mRNA_E-fasciculatus_F_contig1235.1813.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig1235.1813.1 vs. uniprot
Match: A0A6H5L576_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L576_9PHAE) HSP 1 Score: 934 bits (2415), Expect = 0.000e+0 Identity = 545/655 (83.21%), Postives = 568/655 (86.72%), Query Frame = 1
Query: 1 MSSAWTKGDRRAKKQLEKSLGSDQDDHVTRFALVRLLASKADPVAAEELLRGPGVEDRLLADPNTHVAMLSSLGGAYLMLWRARGETTFGSNGSRAGGGQGKDTREVVEIRLDVSSERTDLLHRAQHFLEEALLAPKNLNDPAIRAQV-------------------------------------------AFCKEARGDCKEALALYASIISDSALSPGASAVIFRTSVLLAYVGRFDECVRYLEFIEGQPPKGCSMLLVQALLYTCYVSLGLEMKASRRLITLREAYNDEYTAGRMGGGFSREEIPWDRLPGWFYMWRELGIKSLRAGDYYAGIQMFSQATLQREDPETMVCTAEMLWVLGEAKRALALCERAYAADPLHIGAQRRLSGWAPKKWKDRIVKEEERREAVTEMRRLADLSDRKADAMLARRRRREKARFLRAWRRLHEKRKHRTRXXXXXXXXXXXXXXXXXXXXXXXSGSDEMSRSDSSSSRSGSSSXXXXARSXXXXXXXXXXXXXXXXASSLSAKEQLEPSVDEKSLASSAPVPEPFPVPSAAEAAEAGRSNFSACFRAETERAMRRRREANGHQRQVPMDMASVKVAAEAVHEAMRGGGRRTGANGARSGFATHEMRALARFQWHRKTHEAKITKVVYGS 1836
MS AWTKGD RAKKQLEKSL SDQDDHVTRFALVRLLASKA+P AAEELLRGPGVEDRLLADPNT VAMLSSLGGAYLMLWRARGETT S GSRAGGGQGKDTREVVEIRLDVSSERTDLLHRAQHFLEEAL++P+NLNDPAIRAQV AFCKEARGD KEAL LYASIISDSALSPGASAVIFRTSVLLAYVGR DECVRYLEFIEGQPPKGCSMLLVQALLYTCYVSLGLE+K SRRLITLREAYNDEYTAGRMG GFSR+EIPWDRLPGWFYMWRELG++S+RAG+YYAGIQMFSQATLQR+DPETMVCTAEMLWVLGE KRALALCERAYAADPLHIGAQRRLSGWAP+KWK+RIVKEEERREA+TEMRRLADLSD+KADAMLARRRRREKARFLRAWRRLH+K KHR XXXXXXXXXXXX GSD+ S SDSSSSRSGSSSXXXX XXXXXXXXXXXXXXX ASSLSAKEQ+E SVDEKS ASSAPVPEPFPVPSAAEAAEAGRSNFSACFRAETERAMRR+REA H ++PMDMASVKVAAEA+HEAMRGGG +TG NGARSGFATHEMRALARFQ HRKTHEAKITKVVYGS
Sbjct: 1 MSLAWTKGDWRAKKQLEKSLSSDQDDHVTRFALVRLLASKAEPAAAEELLRGPGVEDRLLADPNTRVAMLSSLGGAYLMLWRARGETTSESTGSRAGGGQGKDTREVVEIRLDVSSERTDLLHRAQHFLEEALMSPENLNDPAIRAQVGERGKWKSVLRLPGLARLPPSRLSLFRPDIRSLLHPDCCAFKKAFCKEARGDYKEALTLYASIISDSALSPGASAVIFRTSVLLAYVGRLDECVRYLEFIEGQPPKGCSMLLVQALLYTCYVSLGLEVKVSRRLITLREAYNDEYTAGRMGRGFSRDEIPWDRLPGWFYMWRELGVESIRAGNYYAGIQMFSQATLQRQDPETMVCTAEMLWVLGEPKRALALCERAYAADPLHIGAQRRLSGWAPQKWKERIVKEEERREAITEMRRLADLSDKKADAMLARRRRREKARFLRAWRRLHDKHKHRRSTSTEGEEAQTGXXXXXXXXXXXXXGSDKFSWSDSSSSRSGSSSXXXXXXXXXXXXXXXXXXXXXXFASSLSAKEQVERSVDEKSSASSAPVPEPFPVPSAAEAAEAGRSNFSACFRAETERAMRRKREATEHHGEMPMDMASVKVAAEAIHEAMRGGGWKTGTNGARSGFATHEMRALARFQCHRKTHEAKITKVVYGS 655 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1235.1813.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 1
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig1235.1813.1 >prot_E-fasciculatus_F_contig1235.1813.1 ID=prot_E-fasciculatus_F_contig1235.1813.1|Name=mRNA_E-fasciculatus_F_contig1235.1813.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=613bp MSSAWTKGDRRAKKQLEKSLGSDQDDHVTRFALVRLLASKADPVAAEELLback to top mRNA from alignment at E-fasciculatus_F_contig1235:11353..16151- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig1235.1813.1 ID=mRNA_E-fasciculatus_F_contig1235.1813.1|Name=mRNA_E-fasciculatus_F_contig1235.1813.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=4799bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1235:11353..16151- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig1235:11353..16151- >mRNA_E-fasciculatus_F_contig1235.1813.1 ID=mRNA_E-fasciculatus_F_contig1235.1813.1|Name=mRNA_E-fasciculatus_F_contig1235.1813.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=3678bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1235:11353..16151- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |