTACGTTTTGCCCAAGGGGTCTG TTCGTTCTCACCCCGCCCGACCTGCGTTGTCACCCTAGACTACTCCCACT CCCTCCACCCGCATGCGTGCATCTCACCGTACCGAAAAATACGGGCAAAA TGACTATGAATACAGTGATTGTACTGTACTTCTCCGTCACCAAGAGGACA TCCCACCTAACCCTAACCCTAACCCCGAAACAATGGTGTATTATAGTGTA TTATACGATCGAGAATTTCGCTAAACTGCTACTTCTCCGCTACCACGAGT TTGGTGGGTGCTATACAATAGTAGTCGAAACACGACCGACACGAACGAAG AACGTTCTTCGAACAAAGAACGTTCTTCGCGTCTACGAGATCGTTTTCCA AAAAACATAATTTTGGGCATTCGCAGCCTCTTAGGTTGTGCAACAGCAGT TGAGTCGAGCTTTGTTTTAAGAACCGACCGCACACCCGTGCGGCTCGCGA TGGCTCTAATCGCACTGGCGATCCATTCATGCGGGTCGCCCTGCCTCTTG AGGTATTCGTGATCCACTGTGCGCCTGACGCTCAAGGCACCGGCCATCTC CCAACCCCCCACACTAAGCACCGTACGCCGTCGTCCCCTCGCTTATTTCC CTCAAGAAGGGAGCTACAGCTACAGCTAGAGTAAGTTTTGTTTTGTTGTC GCTCGTTGCTTGGGCCCGCCCGCGAAAGGAAGGCGCGTTAGCGACGTCGA GGTCTGCCCAGACACCGGGAGCGTGGTGTCCGTGTCGTGCGGGGACGAGT CGTTCCCGTGCGACGCGGTCGTGTCTGCGGTGGGCATCAACGGGGTCAAG GGCATCGTGAGGGCGGCGCCGGAGCTGTCTAAGCTGCCGTTCTTCTCCAA GATGATGAATCTCAGGTCAGCGCAGGTAGTCCACGGTTGGGTTCGGACGG GCGATGAGTATGAAGTACGAGCACCATGACCAGTTATCAACATACACACA CATGATAAAAGTCAAATGGGTGCATCTGTTTGGTGTTTGTTCGGTCAGGT CTGTGGACGCGCTTGCGGTTCGGCTGTACCTGGACAGGAGGGTGAGGATA CCCTACCAGAGGTGAGATCTTGAGATAATCACTGCAGTTCTGCTGTTACA GCACACACGAAACGGTTTGCTTCAATCACGTAACGATTAACCCTTTGTAG AGGACACCCCATTCGAAGGAATGTCTTCAAGTATTTTTGCGGTTGTGATG TGTTGAGAAATCTTCTAGAGACCGGGTGGTTTGTTGCTCCGGTGGCGTTG ATTGTGCGCACGTCTCCGGGGAAGTTGAAAAATCGTATGAGCATCCTCCG GCCAATGCCAAACTGCGTGCTTGTGTTGTGCTTGAGTTTTCCGTATGTGC GTGCTGTTATCGCGGGCTGCCGTGGCATACACCCTTCGCGGCGAACCCCT TCCAAGTACTGGAAACCATCAAGTACAGCAGTCGTCCCTTGGTCAAGAAG ACGCATGGGCTGTCGTTTAAACTGGTGTTCTTGAGCCGGAGAAGCTTCCC TAAGGTTGATACCCCTCCTTATGTTGTACATTCTGCGAGGCACCATGCCT GTACAATAAAGCTGTCCTTAACCGAGGGATGACGGTAGCCCTTGGGCAGA TCTGCTCTTGGCATCGCCCGTGTGGAGGCCGTACGTTCACCGTGACGGTG TCGATCGCAACCATGAATGGGACAGTGGAGCGCGTGACACACACACGAAC GAATGCTGCCTTCCGCAAAGCGACTTAAAAAAGGAAAAGTGTCTTCGTTT GTCGAGCAGATACAAGAACGTCAGGGTTAGTCGAATCGTAGCCTTCTCCT TCTTGTCTGCCGGTAACCAGGGCCAGGGGTCATGAGTGAGAGGAGTGAGA GGAGTGAGAGGAGTGAGAGGAGTGATAGCCCTCGTTGTCATTCCGTCGAC GAGGAGAGGACACTCGGCTGTAGAAACTTGAGTGAGACAGAGACTGTTGC CTTTTTTTTTTTTTTCTTTCCTTGGTGGAATTGTTTGTTGGGTTGGGTGT TGTTGTCGGGTGGGGACACACACGCAAGAGGGTCTGTGTAGCGACACGGA TGTCAGATTGACCCGAGGGTGGCTAAAAAGTGTTGCCGCAAAGAGAAACG CCGATACGTCGAAGCCGCTTTCACCGGACATAAAAATAGTTGCAGATTGC AGGGTCATGAGTGATAGGAGTGATAGCCCTCGTTGTCATTCCGTCGACGA GGACATTCGGCTGTAGCAACTGTAGCAACTTTGAGTGAGACAGAGCGCGT GAAGAGAGGGAAGGCGGCCGCCCAAGGTATTGTAGATGGCGGCAGTATCT CAACAATCAACACGTGTTCTCATTTTGTTTCTGTAATCCGGAGGGAGTAG CTTAGCCTCCCCCATGTACATGACATGACGCCCCCTCACCGGGGTCCCGG GTCATGGCGTTTAGAAGCACTTTGTGTTTTCCACCGCACTGAGATGAGAC TGACGTCTTTTTCATCGGCCAGCCGGTTAGCGCGGTCGATTCTAACACTA AAAACACGCTCACACACCCAGAAAACACGTGTTATTGTTGTTGCTGTTGC TACGCATTCTTGCTTCTTGGTTCCTTCCGTCAGCAACGCCTGCTTTGGTT TCGACAAGACGACGGGCTGGACGTTCTTCGACCTTACGGCGATGCACGAC TCCCTCGACAAGAGCGAGGGGACGGTTTTGGAGGCCGACTTCTACCACGC GGACCAGCTGCTGCCGCGATCGGACCAAGACCTTGTCAACAAGGTGAGAA CCTTGTCGACAACGTGA
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Coding sequence (CDS) from alignment at E-fasciculatus_F_contig12354:448..3664-

>mRNA_E-fasciculatus_F_contig12354.1814.1 ID=mRNA_E-fasciculatus_F_contig12354.1814.1|Name=mRNA_E-fasciculatus_F_contig12354.1814.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1128bp|location=Sequence derived from alignment at E-fasciculatus_F_contig12354:448..3664- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
ATGCTGTACTTCTTCATCCTGGCGCACCAGGCAGACTTCGACGTGAAGTG
GTGCAGGGGCACCACGGGAGAGATGATCTTCAAGCCGTGGGTGCAGAGGA
TAGAGGAGAACGGAGCGAAGGTGCTGGTGGAAAAATGCTGTACTTCTTCA
TCCTGGCGCACCAGGCAGACTTCGACGTGAAGTGGTGCAGGGGCACCACG
GGAGAGATGATCTTCAAGCCGTGGGTGCAGAGGATAGAGGAGAACGGAGC
GAAGGTGCTGGTGGAAAAGCGCGTTAGCGACGTCGAGGTCTGCCCAGACA
CCGGGAGCGTGGTGTCCGTGTCGTGCGGGGACGAGTCGTTCCCGTGCGAC
GCGGTCGTGTCTGCGGTGGGCATCAACGGGGTCAAGGGCATCGTGAGGGC
GGCGCCGGAGCTGTCTAAGCTGCCGTTCTTCTCCAAGATGATGAATCTCA
GGCGCGTTAGCGACGTCGAGGTCTGCCCAGACACCGGGAGCGTGGTGTCC
GTGTCGTGCGGGGACGAGTCGTTCCCGTGCGACGCGGTCGTGTCTGCGGT
GGGCATCAACGGGGTCAAGGGCATCGTGAGGGCGGCGCCGGAGCTGTCTA
AGCTGCCGTTCTTCTCCAAGATGATGAATCTCAGGTCTGTGGACGCGCTT
GCGGTTCGGCTGTACCTGGACAGGAGGGTGAGGATACCCTACCAGAGGTC
TGTGGACGCGCTTGCGGTTCGGCTGTACCTGGACAGGAGGGTGAGGATAC
CCTACCAGAGCAACGCCTGCTTTGGTTTCGACAAGACGACGGGCTGGACG
TTCTTCGACCTTACGGCGATGCACGACTCCCTCGACAAGAGCGAGGGGAC
GGTTTTGGAGGCCGACTTCTACCACGCGGACCAGCTGCTGCCGCGATCGG
ACCAAGACCTTGTCAACAAGGTGAGAACCTTGTCGACAACGTGACAACGC
CTGCTTTGGTTTCGACAAGACGACGGGCTGGACGTTCTTCGACCTTACGG
CGATGCACGACTCCCTCGACAAGAGCGAGGGGACGGTTTTGGAGGCCGAC
TTCTACCACGCGGACCAGCTGCTGCCGCGATCGGACCAAGACCTTGTCAA
CAAGGTGAGAACCTTGTCGACAACGTGA
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