mRNA_E-fasciculatus_F_contig1215.1672.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig1215.1672.1 vs. uniprot
Match: D8LJC1_ECTSI (Ankyrin repeat protein (Partial) (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJC1_ECTSI) HSP 1 Score: 68.6 bits (166), Expect = 4.160e-11 Identity = 45/98 (45.92%), Postives = 62/98 (63.27%), Query Frame = 1
Query: 28 SALGLAAESGEIGAMCVMLERGEDVNVSDPPTSAHCRTALHWAAFSNNEVVIELLVEAGASVQAVGKGHE----SPLHVSAERSALEAARALLRHGAD 309
SALGLAA G + M ++ G DVN P S C TALH AA + I++L+EAGAS+ A G G + +PLHV++E+ + EAA +L++HGAD
Sbjct: 109 SALGLAARGGHVEVMQALIRHGVDVNA---PDSNGC-TALHSAAIGDAVGAIDVLIEAGASIDAQG-GEDGEMYTPLHVASEKGSSEAALSLVKHGAD 201
BLAST of mRNA_E-fasciculatus_F_contig1215.1672.1 vs. uniprot
Match: D7G751_ECTSI (Ankyrin repeat protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G751_ECTSI) HSP 1 Score: 67.8 bits (164), Expect = 8.190e-11 Identity = 44/97 (45.36%), Postives = 60/97 (61.86%), Query Frame = 1
Query: 28 SALGLAAESGEIGAMCVMLERGEDVNVSDPPTSAHCRTALHWAAFSNNEVVIELLVEAGASVQAVGK---GHESPLHVSAERSALEAARALLRHGAD 309
SALGLAA G + M ++ G DV D P S C TALH AA + I++L+EAGAS+ A G +PLHV++E+ + EAA +L++HGAD
Sbjct: 178 SALGLAARGGHVEVMQALIRHGVDV---DGPDSNGC-TALHSAAIGDAVGAIDVLIEAGASIDAQGGEDGARYTPLHVASEQGSSEAALSLVKHGAD 270
BLAST of mRNA_E-fasciculatus_F_contig1215.1672.1 vs. uniprot
Match: A0A439CPV3_9PEZI (Helo_like_N domain-containing protein n=2 Tax=Fungi TaxID=4751 RepID=A0A439CPV3_9PEZI) HSP 1 Score: 58.5 bits (140), Expect = 1.390e-7 Identity = 31/73 (42.47%), Postives = 45/73 (61.64%), Query Frame = 1
Query: 136 RTALHWAAFSNNEVVIELLVEAGASVQAVGKGHESPLH---VSAERSALEAARALLRHGADSNATDAFRQTPL 345
RT LHWA + N +E+L+E GAS V K H +PLH ++ S ++ R L+ GAD +A DA+++TPL
Sbjct: 460 RTPLHWAVITGNISAVEILIEHGASPTCVDKQHMTPLHAMYLAPSSSQMQCGRILIDSGADVDALDAWKRTPL 532
BLAST of mRNA_E-fasciculatus_F_contig1215.1672.1 vs. uniprot
Match: T0RJS5_SAPDV (Uncharacterized protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0RJS5_SAPDV) HSP 1 Score: 57.0 bits (136), Expect = 2.350e-7 Identity = 45/119 (37.82%), Postives = 64/119 (53.78%), Query Frame = 1
Query: 16 VIRRSALGLAAESGEIGAMCVMLERGEDVNVSDPPTSAHCRTALHWAAFSNNEVVIELLVEAGASVQAVGKGHESPLHVSAERSALEAARALL--------RHGADSNATDAFRQTPLH 348
VI+R L A G+ +C +L++G VNV + A RTALH AA +N + ELLV AGA + AV +PL V+ E + ++ A LL R GAD +A +++ PLH
Sbjct: 56 VIKR--LWAAVNKGDGNRVCALLKQGVPVNVRN----ATGRTALHAAAAANQNAIAELLVAAGAEIDAVAVDGRTPLIVAVESNGVDIANQLLQARASVHMRVGADDSAAASWQ--PLH 166
BLAST of mRNA_E-fasciculatus_F_contig1215.1672.1 vs. uniprot
Match: D7G1A4_ECTSI (Similar to ankyrin 2,3/unc44 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1A4_ECTSI) HSP 1 Score: 56.2 bits (134), Expect = 9.000e-7 Identity = 44/109 (40.37%), Postives = 57/109 (52.29%), Query Frame = 1
Query: 28 SALGLAAESGEIGAMCVMLERGEDVNVSDPPTSAHCRTALHWAAFSNNEVVIELLVEAGASVQAVGKGHE--SPLHVSAERSALEAARALLRHGADSNATDAFRQTPLH 348
SAL LAA G + +++ G DVN SD TAL+ AA ++ I++LV+AGA V+A G S LHV+ + EA ALL H A DA TPLH
Sbjct: 165 SALDLAACGGHQQILKMLIRHGCDVNASDSDGV----TALYLAALNDQPYSIDVLVKAGAKVEARSPGRHRWSALHVACAYGSNEAVSALLTHDALLFGRDASNHTPLH 269
BLAST of mRNA_E-fasciculatus_F_contig1215.1672.1 vs. uniprot
Match: A0A6J1SLX4_FRAOC (RING-type E3 ubiquitin transferase n=1 Tax=Frankliniella occidentalis TaxID=133901 RepID=A0A6J1SLX4_FRAOC) HSP 1 Score: 55.5 bits (132), Expect = 1.640e-6 Identity = 35/107 (32.71%), Postives = 55/107 (51.40%), Query Frame = 1
Query: 28 SALGLAAESGEIGAMCVMLERGEDVNVSDPPTSAHCRTALHWAAFSNNEVVIELLVEAGASVQAVGKGHESPLHVSAERSALEAARALLRHGADSNATDAFRQTPLH 348
+AL A+++G + + ++L DV + D A+H AAF + VV+ELL +AGA + A K ++ LH+S + L + LL G + D TPLH
Sbjct: 462 TALQAASQNGHLEVIKILLFHKADVEIEDNDGDR----AVHHAAFGDEPVVMELLAQAGADLNARNKRRQTALHISVNKGHLSVVKNLLALGCHPSLQDEDGDTPLH 564
BLAST of mRNA_E-fasciculatus_F_contig1215.1672.1 vs. uniprot
Match: A0A371B0Q6_9HYPH (Ankyrin repeat domain-containing protein n=1 Tax=Pseudolabrys sp. GY_H TaxID=2292256 RepID=A0A371B0Q6_9HYPH) HSP 1 Score: 54.3 bits (129), Expect = 2.390e-6 Identity = 32/74 (43.24%), Postives = 44/74 (59.46%), Query Frame = 1
Query: 106 VSDPPTSAHCRTALHWAAFSNNEVVIELLVEAGASVQAVGKGHESPLHVSAERSALEAARALLRHGADSNATDA 327
V+ T LH AA + + +E LV+ GA+++A KG +PLHV+ +AARALLR GAD+NA DA
Sbjct: 21 VAPDATEIAAYQGLHAAAAAGDAAAVERLVKNGAALEARDKGGRTPLHVAVHLKKADAARALLRLGADANALDA 94
BLAST of mRNA_E-fasciculatus_F_contig1215.1672.1 vs. uniprot
Match: UPI001D04B541 (uncharacterized protein n=1 Tax=Diaporthe batatas TaxID=748121 RepID=UPI001D04B541) HSP 1 Score: 52.4 bits (124), Expect = 2.020e-5 Identity = 34/72 (47.22%), Postives = 43/72 (59.72%), Query Frame = 1
Query: 136 RTALHWAAFSNNEVVIELLVEAGASVQAVGKGH-ESPLHVSAERSAL-EAARALLRHGADSNATDAFRQTPL 345
RTAL WAA + I L+EAGA ++ + E+PL ++ A EA R LL GAD NATD +RQTPL
Sbjct: 547 RTALQWAAAKGDATAISELLEAGAQLEYKTRMRSETPLLIACRTGANPEAVRTLLAAGADINATDCYRQTPL 618
BLAST of mRNA_E-fasciculatus_F_contig1215.1672.1 vs. uniprot
Match: H2TMD5_TAKRU (SOCS box domain-containing protein n=4 Tax=Takifugu TaxID=31032 RepID=H2TMD5_TAKRU) HSP 1 Score: 51.6 bits (122), Expect = 3.500e-5 Identity = 41/107 (38.32%), Postives = 56/107 (52.34%), Query Frame = 1
Query: 31 ALGLAAESGEIGAMCVMLERGEDVNVSDPPTSAHCRTALHWAAFSNNEVVIELLVEAGASVQAVGKGHES-PLHVSAERSA-LEAARALLRHGADSNATDAFRQTPL 345
AL AE G + A ++L G D+N DP + + LH A N ++ LLV GA ++ + HES PL +++E S L LL GAD NA D R+TPL
Sbjct: 69 ALFKVAERGLLYAAEILLRYGADLNFEDPVSYYN---PLHVAVLRNRPTMVRLLVSHGADIEKRDRIHESSPLDLASEESERLLCLLTLLDMGADVNAGDKHRKTPL 172
BLAST of mRNA_E-fasciculatus_F_contig1215.1672.1 vs. uniprot
Match: UPI0009B9FCEE (ankyrin repeat domain-containing protein n=1 Tax=Corynebacterium pacaense TaxID=1816684 RepID=UPI0009B9FCEE) HSP 1 Score: 50.1 bits (118), Expect = 4.220e-5 Identity = 35/108 (32.41%), Postives = 60/108 (55.56%), Query Frame = 1
Query: 25 RSALGLAAESGEIGAMCVMLERGEDVNVSDPPTSAHCRTALHWAAFSNNEVVIELLVEAGASVQAVGKGHESPLHVSAERSALEAARA--LLRHGADSNATDAFRQTP 342
R+ L AAE+G + + +L+ G D ++DP TALH+AA ++ +IE+L++AGA++ A +PL + + ++A LLR GAD + D+ +P
Sbjct: 51 RTVLMRAAEAGNLLFVARLLDMGADSAITDPTGL----TALHYAAIEGDDGIIEILIDAGANLDAPDDRDRTPLWYACAHNLPDSAAVEILLRAGADCHRRDSSGVSP 154 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1215.1672.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 24
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig1215.1672.1 >prot_E-fasciculatus_F_contig1215.1672.1 ID=prot_E-fasciculatus_F_contig1215.1672.1|Name=mRNA_E-fasciculatus_F_contig1215.1672.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=117bp NTCATVIRRSALGLAAESGEIGAMCVMLERGEDVNVSDPPTSAHCRTALHback to top mRNA from alignment at E-fasciculatus_F_contig1215:19011..19361+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig1215.1672.1 ID=mRNA_E-fasciculatus_F_contig1215.1672.1|Name=mRNA_E-fasciculatus_F_contig1215.1672.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=351bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1215:19011..19361+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig1215:19011..19361+ >mRNA_E-fasciculatus_F_contig1215.1672.1 ID=mRNA_E-fasciculatus_F_contig1215.1672.1|Name=mRNA_E-fasciculatus_F_contig1215.1672.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=702bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1215:19011..19361+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |