mRNA_E-fasciculatus_F_contig1206.1606.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-fasciculatus_F_contig1206.1606.1
Unique NamemRNA_E-fasciculatus_F_contig1206.1606.1
TypemRNA
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Homology
BLAST of mRNA_E-fasciculatus_F_contig1206.1606.1 vs. uniprot
Match: A0A6H5J884_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5J884_9PHAE)

HSP 1 Score: 654 bits (1688), Expect = 4.620e-232
Identity = 345/395 (87.34%), Postives = 358/395 (90.63%), Query Frame = 1
Query:   64 MAGRRLGCALASNASALAACAVAVSAVQSSLTFLSCSSXXXXXXXXXXXXXXXXXXXXXXXXEPVNPCAEFNTLKWRMSYASRKDDCNAEDSCVFIGRSVTGACVPRDPSILHKRRSFPNVPLVLPDSDGSSKKLQAALQRQHTAKVMSETIDELESEYEHKGVEWYSDTTLAANKFRELMSALDVEESTQELALAILKEEGMHAVQVFVKSQLANAAAEELRYQKSATEAFAKDFLMEVMREPELPGQMGHMLESVFKDPALSTGIRHLIYNAVGLDYTYQSSLTLTIPLVRWLLSETDWMDAEAAKLCAYLVGLEQTELATIWLVAWAVREPGILDPSSSRGLAASLPLGSQQVTDAMVWALTETLKSDWALEMAKSTTVEMIKSRPNGTEKE 1248
            MAG RL C LASNASALA+C V  SAVQSSLT LSCS+                        EPVNPCAEFNTLKWRMSYA RK+DCN EDSCVF+GRSVTGACVPRDPSILHKRRSFPNVPLVLPDSDGS+KKLQAALQRQHTAKVMSETIDELESE+EHKGVE YSDT LAANKFRELMSALDVEESTQELALAIL+EEGMHAVQVFVKSQLANAAAEELRYQKSATEAFAKDFLMEV+REPELPGQMGHMLESVFKDPALSTGIRHLIYNAVGLDYTYQSSLTLTIPL+RWLLSETDWMDAEAAKLCAYLV LEQTELATI LVAWA+REPGILDPSSSRGLAASLPLGSQQ+TD+MVWALTETLKSDWALEMAKSTTVEMIKSRPNGT+KE
Sbjct:    1 MAGSRLCCTLASNASALASCTVVASAVQSSLTSLSCSNSEDGGSRRRGNNRRVRERSEEEA-EPVNPCAEFNTLKWRMSYAHRKNDCNGEDSCVFVGRSVTGACVPRDPSILHKRRSFPNVPLVLPDSDGSTKKLQAALQRQHTAKVMSETIDELESEFEHKGVEPYSDTKLAANKFRELMSALDVEESTQELALAILQEEGMHAVQVFVKSQLANAAAEELRYQKSATEAFAKDFLMEVIREPELPGQMGHMLESVFKDPALSTGIRHLIYNAVGLDYTYQSSLTLTIPLIRWLLSETDWMDAEAAKLCAYLVRLEQTELATILLVAWAIREPGILDPSSSRGLAASLPLGSQQITDSMVWALTETLKSDWALEMAKSTTVEMIKSRPNGTDKE 394          
BLAST of mRNA_E-fasciculatus_F_contig1206.1606.1 vs. uniprot
Match: A0A4D9D506_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D506_9STRA)

HSP 1 Score: 78.6 bits (192), Expect = 1.160e-11
Identity = 80/321 (24.92%), Postives = 141/321 (43.93%), Query Frame = 1
Query:  253 PVNPCAEFNTLKWR-MSYASRKDDCN-AEDSCVFIGRSVTGACVPRDPSILHKRRSFPNVPLVLPDSDGSSKKLQAALQRQHTAKVMSETIDELESEYEHKGVEWYSDTTLAANKFRELMSALDVEESTQELALAILKEEGMHA-VQVFVKSQLANAAAEELRYQKSATEAFAKDFLMEVMREPELPGQMGHMLESVFKDPALSTGIRHLIYNAVGLDYTYQSSLTLTIPLVRWLLSETDWMDAEAAKLCAYLVGLEQTELATIWLVAWAVREPGILDPSSSRGLAASL-PLGSQQVTDAMVWALTETLKSDWALEMAKST 1203
            P  PC ++N++  R +++ +R+  CN A  +CVF+GRS+TG CVP D + L++         V+P    S +                E  D  E+++               N     M    VE    +  + I+++EG+   V++ +   LA A  + LR  +S T+  AK+ +MEV+ +P     + H+L      P L+  +R L++  + L +T + S  L    + WL+      +     L   L+ L  T  A   L++W++   G L P  +   +  L PL +          + E L+ ++  E+AK T
Sbjct:  163 PPGPCDKYNSIASRFLTWQTRRRKCNLAPGNCVFMGRSLTGWCVPEDEAALYES--------VMPRQKWSEEXXXXXX----XXXXRGEIEDGGEADF------------FPPNDPEGPM----VETELLQSLVTIIRQEGIEQPVRLLITGSLAEAMTDSLRDGQSGTQELAKELVMEVLADPNSAAAVQHLLMR----PELAASLRGLVHPLLLLPFTKRESHRLLKQQLDWLMVRNPATERSLGGLGQLLLRLASTRAAIASLLSWSLSPSGPLPPLVTDLTSDRLVPLLAPATXXXXXXXVHEALEDEYIRELAKDT 451          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1206.1606.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5J884_9PHAE4.620e-23287.34Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A4D9D506_9STRA1.160e-1124.92Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig1206contigE-fasciculatus_F_contig1206:259..7224 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionexpressed unknown protein
Ec32 orthologEc-04_001310.1
Exons9
Model size1751
Cds size1224
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927714.413803-UTR-E-fasciculatus_F_contig1206:258..7581622927714.413803-UTR-E-fasciculatus_F_contig1206:258..758Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig1206 259..758 -
1695995662.9533343-UTR-E-fasciculatus_F_contig1206:258..7581695995662.9533343-UTR-E-fasciculatus_F_contig1206:258..758Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig1206 259..758 -
1622927714.5916784-UTR-E-fasciculatus_F_contig1206:7197..72241622927714.5916784-UTR-E-fasciculatus_F_contig1206:7197..7224Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig1206 7198..7224 -
1695995663.0594542-UTR-E-fasciculatus_F_contig1206:7197..72241695995663.0594542-UTR-E-fasciculatus_F_contig1206:7197..7224Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig1206 7198..7224 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927714.4291923-CDS-E-fasciculatus_F_contig1206:758..8661622927714.4291923-CDS-E-fasciculatus_F_contig1206:758..866Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1206 759..866 -
1695995662.9613175-CDS-E-fasciculatus_F_contig1206:758..8661695995662.9613175-CDS-E-fasciculatus_F_contig1206:758..866Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1206 759..866 -
1622927714.4436536-CDS-E-fasciculatus_F_contig1206:1211..13371622927714.4436536-CDS-E-fasciculatus_F_contig1206:1211..1337Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1206 1212..1337 -
1695995662.9784744-CDS-E-fasciculatus_F_contig1206:1211..13371695995662.9784744-CDS-E-fasciculatus_F_contig1206:1211..1337Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1206 1212..1337 -
1622927714.466514-CDS-E-fasciculatus_F_contig1206:1979..21561622927714.466514-CDS-E-fasciculatus_F_contig1206:1979..2156Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1206 1980..2156 -
1695995662.9901412-CDS-E-fasciculatus_F_contig1206:1979..21561695995662.9901412-CDS-E-fasciculatus_F_contig1206:1979..2156Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1206 1980..2156 -
1622927714.4835322-CDS-E-fasciculatus_F_contig1206:3202..32621622927714.4835322-CDS-E-fasciculatus_F_contig1206:3202..3262Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1206 3203..3262 -
1695995662.999747-CDS-E-fasciculatus_F_contig1206:3202..32621695995662.999747-CDS-E-fasciculatus_F_contig1206:3202..3262Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1206 3203..3262 -
1622927714.497375-CDS-E-fasciculatus_F_contig1206:3868..39641622927714.497375-CDS-E-fasciculatus_F_contig1206:3868..3964Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1206 3869..3964 -
1695995663.009345-CDS-E-fasciculatus_F_contig1206:3868..39641695995663.009345-CDS-E-fasciculatus_F_contig1206:3868..3964Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1206 3869..3964 -
1622927714.5153437-CDS-E-fasciculatus_F_contig1206:4274..44731622927714.5153437-CDS-E-fasciculatus_F_contig1206:4274..4473Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1206 4275..4473 -
1695995663.018988-CDS-E-fasciculatus_F_contig1206:4274..44731695995663.018988-CDS-E-fasciculatus_F_contig1206:4274..4473Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1206 4275..4473 -
1622927714.5338385-CDS-E-fasciculatus_F_contig1206:4824..49041622927714.5338385-CDS-E-fasciculatus_F_contig1206:4824..4904Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1206 4825..4904 -
1695995663.0283418-CDS-E-fasciculatus_F_contig1206:4824..49041695995663.0283418-CDS-E-fasciculatus_F_contig1206:4824..4904Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1206 4825..4904 -
1622927714.5628335-CDS-E-fasciculatus_F_contig1206:5574..56651622927714.5628335-CDS-E-fasciculatus_F_contig1206:5574..5665Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1206 5575..5665 -
1695995663.0378146-CDS-E-fasciculatus_F_contig1206:5574..56651695995663.0378146-CDS-E-fasciculatus_F_contig1206:5574..5665Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1206 5575..5665 -
1622927714.5799372-CDS-E-fasciculatus_F_contig1206:6910..71971622927714.5799372-CDS-E-fasciculatus_F_contig1206:6910..7197Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1206 6911..7197 -
1695995663.0492253-CDS-E-fasciculatus_F_contig1206:6910..71971695995663.0492253-CDS-E-fasciculatus_F_contig1206:6910..7197Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1206 6911..7197 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig1206.1606.1prot_E-fasciculatus_F_contig1206.1606.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalepolypeptideE-fasciculatus_F_contig1206 759..7197 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-fasciculatus_F_contig1206.1606.1

>prot_E-fasciculatus_F_contig1206.1606.1 ID=prot_E-fasciculatus_F_contig1206.1606.1|Name=mRNA_E-fasciculatus_F_contig1206.1606.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=408bp
MANPAHANDTTAMAGRRLGCALASNASALAACAVAVSAVQSSLTFLSCSS
SEDGGGNSRRGNNRRKRERSEEEEEPVNPCAEFNTLKWRMSYASRKDDCN
AEDSCVFIGRSVTGACVPRDPSILHKRRSFPNVPLVLPDSDGSSKKLQAA
LQRQHTAKVMSETIDELESEYEHKGVEWYSDTTLAANKFRELMSALDVEE
STQELALAILKEEGMHAVQVFVKSQLANAAAEELRYQKSATEAFAKDFLM
EVMREPELPGQMGHMLESVFKDPALSTGIRHLIYNAVGLDYTYQSSLTLT
IPLVRWLLSETDWMDAEAAKLCAYLVGLEQTELATIWLVAWAVREPGILD
PSSSRGLAASLPLGSQQVTDAMVWALTETLKSDWALEMAKSTTVEMIKSR
PNGTEKE*
back to top

mRNA from alignment at E-fasciculatus_F_contig1206:259..7224-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-fasciculatus_F_contig1206.1606.1 ID=mRNA_E-fasciculatus_F_contig1206.1606.1|Name=mRNA_E-fasciculatus_F_contig1206.1606.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=6966bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1206:259..7224- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
CTCCATCATCAACTTGCTGTGTTGTGCATGGCGAACCCCGCCCACGCTAA CGACACAACGGCGATGGCTGGTCGACGCTTGGGCTGCGCCCTGGCCTCAA ACGCGTCTGCACTGGCGGCCTGCGCCGTTGCGGTATCTGCGGTGCAAAGC AGTCTGACGTTCCTTAGCTGCTCAAGCAGCGAAGACGGCGGAGGCAACAG CAGGCGGGGCAATAACCGGCGAAAGCGAGAGAGGAGCGAAGAGGAGGAGG AACCCGTGAACCCGTGCGCCGAGTTCAACACGCTCAAGTGGAGGATGAGC TACGCTAGCCGCAAGTGAGAATCCGTGGCAATGAAACAGTGGTAGTATTG TGTCAACAAGGAAGCATTGCCGTATCTGCCCTGTGTTTCGTACGAGCCGA TGCATCCATCCAGGATTCAAACGACTATTTGTACAAGTAGTGTACGTTGC ACAAACGTTGTAGTCTAAACCCTACAGCAGTGTGTTAGGCCGCTGCCCCC CCCACGGGGGAGAGTTTCTCTAGCTGTTCTGGCTGCTGTTAGACCCGATG CCGTGCTAAGGTGCCGTCGATGCACATTACATTCACTGAATCAATCGAAA CGCCGATGCCGCCAGCTTGCGTGCATATCTTCGCCATATGATGCCGCATG CATCGGTTGCGTAAGATACAACACCCCCCTGGACCCAATTTCAAAAGCTT GATTGCTCTGCAGCAAAAACAGCTTCGTTGCCGAAAAATGGCGGCGTTAG AACGTTGCCGTCGAGAGCTGTCCGAAAATACCTCGTTTTGACTGCTATGG TACCCTCGTTATCGCGGAGTAAACTGCTGTCATTCGAGATTTAGCAATCG GTCACGGGGGGGTGGTATCTAACGCAACCTGCAGTAAGGAAATGCCTACC TGCACACAACACGGTACCCATGACAAACCAAGCCGTTGTTCTTGTCCAGT CAAGTTGACGATCCCACGATTTAGAGCACTAAGTTGACGATCCCACTGCA GTAGAGCACGTGGCAAAAACAGTTCCTTGTCCAGGTAAGTTGACGATCCA ATTAGAGAACTTTGCGTAGTTTGCGGTGACGCCGTAGGCGAGACAGAACG CCGGGATGGGAACGACGATAGGCAGCGCACCGGCCAAGTGTCTGGAACGG GAGTGAGCGTGCACCTGAAGACTACACGACACGCTGCCACTACAACAGTC TTGTACATTTTCCTTGTCGATGTCGGGTCGTGAGGACACTGCCGCAGGTG ACACAAGATACCACACCCCCTGGACCGATTTTCATGGCCTGACTACTCCA CGACGAAGAGGATGCCAAAATCAAATGATGTTTTTTTTTCGACAAGGCAG TTCCAGCGCCGCCATTTTGGCACTGCGGTGTACTCGAGCTTTGAAAATCG GTCCAGGGGGCGCGGTATCTCGTGTCACGTGCGGTTTACAGTGCGGGCTT TGATAGGCCGCTATACAGCAGTGGTCGGAAATCTGTTAGTACTGGTGCGT AATTTCTGTTGTCTTCACGGGAACTGTTGTGTGTCCGCCTCTCTCCTCGG GTGCGACAGGGATGATTGCAACGCTGAGGATTCTTGTGTTTTCATCGGGC GGAGCGTCACCGGCGCGTGCGTCCCCAGGGACCCGTCCATACTGCACAAG GTGTGAGGGTGTCCACGCGTGCCTTTTGTGTTGCTGTGTGCCAGGGAGTA GGTGTGCGCCCGTTTATACACGGACCACGTCGTGCCCCGGCGAATGCGTG CAAACGACGTTGGCGAGGTTTAGAAGCCGAATTAGACTAAAATGTAGTCA GCGCTGGCCAGTCTAGTGGTTTTTGACTTCGGCTCCCAAAGAGGACACAA CGAACGCTCTATTGTGCTGATTTCTGCTGCCATGCATCTTTCCCTTTGGC CTGGACGATTGAAGGCGCTAAGTGTCATAACTGCTGTGTCATGAGCCTCA AATCTAACCACTTAGATGCGCGCGTGAAGATGAGGCAACTTGCAAACTAC CCAAGACACATGTGAAGTCCGGACGCGTACTTCGTGAATGGCCTTCATCA TCAGACGTCCCCTGAGCCCTTGCCCAGTTCTGGTCTCCCGCGAGCTCTTC CGTTTGGTACACAACACCTTGAAGCTTTTGGTGTGATCGATTTTGGTAGA TTTGGTTCCTTTCCGGTCCTTGCGGTATTGTCTTTCCCACTTGCGACCCA ACGCTGATTGCCACGCATCGGTTTACCAGTCTCCCTTCCCCTCTTGTGTG TGGGAACATCACTGGACCCGACCGCTGCGGCCCGTCACGCGTGGATCAAA CGATCAACCAACGCCATCAGCGAAGGAGCTTCCCGAACGTTCCCCTGGTT TTGCCGGATAGCGACGGTTCTTCGAAAAAACTCCAAGCCGCTCTTCAAAG GTGAATGAGCGATAGGACTGACTTGTGACGTCGCCTTTTGCTGTGCGTGT CGAACATGATTAGCGTTGTTCAGGACTCAGCTTCGTTCTGCTAGAAAATG TCTGCTCCAGTCGGTACGTTGGTACTTGATGCTCCACTCTGTTGCGTCTC CTACGCTACTGTCTACCATTACTGTTTTTTTTTAGCCGGACCTTGGCGGT GGTATTACTGCCATGGAGCATGCTCGGCTACGTATGTTTCCCGTCTTGGG CGCCATTCCGAACCAAGTCCCAGGAGTTTGCCTTTGCGGGAAATGTCGGC CGTGTGTACAGCCGAGCGATTCTGTCCGTTGCGCTTAACGGCAATCCCCA GGCAACACACGGCGAAGGTTATGAGCGAGACCATAGACGAGCTCGAGTCG GAGTACGAACACAAAGGCGTGGAATGGTACTCCGACACGACGCTGGCGGC GAACAAGTTCCGAGAGCTCATGTCCGCGCTGGACGTGGAGGAGAGCACGC AGGAGCTGGCCCTGGCGATACTGAAGGAGGAAGGAATGCACGCTGTGCAG GTGAAAGTTCCACGTTCGCGCGTGCCTCTTTTTGTTGTTTTTCGTATAAA ATTGCTGGTTGTCGGTCCGTTCACCTTTCGGCACAATTCTGGACGCACTA GCCGGGGCCACGCATGAGAACGGCCTCATAGGGGTCACACTTTGCGCGTT GTCGTTGCATATCATCTACCCATGCAAATAGTGGGCGCTAGAATATCGAT TATTTTGTGTGTGCTTAGCAAGTGGTGCTACAGCGTGTGATCAGCAGCTT GCACGATTCATCATAAACGTTTTATCAACGTTCCCATCGTACAATCCCCC CTTTCTCCAGGTTTTCGTGAAGAGTCAGTTGGCCAACGCTGCCGCCGAAG AGCTGCGATATCAAAAGTCCGCGACGGAAGCATTCGCCAAAGATTTTCTC ATGGAGGTGTGTCTGTGGGCGGGGCGATATCTGGGGATGGCACAACTTTT CCACGGCATTTTTCTTCAACTTGTAGTACCTTGCAACAACAGTTTATGTC GACGCGGTGTTGTCGTGCCGGTCATCGCCGATCACACCCGGGTGAAAATC CCCTAGTGTTTTCTTGCTCTAGCGTCGGCGCCATTCGATAACCTAGTCAT GTGCGAGACTGGGACAGTACTTGCGGAGTAGGTGGTGGACTTACGAAAGA AACGCCGTGTTTTTGGTACCAGACCCTCCGCGCAGGCTTGCGATGCTGGG CGATGTATGACCCGGCACAGGCCCTGCTGTATTGCTCGTGTTTCTTGACT TCGAAGAAGGGGACCTCCCATCGTAGCCATCGACGCCCATGCAATCTATG CCCCGCTCACGGTAGTCGCCGGTAACACGCCACTATTAGCAGCCATAATG CCTTCTTCATGCTCAACATCATCTTTTCCCGTAGCCTCCGCTTTTCGAGA AGGCCATGGAGTCGACGGCATTTCTTGAGTGCCAACTGCTGTAGAGCCCG GTGCTTTTTTCGATCGCCAAGACCTTTTATACTCCCTGTTCTTTCGCTCT CGTCGGTTTTAGGTGATGCGCGAGCCGGAGCTGCCGGGGCAGATGGGGCA CATGCTCGAGTCTGTTTTCAAGGTCAGGCTTCCCCCACCAGAGCTGATTT TCCCTTTTCCAGGAATCCGGTACAACCTACCTGAGACCTTTCACCTTCAG TCTCCTCTTCGTATCTGAAAACCTGTGTATGATGGTGTTTTTGTTCTGTG GGTCCCGCGTAGCGTCTCAAGTATGGCCGCCCTGCGTGTTGTACCCGACG CTGCAGAAACTGCCGGTTCGTGAGTGCCGGAAATGACTGTTAATTGCCTT CTCTCGCAGTCTTGTTGAAAGCACTTGTATCAGTGAGATGGATTTTCTCT GTGACCCAGCATCCGACCTCTTGCGTTGGACAGGGAAGGCCTCACAGTAG CCAAATCTATCATAACGAGTGGAAGTAAACGAAATGACTGAGGGGAAGGC TAGTTGAAGTGCATCGTCTGGGTCCACACGGGGCGTGTTCTAGCGTTAGA CCACCTCACGCGCACTCCTCCACGACAATAAATGTAACTGTGGTTTGGCG GACCTGCAGTTCTCTTGGATTTGGCGTCACAGTCAGATCGGTTCAGTAAT GCCGGTGAAGTAGTCCCGGTGCAGCTGTAGTGCTAGGTAATCATATGGCA CAGAGACTGCCATCAAGTCGTCATGTGCTCCGTCTGAATGGTGCCTTGTA GTGCGAATAAAATCGTGTGACACAGAGAGAAAGCCATCAAGTCGGTTTGT ACGCTGAATCGTCTGAATGCTGAGAGACACAGGTCTGTTGGTTGTGCACA TACCGGCTTTAGTGACAGCCAGCGCTCGACGATAGGCACCTGCCGTAGGA TGCTGGCGGAACGGTGAACACTGTGGCACACACCGCATGCCATCCGAAAA AGGGACGCCTCCGTTAACATCGCTTATGCCCTTCCTGTCCCCCGGCGACA CCGTTCCCGAGCACCATCTCCGATGTCATCGACTCCGATGAGGACTTCTG TGGTGCTGTTCCTGCTGCATCTTGACGCTCATGCTCTTGCGTTTTGCTGC TGTCGCAATGCCGCTGTTCGTACGTGTGCCCGCGCTGCTTCTGCTACCTG CTGCTCCTTGTGCTGCAGGACCCGGCGCTTTCCACCGGCATCCGGCATCT CATCTACAACGCCGTAGGGTTGGACTACACGTACCAGTCGTCCTTGACGC TGACGATACCCTTGGTAAGGTGGCTCTTGTCGGAGACAGACTGGATGGAT GCGGAGGCCGCCAAGCTTTGCGCTTACCTCGTCGGGCTAGAGCAGGTGAA CCATCATGGAAGTGCGGCAAACGTGTAGGCTTGTTCGTTAGTTGTGAAGT GCTGGCGGCATCTGTGACAACAGTGCATACGACGGCGGTGGAATTGCTTG TTGCTCTTGTCCGGATAATGTCCCGATAATTCCAGTGAAATGGGAATCAA TGTACTCCAATCGTTGGGCTAGGTCTCAGAGAGTACGAGCCATTGCGATT GTCCCGACACCAATAAGTCACGCGTACAAACAAACCGTATCCATTTTACT CTGTTTCATGAACTATGCAACGGACATGAAAATTTTTGGACGGCTAGGTT TGGTCTGCTTCATGAGTTCATGAAGCCAAGAGCAATACTCTTATTTTGCG CCCTTCCCAGATAAACGCGAAAGAGTGCAGTGATTTTTGTAGTGGACAGG GAAATCAAGTCCTCGTCAGCGGTTACCCTTCGCTCGTGCTGTCTCTTACT GAGAACTACTGCCGAGATGACCGAAGCAAACCGGAATTTACCTGTCCTTC GTGCGCGTGTCAAGCGTAGATTTCAACGACGTTGAAGAACGATGTACACG GTCTGTGCCGATTGAAAATACCCTTCTGTCCGATCCTTTGTCTGCATTCA TGGCGCTCATGATTTGCGCGGCGTCGCCGTATTTCAGACCGAGTTGGCGA CGATCTGGCTGGTGGCATGGGCTGTTCGAGAGCCAGGGATCCTAGACCCG TCATCGTCAAGGGGCTTGGCAGCTAGCCTGCCGTTGGGGTCTCAACAAGT AACGGACGCTATGGTAAGTTGCTGCATTTCTACCTGGGGTTAACGGTCGT CGGCAAAGCGCGCGACGGCCCCTGACACGCAGGGATAAGTCCATTATGGA GGCTTGTGCTTACACACCACAACTTGAGTGCATACTCTGTGTACACAGTA CTCGGTATTCACCCTGCACCGAATTATGTCAAGTGTGGGTGTGCAGACGG AGGAAACCTCACGCACACGCCTCGCGTTGAAGAAGGAAAGCGTGTGGCTG CTGTTGTTTTCGTCCCCATTGATTATGGCGCCAGTCAACTACACCTTTGG GCGCATCATTGCATGAGAACAGCGCTTTATGACACGGTTAAACGCTGCTG GCACACAGGTGTGGGCATTGACCGAAACGCTGAAGTCCGACTGGGCGCTT GAGATGGCCAAATCTACGACCGTGGAGATGATCAAGTCCAGGCCAAACGG GACGGAAAAGGAGTAGATCCAGATAGTGCCCGCACCTAGGAACCCCTAGT TTTGGCCGAGCCTCGGGTACTTAAGTCTGCCTGTTATATAGGGATTAGCG TATGTGCCTGTGACTTCGTAGGTGGAATGATAAGCACGAAGTTCGTAACT GCCAACTACTTTTATGTGCAGACGCTATCCGTGCTCTTCAAAACTGGGCG AGGGTGGTACCACTGACACCAGCACGTGTAGGCCGACGAGAGGACGGGGC ATGGGGCATGGTGGGGAGAGGGGCGTACAGCCGAAGCAAGCGGAAAGCGG AGATGAAGGTCATGTGCATTGCAGTTCTAAGGATTCAGCTTGGATAGTAC TGTAGATAGATAGGTTCGTCGGGGTGCAGTTAGCCCCGACGATAGAAACT TCTTTAAGAAACGAAGGCTCAAATTTCCACGGAAATTGAGAAAGTGGGGA ACATGTAGCTCGATCTGGGCCACAATATAAGGAACGTCCCAACAAGAAGA CAGGCGCGAAAACTAC
back to top

Coding sequence (CDS) from alignment at E-fasciculatus_F_contig1206:259..7224-

>mRNA_E-fasciculatus_F_contig1206.1606.1 ID=mRNA_E-fasciculatus_F_contig1206.1606.1|Name=mRNA_E-fasciculatus_F_contig1206.1606.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=2448bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1206:259..7224- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
ATGGCGAACCCCGCCCACGCTAACGACACAACGGCGATGGCTGGTCGACG
CTTGGGCTGCGCCCTGGCCTCAAACGCGTCTGCACTGGCGGCCTGCGCCG
TTGCGGTATCTGCGGTGCAAAGCAGTCTGACGTTCCTTAGCTGCTCAAGC
AGCGAAGACGGCGGAGGCAACAGCAGGCGGGGCAATAACCGGCGAAAGCG
AGAGAGGAGCGAAGAGGAGGAGGAACCCGTGAACCCGTGCGCCGAGTTCA
ACACGCTCAAGTGGAGGATGAGCTACGCTAGCCGCAAATGGCGAACCCCG
CCCACGCTAACGACACAACGGCGATGGCTGGTCGACGCTTGGGCTGCGCC
CTGGCCTCAAACGCGTCTGCACTGGCGGCCTGCGCCGTTGCGGTATCTGC
GGTGCAAAGCAGTCTGACGTTCCTTAGCTGCTCAAGCAGCGAAGACGGCG
GAGGCAACAGCAGGCGGGGCAATAACCGGCGAAAGCGAGAGAGGAGCGAA
GAGGAGGAGGAACCCGTGAACCCGTGCGCCGAGTTCAACACGCTCAAGTG
GAGGATGAGCTACGCTAGCCGCAAGGATGATTGCAACGCTGAGGATTCTT
GTGTTTTCATCGGGCGGAGCGTCACCGGCGCGTGCGTCCCCAGGGACCCG
TCCATACTGCACAAGGGATGATTGCAACGCTGAGGATTCTTGTGTTTTCA
TCGGGCGGAGCGTCACCGGCGCGTGCGTCCCCAGGGACCCGTCCATACTG
CACAAGCGAAGGAGCTTCCCGAACGTTCCCCTGGTTTTGCCGGATAGCGA
CGGTTCTTCGAAAAAACTCCAAGCCGCTCTTCAAAGCGAAGGAGCTTCCC
GAACGTTCCCCTGGTTTTGCCGGATAGCGACGGTTCTTCGAAAAAACTCC
AAGCCGCTCTTCAAAGGCAACACACGGCGAAGGTTATGAGCGAGACCATA
GACGAGCTCGAGTCGGAGTACGAACACAAAGGCGTGGAATGGTACTCCGA
CACGACGCTGGCGGCGAACAAGTTCCGAGAGCTCATGTCCGCGCTGGACG
TGGAGGAGAGCACGCAGGAGCTGGCCCTGGCGATACTGAAGGAGGAAGGA
ATGCACGCTGTGCAGGCAACACACGGCGAAGGTTATGAGCGAGACCATAG
ACGAGCTCGAGTCGGAGTACGAACACAAAGGCGTGGAATGGTACTCCGAC
ACGACGCTGGCGGCGAACAAGTTCCGAGAGCTCATGTCCGCGCTGGACGT
GGAGGAGAGCACGCAGGAGCTGGCCCTGGCGATACTGAAGGAGGAAGGAA
TGCACGCTGTGCAGGTTTTCGTGAAGAGTCAGTTGGCCAACGCTGCCGCC
GAAGAGCTGCGATATCAAAAGTCCGCGACGGAAGCATTCGCCAAAGATTT
TCTCATGGAGGTTTTCGTGAAGAGTCAGTTGGCCAACGCTGCCGCCGAAG
AGCTGCGATATCAAAAGTCCGCGACGGAAGCATTCGCCAAAGATTTTCTC
ATGGAGGTGATGCGCGAGCCGGAGCTGCCGGGGCAGATGGGGCACATGCT
CGAGTCTGTTTTCAAGGTGATGCGCGAGCCGGAGCTGCCGGGGCAGATGG
GGCACATGCTCGAGTCTGTTTTCAAGGACCCGGCGCTTTCCACCGGCATC
CGGCATCTCATCTACAACGCCGTAGGGTTGGACTACACGTACCAGTCGTC
CTTGACGCTGACGATACCCTTGGTAAGGTGGCTCTTGTCGGAGACAGACT
GGATGGATGCGGAGGCCGCCAAGCTTTGCGCTTACCTCGTCGGGCTAGAG
CAGGACCCGGCGCTTTCCACCGGCATCCGGCATCTCATCTACAACGCCGT
AGGGTTGGACTACACGTACCAGTCGTCCTTGACGCTGACGATACCCTTGG
TAAGGTGGCTCTTGTCGGAGACAGACTGGATGGATGCGGAGGCCGCCAAG
CTTTGCGCTTACCTCGTCGGGCTAGAGCAGACCGAGTTGGCGACGATCTG
GCTGGTGGCATGGGCTGTTCGAGAGCCAGGGATCCTAGACCCGTCATCGT
CAAGGGGCTTGGCAGCTAGCCTGCCGTTGGGGTCTCAACAAGTAACGGAC
GCTATGACCGAGTTGGCGACGATCTGGCTGGTGGCATGGGCTGTTCGAGA
GCCAGGGATCCTAGACCCGTCATCGTCAAGGGGCTTGGCAGCTAGCCTGC
CGTTGGGGTCTCAACAAGTAACGGACGCTATGGTGTGGGCATTGACCGAA
ACGCTGAAGTCCGACTGGGCGCTTGAGATGGCCAAATCTACGACCGTGGA
GATGATCAAGTCCAGGCCAAACGGGACGGAAAAGGAGTAGGTGTGGGCAT
TGACCGAAACGCTGAAGTCCGACTGGGCGCTTGAGATGGCCAAATCTACG
ACCGTGGAGATGATCAAGTCCAGGCCAAACGGGACGGAAAAGGAGTAG
back to top