mRNA_E-fasciculatus_F_contig12354.1814.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig12354.1814.1 vs. uniprot
Match: D8LG87_ECTSI (Amine oxidase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LG87_ECTSI) HSP 1 Score: 369 bits (948), Expect = 1.690e-124 Identity = 181/186 (97.31%), Postives = 182/186 (97.85%), Query Frame = 1
Query: 1 GALGMLYFFILAHQADFDVKWCRGTTGEMIFKPWVQRIEENGAKVLVEKRVSDVEVCPDTGSVVSVSCGDESFPCDAVVSAVGINGVKGIVRAAPELSKLPFFSKMMNLRSVDALAVRLYLDRRVRIPYQSNACFGFDKTTGWTFFDLTAMHDSLDKSEGTVLEADFYHADQLLPRSDQDLVNKVR 558
GALGMLYFFILAHQADFDVKWCRGTTGEMIFKPWVQRIEENGAKVLVEKRVSDVEVCPDTG VVSVSCG ESFPCDAVVSAVGINGVKGIVRAAP LSKLPFFSKMMNLRSVDALAVRLYLDRRVRIPYQSNACFGFDKTTGWTFFDLTAMHDSLDKSEGTVLEADFYHADQLLPRSDQDLV KV+
Sbjct: 212 GALGMLYFFILAHQADFDVKWCRGTTGEMIFKPWVQRIEENGAKVLVEKRVSDVEVCPDTGRVVSVSCGGESFPCDAVVSAVGINGVKGIVRAAPGLSKLPFFSKMMNLRSVDALAVRLYLDRRVRIPYQSNACFGFDKTTGWTFFDLTAMHDSLDKSEGTVLEADFYHADQLLPRSDQDLVAKVQ 397
BLAST of mRNA_E-fasciculatus_F_contig12354.1814.1 vs. uniprot
Match: A0A6H5KSI6_9PHAE (Amino_oxidase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSI6_9PHAE) HSP 1 Score: 363 bits (933), Expect = 2.940e-121 Identity = 178/186 (95.70%), Postives = 181/186 (97.31%), Query Frame = 1
Query: 1 GALGMLYFFILAHQADFDVKWCRGTTGEMIFKPWVQRIEENGAKVLVEKRVSDVEVCPDTGSVVSVSCGDESFPCDAVVSAVGINGVKGIVRAAPELSKLPFFSKMMNLRSVDALAVRLYLDRRVRIPYQSNACFGFDKTTGWTFFDLTAMHDSLDKSEGTVLEADFYHADQLLPRSDQDLVNKVR 558
GALGMLYFFILAHQADFDVKWCRGTTGEMIFKPWVQRIEENGAKVLVEKRVSDVEVCPDTG VVSV+CG ESFPCDAVVSAVGINGVKGIVRAA LS+LPFFSKMMNLRSVDALAVRLYLDRRVRIPYQSNACFGFDKTTGWTFFDLTAMHDSLDKSEGTVLEADFYHADQLLPRSDQDLV KV+
Sbjct: 276 GALGMLYFFILAHQADFDVKWCRGTTGEMIFKPWVQRIEENGAKVLVEKRVSDVEVCPDTGRVVSVTCGGESFPCDAVVSAVGINGVKGIVRAARGLSRLPFFSKMMNLRSVDALAVRLYLDRRVRIPYQSNACFGFDKTTGWTFFDLTAMHDSLDKSEGTVLEADFYHADQLLPRSDQDLVAKVQ 461
BLAST of mRNA_E-fasciculatus_F_contig12354.1814.1 vs. uniprot
Match: I2CPM9_NANGC (Amine oxidase (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CPM9_NANGC) HSP 1 Score: 267 bits (683), Expect = 1.700e-87 Identity = 128/184 (69.57%), Postives = 148/184 (80.43%), Query Frame = 1
Query: 7 LGMLYFFILAHQADFDVKWCRGTTGEMIFKPWVQRIEENGAKVLVEKRVSDVEVCPDTGSVVSVSCGDESFPCDAVVSAVGINGVKGIVRAAPELSKLPFFSKMMNLRSVDALAVRLYLDRRVRIPYQSNACFGFDKTTGWTFFDLTAMHDSLDKSEGTVLEADFYHADQLLPRSDQDLVNKVR 558
LGMLY+FILAHQADFDV+W RGT GE+IF+PWV++I E G + KRVSD+ P+TG + V CGDE F DAVVSAVGING+K IVR +P LS+ FS MMNLRS+D LAVRLYLDR+V IPY+SNACFGFDKTTGWTFFDLT +HD L S TVLEADFYHADQLLP+SD+ LV KV+
Sbjct: 37 LGMLYYFILAHQADFDVQWVRGTVGELIFRPWVEKIRELGTNIQTSKRVSDLVQDPETGRITGVRCGDEVFEADAVVSAVGINGLKAIVRNSPVLSRRKMFSDMMNLRSIDVLAVRLYLDRKVSIPYKSNACFGFDKTTGWTFFDLTQLHDELADSPVTVLEADFYHADQLLPQSDEALVAKVK 220
BLAST of mRNA_E-fasciculatus_F_contig12354.1814.1 vs. uniprot
Match: UPI0019FF2D9A (FAD-dependent oxidoreductase n=1 Tax=Synechococcales cyanobacterium M55_K2018_004 TaxID=2774347 RepID=UPI0019FF2D9A) HSP 1 Score: 237 bits (604), Expect = 8.270e-73 Identity = 115/192 (59.90%), Postives = 142/192 (73.96%), Query Frame = 1
Query: 4 ALGMLYFFILAHQADFDVKWCRGTTGEMIFKPWVQRIEENGAKVLVEKRVSDVEVCPDTGSVVS--VSCGDESFPCDAVVSAVGINGVKGIVRAAPELSKLPFFSKMMNLRSVDALAVRLYLDRRVRIPYQSNACFGFDKTTGWTFFDLTAMHDSLDKSEGTVLEADFYHADQLLPRSDQDLVNKV-RTLST 570
ALGMLY+FILAHQ DFDV WCRGT GEMIF+PWV+RIE+ G KVL ++RV+DV + T V+ V CGD+ F DAV+ AVG+ G++ IV + L + P F +MNL +VD LA RL+ DR+V IPY SNACFGFD TTGWTFF+L A+HD GTVLEADFYHA+QLLPR+D +V K+ R L+T
Sbjct: 193 ALGMLYYFILAHQPDFDVVWCRGTVGEMIFRPWVERIEQAGGKVLTQRRVTDVVLESSTSGPVAKAVVCGDDVFAADAVIFAVGVTGIQKIVGGSESLRQFPEFCSLMNLGAVDVLATRLWFDRKVTIPYASNACFGFDNTTGWTFFNLNALHDEFHDEPGTVLEADFYHANQLLPRTDAQIVEKLQRDLAT 384
BLAST of mRNA_E-fasciculatus_F_contig12354.1814.1 vs. uniprot
Match: UPI0016889928 (FAD-dependent oxidoreductase n=1 Tax=Oscillatoria sp. FACHB-1407 TaxID=2692847 RepID=UPI0016889928) HSP 1 Score: 235 bits (599), Expect = 4.730e-72 Identity = 112/192 (58.33%), Postives = 144/192 (75.00%), Query Frame = 1
Query: 4 ALGMLYFFILAHQADFDVKWCRGTTGEMIFKPWVQRIEENGAKVLVEKRVSDV--EVCPDTGSVVSVSCGDESFPCDAVVSAVGINGVKGIVRAAPELSKLPFFSKMMNLRSVDALAVRLYLDRRVRIPYQSNACFGFDKTTGWTFFDLTAMHDSLDKSEGTVLEADFYHADQLLPRSDQDLVNKV-RTLST 570
ALGMLY+FILAHQ +FDV WCRGT GEMIF+PWV+RIE+ G +VL ++RV+DV E +T V CG+E F DAV+ AVG+ G++ IV +P L +LP F K+MNL ++D LA RL+ DR+V +P SNACFGFD TTGWTFFDL +HD ++EG+V+EADFYHA+QLLP D+ +V KV R L+T
Sbjct: 195 ALGMLYYFILAHQPNFDVVWCRGTVGEMIFRPWVERIEQAGGRVLTQRRVTDVRLETVGETLKATGVVCGNEVFEADAVIFAVGVTGMQKIVSNSPNLRRLPEFCKLMNLGAIDVLATRLWFDRKVSVPRPSNACFGFDTTTGWTFFDLNTLHDEWQEAEGSVIEADFYHANQLLPLEDEQIVAKVHRDLAT 386
BLAST of mRNA_E-fasciculatus_F_contig12354.1814.1 vs. uniprot
Match: UPI00034B8036 (FAD-dependent oxidoreductase n=1 Tax=Synechococcus sp. PCC 7336 TaxID=195250 RepID=UPI00034B8036) HSP 1 Score: 234 bits (598), Expect = 6.350e-72 Identity = 113/190 (59.47%), Postives = 137/190 (72.11%), Query Frame = 1
Query: 4 ALGMLYFFILAHQADFDVKWCRGTTGEMIFKPWVQRIEENGAKVLVEKRVSDVEVCPDTGSVVSVSCGDESFPCDAVVSAVGINGVKGIVRAAPELSKLPFFSKMMNLRSVDALAVRLYLDRRVRIPYQSNACFGFDKTTGWTFFDLTAMHDSLDKSEGTVLEADFYHADQLLPRSDQDLVNKVRTLSTT 573
ALGMLY+FILAHQ DFDV WCRGT G+ IF+PWV RIE G KVL E+RVSD+ V G +V CGDE F DAV+ AVGI+G++ IVR + L P F +MNLRS+D +A RL+ DR+V +P SNACFGFD TGWTFFDL +HD + GTV+EADFYHAD+LLP SD+ +V KV+ TT
Sbjct: 194 ALGMLYYFILAHQPDFDVVWCRGTIGKWIFQPWVDRIETAGGKVLTERRVSDL-VLDKRGRAKAVVCGDERFDADAVIFAVGISGMQAIVRGSESLRSRPEFLDVMNLRSIDVMATRLWFDRKVEVPLPSNACFGFDPATGWTFFDLNTLHDEFRDAPGTVIEADFYHADRLLPMSDEQIVRKVQRDLTT 382
BLAST of mRNA_E-fasciculatus_F_contig12354.1814.1 vs. uniprot
Match: UPI000349D2CD (FAD-dependent oxidoreductase n=1 Tax=Geminocystis herdmanii TaxID=669359 RepID=UPI000349D2CD) HSP 1 Score: 234 bits (597), Expect = 8.530e-72 Identity = 111/190 (58.42%), Postives = 137/190 (72.11%), Query Frame = 1
Query: 4 ALGMLYFFILAHQADFDVKWCRGTTGEMIFKPWVQRIEENGAKVLVEKRVSDVEVCPDTGSVVSVSCGDESFPCDAVVSAVGINGVKGIVRAAPELSKLPFFSKMMNLRSVDALAVRLYLDRRVRIPYQSNACFGFDKTTGWTFFDLTAMHDSLDKSEGTVLEADFYHADQLLPRSDQDLVNKVRTLSTT 573
ALGMLY+FILAHQ +FDV WCRGT GEMIF+PW+++IEE G KVL KRV+D+ V G +V CG+E F +AV+S V I+G+K IV +P LSK F + NLRS+D LAVRL+ DRR+ IP SNACFGFD TTGWTFFDL +HD EG+V+E DFYHA+QLL SD+ ++ KV TT
Sbjct: 193 ALGMLYYFILAHQPNFDVMWCRGTVGEMIFQPWIEKIEELGGKVLTNKRVTDI-VIDTEGKATAVVCGEEVFEAEAVISGVSISGIKKIVSNSPNLSKYQEFRNLQNLRSIDVLAVRLWFDRRINIPLSSNACFGFDATTGWTFFDLNTLHDKYKDEEGSVIEVDFYHANQLLSMSDERILQKVHQDLTT 381
BLAST of mRNA_E-fasciculatus_F_contig12354.1814.1 vs. uniprot
Match: A0A7Y5M9Z3_9CYAN (FAD-dependent oxidoreductase n=1 Tax=Pseudanabaena biceps TaxID=927669 RepID=A0A7Y5M9Z3_9CYAN) HSP 1 Score: 234 bits (596), Expect = 1.200e-71 Identity = 113/190 (59.47%), Postives = 139/190 (73.16%), Query Frame = 1
Query: 4 ALGMLYFFILAHQADFDVKWCRGTTGEMIFKPWVQRIEENGAKVLVEKRVSDVEVCPDTGSVVSVSCGDESFPCDAVVSAVGINGVKGIVRAAPELSKLPFFSKMMNLRSVDALAVRLYLDRRVRIPYQSNACFGFDKTTGWTFFDLTAMHDSLDKSEGTVLEADFYHADQLLPRSDQDLVNKVRTLSTT 573
ALGMLY+FILAHQADFDV WCRGT GE IFKPW RI G K+L ++RVSDV V +G V +V CGDESF DAV+ AVGI+G++ IV +P L K F +MNL +VD LAVRL+ DR++ IP SNACFGFDKTTGWTFFDL A+HD + G+V+E DFYHA+Q LP +Q+++ V+ TT
Sbjct: 193 ALGMLYYFILAHQADFDVVWCRGTVGEKIFKPWCDRITGLGGKILTDRRVSDVSVDV-SGKVNAVICGDESFEADAVIFAVGISGIQKIVTTSPALQKRREFRNLMNLGAVDVLAVRLWCDRKINIPRPSNACFGFDKTTGWTFFDLNALHDEFADASGSVIEVDFYHANQFLPLDNQEIIQIVQEYLTT 381
BLAST of mRNA_E-fasciculatus_F_contig12354.1814.1 vs. uniprot
Match: A0A563W554_9CYAN (Amino_oxidase domain-containing protein n=2 Tax=Pleurocapsales TaxID=52604 RepID=A0A563W554_9CYAN) HSP 1 Score: 232 bits (592), Expect = 4.760e-71 Identity = 109/190 (57.37%), Postives = 135/190 (71.05%), Query Frame = 1
Query: 4 ALGMLYFFILAHQADFDVKWCRGTTGEMIFKPWVQRIEENGAKVLVEKRVSDVEVCPDTGSVVSVSCGDESFPCDAVVSAVGINGVKGIVRAAPELSKLPFFSKMMNLRSVDALAVRLYLDRRVRIPYQSNACFGFDKTTGWTFFDLTAMHDSLDKSEGTVLEADFYHADQLLPRSDQDLVNKV-RTLST 570
ALGMLY+FILAHQ DFDV WCRGT GE IFKPW+ +IE+ G KVL KRVSD+ V TG + V CGDE F DA++S V I G+K IV ++ L+ F + NL+ +D LA RL+ DR++ IP SNACFGFD TTGWTFFDL +HD TV+EADFYHA+QLLP +D+ ++NKV R +ST
Sbjct: 196 ALGMLYYFILAHQPDFDVVWCRGTVGEKIFKPWIAKIEKAGGKVLTNKRVSDI-VVDKTGKTIGVKCGDEFFAADAIISGVSITGMKKIVESSSNLNNYAQFRNLANLKGIDVLATRLWFDRKINIPLPSNACFGFDATTGWTFFDLNDLHDEYQNEPNTVIEADFYHANQLLPMTDEQIINKVHRDVST 384
BLAST of mRNA_E-fasciculatus_F_contig12354.1814.1 vs. uniprot
Match: A0A2W4VRS4_9CYAN (Amine oxidase n=2 Tax=Pseudanabaena TaxID=1152 RepID=A0A2W4VRS4_9CYAN) HSP 1 Score: 232 bits (591), Expect = 6.710e-71 Identity = 114/190 (60.00%), Postives = 138/190 (72.63%), Query Frame = 1
Query: 4 ALGMLYFFILAHQADFDVKWCRGTTGEMIFKPWVQRIEENGAKVLVEKRVSDVEVCPDTGSVVSVSCGDESFPCDAVVSAVGINGVKGIVRAAPELSKLPFFSKMMNLRSVDALAVRLYLDRRVRIPYQSNACFGFDKTTGWTFFDLTAMHDSLDKSEGTVLEADFYHADQLLPRSDQDLVNKVRTLSTT 573
ALGMLY+FILAHQADFDV WCRGT GE IFKPW RI + G K+L +RVSDV V +TG V SV CGDESF DAV+ AVGI+G++ IV +P L K F +MNL ++D LAVRL+ DR+++IP SNACFGFD TTGWTFFDL A+HD G+V+E DFYHA+Q LP Q++V V+ TT
Sbjct: 193 ALGMLYYFILAHQADFDVVWCRGTVGEKIFKPWCDRITDLGGKILTNRRVSDVCV-DETGKVTSVVCGDESFDADAVIFAVGISGMQKIVANSPTLQKRREFRNLMNLGAIDVLAVRLWFDRKIQIPRPSNACFGFDVTTGWTFFDLNALHDEYADEAGSVIEIDFYHANQFLPLDRQEIVAIVQRYLTT 381 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig12354.1814.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig12354.1814.1 >prot_E-fasciculatus_F_contig12354.1814.1 ID=prot_E-fasciculatus_F_contig12354.1814.1|Name=mRNA_E-fasciculatus_F_contig12354.1814.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=188bp MLYFFILAHQADFDVKWCRGTTGEMIFKPWVQRIEENGAKVLVEKRVSDVback to top mRNA from alignment at E-fasciculatus_F_contig12354:448..3664- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig12354.1814.1 ID=mRNA_E-fasciculatus_F_contig12354.1814.1|Name=mRNA_E-fasciculatus_F_contig12354.1814.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=3217bp|location=Sequence derived from alignment at E-fasciculatus_F_contig12354:448..3664- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig12354:448..3664- >mRNA_E-fasciculatus_F_contig12354.1814.1 ID=mRNA_E-fasciculatus_F_contig12354.1814.1|Name=mRNA_E-fasciculatus_F_contig12354.1814.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1128bp|location=Sequence derived from alignment at E-fasciculatus_F_contig12354:448..3664- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |