prot_E-fasciculatus_F_contig1235.1813.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig1235.1813.1
Unique Nameprot_E-fasciculatus_F_contig1235.1813.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length613
Homology
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BLAST of mRNA_E-fasciculatus_F_contig1235.1813.1 vs. uniprot
Match: A0A6H5L576_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L576_9PHAE)

HSP 1 Score: 934 bits (2415), Expect = 0.000e+0
Identity = 545/655 (83.21%), Postives = 568/655 (86.72%), Query Frame = 0 
Query:    1 MSSAWTKGDRRAKKQLEKSLGSDQDDHVTRFALVRLLASKADPVAAEELLRGPGVEDRLLADPNTHVAMLSSLGGAYLMLWRARGETTFGSNGSRAGGGQGKDTREVVEIRLDVSSERTDLLHRAQHFLEEALLAPKNLNDPAIRAQV-------------------------------------------AFCKEARGDCKEALALYASIISDSALSPGASAVIFRTSVLLAYVGRFDECVRYLEFIEGQPPKGCSMLLVQALLYTCYVSLGLEMKASRRLITLREAYNDEYTAGRMGGGFSREEIPWDRLPGWFYMWRELGIKSLRAGDYYAGIQMFSQATLQREDPETMVCTAEMLWVLGEAKRALALCERAYAADPLHIGAQRRLSGWAPKKWKDRIVKEEERREAVTEMRRLADLSDRKADAMLARRRRREKARFLRAWRRLHEKRKHRTRXXXXXXXXXXXXXXXXXXXXXXXSGSDEMSRSDSSSSRSGSSSXXXXARSXXXXXXXXXXXXXXXXASSLSAKEQLEPSVDEKSLASSAPVPEPFPVPSAAEAAEAGRSNFSACFRAETERAMRRRREANGHQRQVPMDMASVKVAAEAVHEAMRGGGRRTGANGARSGFATHEMRALARFQWHRKTHEAKITKVVYGS 612
            MS AWTKGD RAKKQLEKSL SDQDDHVTRFALVRLLASKA+P AAEELLRGPGVEDRLLADPNT VAMLSSLGGAYLMLWRARGETT  S GSRAGGGQGKDTREVVEIRLDVSSERTDLLHRAQHFLEEAL++P+NLNDPAIRAQV                                           AFCKEARGD KEAL LYASIISDSALSPGASAVIFRTSVLLAYVGR DECVRYLEFIEGQPPKGCSMLLVQALLYTCYVSLGLE+K SRRLITLREAYNDEYTAGRMG GFSR+EIPWDRLPGWFYMWRELG++S+RAG+YYAGIQMFSQATLQR+DPETMVCTAEMLWVLGE KRALALCERAYAADPLHIGAQRRLSGWAP+KWK+RIVKEEERREA+TEMRRLADLSD+KADAMLARRRRREKARFLRAWRRLH+K KHR             XXXXXXXXXXXX GSD+ S SDSSSSRSGSSSXXXX   XXXXXXXXXXXXXXX ASSLSAKEQ+E SVDEKS ASSAPVPEPFPVPSAAEAAEAGRSNFSACFRAETERAMRR+REA  H  ++PMDMASVKVAAEA+HEAMRGGG +TG NGARSGFATHEMRALARFQ HRKTHEAKITKVVYGS
Sbjct:    1 MSLAWTKGDWRAKKQLEKSLSSDQDDHVTRFALVRLLASKAEPAAAEELLRGPGVEDRLLADPNTRVAMLSSLGGAYLMLWRARGETTSESTGSRAGGGQGKDTREVVEIRLDVSSERTDLLHRAQHFLEEALMSPENLNDPAIRAQVGERGKWKSVLRLPGLARLPPSRLSLFRPDIRSLLHPDCCAFKKAFCKEARGDYKEALTLYASIISDSALSPGASAVIFRTSVLLAYVGRLDECVRYLEFIEGQPPKGCSMLLVQALLYTCYVSLGLEVKVSRRLITLREAYNDEYTAGRMGRGFSRDEIPWDRLPGWFYMWRELGVESIRAGNYYAGIQMFSQATLQRQDPETMVCTAEMLWVLGEPKRALALCERAYAADPLHIGAQRRLSGWAPQKWKERIVKEEERREAITEMRRLADLSDKKADAMLARRRRREKARFLRAWRRLHDKHKHRRSTSTEGEEAQTGXXXXXXXXXXXXXGSDKFSWSDSSSSRSGSSSXXXXXXXXXXXXXXXXXXXXXXFASSLSAKEQVERSVDEKSSASSAPVPEPFPVPSAAEAAEAGRSNFSACFRAETERAMRRKREATEHHGEMPMDMASVKVAAEAIHEAMRGGGWKTGTNGARSGFATHEMRALARFQCHRKTHEAKITKVVYGS 655
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1235.1813.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5L576_9PHAE0.000e+083.21Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 360..380
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 232..423
e-value: 1.6E-5
score: 26.4
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 9..209
e-value: 3.3E-6
score: 29.0
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 270..346

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig1235contigE-fasciculatus_F_contig1235:11353..16151 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig1235.1813.1mRNA_E-fasciculatus_F_contig1235.1813.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig1235 11353..16151 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig1235.1813.1 ID=prot_E-fasciculatus_F_contig1235.1813.1|Name=mRNA_E-fasciculatus_F_contig1235.1813.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=613bp
MSSAWTKGDRRAKKQLEKSLGSDQDDHVTRFALVRLLASKADPVAAEELL
RGPGVEDRLLADPNTHVAMLSSLGGAYLMLWRARGETTFGSNGSRAGGGQ
GKDTREVVEIRLDVSSERTDLLHRAQHFLEEALLAPKNLNDPAIRAQVAF
CKEARGDCKEALALYASIISDSALSPGASAVIFRTSVLLAYVGRFDECVR
YLEFIEGQPPKGCSMLLVQALLYTCYVSLGLEMKASRRLITLREAYNDEY
TAGRMGGGFSREEIPWDRLPGWFYMWRELGIKSLRAGDYYAGIQMFSQAT
LQREDPETMVCTAEMLWVLGEAKRALALCERAYAADPLHIGAQRRLSGWA
PKKWKDRIVKEEERREAVTEMRRLADLSDRKADAMLARRRRREKARFLRA
WRRLHEKRKHRTRRSAEDEEARGGSRRGDDTTTSRSSGSDEMSRSDSSSS
RSGSSSSSGSARSSHSGDGSSRSGRSSSFASSLSAKEQLEPSVDEKSLAS
SAPVPEPFPVPSAAEAAEAGRSNFSACFRAETERAMRRRREANGHQRQVP
MDMASVKVAAEAVHEAMRGGGRRTGANGARSGFATHEMRALARFQWHRKT
HEAKITKVVYGS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf