prot_E-fasciculatus_F_contig12040.1589.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig12040.1589.1
Unique Nameprot_E-fasciculatus_F_contig12040.1589.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length293
Homology
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BLAST of mRNA_E-fasciculatus_F_contig12040.1589.1 vs. uniprot
Match: A0A6H5L0A8_9PHAE (PAP_fibrillin domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0A8_9PHAE)

HSP 1 Score: 382 bits (982), Expect = 1.110e-128
Identity = 246/294 (83.67%), Postives = 258/294 (87.76%), Query Frame = 0 
Query:    1 ANTNESLLRLGTLVEKIDEKYFSKYVAAGSSLSYKDTLAAA-TTTDRKTGAGAASSKGGKVDKMTKEAEGLASTASSDVSKAADXXXXXXXXXXXXXXXXXXXXXXXXXXXVAESASSKEKGSSGTVKLDRPKEVQGVFDDIQKKAVEFYKTSPAAKSSSQGAEGGAAAPLSEAAKGLETKLESLLNESKFKPRKLKKDKKSQLVDAIKAMEESYPADANPLADPALSGQWSVVYSSSSRLLGRVIKGLLSGFFKTSDPRQVVDTGASSVLNACRARLRLTPLALRVAKKGSYR 293
            ANTNESLL+LGTLVE IDE+YFSKYVA G++ +YKDTLAAA TTT   TG G + SKGGK DKMT+EAEGLASTASSD SKA  XXXXXXXXXXXXXXXXXXXXXX     VAE      +GSSGTVKLDRPKEVQGVFDD+QKKAV+FYKTS  A S SQ AEGGA AP+SEAAK LETKLESLL+ES FKPRKLKKDKKSQLVDAIKAMEESYPA ANPLADPALSGQWSVVYSSSSRLLGRVIKGL SGFFKTSD RQVVDTGASSVLNACRARLRLTPLALRVAKKGSYR
Sbjct:  107 ANTNESLLKLGTLVENIDERYFSKYVAVGATPAYKDTLAAAATTTSGATGTGVSMSKGGKPDKMTEEAEGLASTASSDASKAXXXXXXXXXXXXXXXXXXXXXXXXDAKAAVAE------EGSSGTVKLDRPKEVQGVFDDVQKKAVDFYKTSSGAMSKSQDAEGGAVAPMSEAAKTLETKLESLLSESNFKPRKLKKDKKSQLVDAIKAMEESYPAGANPLADPALSGQWSVVYSSSSRLLGRVIKGLFSGFFKTSDRRQVVDTGASSVLNACRARLRLTPLALRVAKKGSYR 394
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BLAST of mRNA_E-fasciculatus_F_contig12040.1589.1 vs. uniprot
Match: D8LNG8_ECTSI (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNG8_ECTSI)

HSP 1 Score: 286 bits (733), Expect = 1.050e-92
Identity = 203/248 (81.85%), Postives = 213/248 (85.89%), Query Frame = 0 
Query:    1 ANTNESLLRLGTLVEKIDEKYFSKYVAAGSSLSYKDTLAAATTTDRKTGAG----AASSKGGKVDKMTKEAEGLASTASSDVSKAADXXXXXXXXXXXXXXXXXXXXXXXXXXXVAESASSKEKGSSGTVKLDRPKEVQGVFDDIQKKAVEFYKTSPAAKSSSQGAEGGAAAPLSEAAKGLETKLESLLNESKFKPRKLKKDKKSQLVDAIKAMEESYPADANPLADPALSGQWSVVYSSSSRLLGRV 244
            ANTNESLL+LGTLVEKIDE+YFSKYV AG++ SYKDTLAAA               A+SKGGK+DKMTKEAEGLAST SSDVSKA  XXXXXXXXXXXXXXXXXXXXXXXXXXX AE     E+GSSGTVKLDRPKEVQGVFDDIQKKAVEFYKTS  A S SQ AEGGAAAP+SEAAK LETKLESLL+ES FKPRKLKKDKKSQLV AIKAMEESYPADANPLADPALSGQWSVVYSSSSR LGR+
Sbjct:   74 ANTNESLLKLGTLVEKIDERYFSKYVTAGANPSYKDTLAAAAXXXXXXXXXXXXXVAASKGGKLDKMTKEAEGLASTVSSDVSKAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAE-----EEGSSGTVKLDRPKEVQGVFDDIQKKAVEFYKTSSGAMSKSQDAEGGAAAPMSEAAKTLETKLESLLSESNFKPRKLKKDKKSQLVAAIKAMEESYPADANPLADPALSGQWSVVYSSSSRGLGRL 316
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig12040.1589.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5L0A8_9PHAE1.110e-12883.67PAP_fibrillin domain-containing protein n=1 Tax=Ec... [more]
D8LNG8_ECTSI1.050e-9281.85Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006843Plastid lipid-associated protein/fibrillin conserved domainPFAMPF04755PAP_fibrillincoord: 193..274
e-value: 4.7E-6
score: 26.7

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig12040contigE-fasciculatus_F_contig12040:835..4131 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig12040.1589.1mRNA_E-fasciculatus_F_contig12040.1589.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig12040 835..4131 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig12040.1589.1 ID=prot_E-fasciculatus_F_contig12040.1589.1|Name=mRNA_E-fasciculatus_F_contig12040.1589.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=293bp
ANTNESLLRLGTLVEKIDEKYFSKYVAAGSSLSYKDTLAAATTTDRKTGA
GAASSKGGKVDKMTKEAEGLASTASSDVSKAADAVSKSVSASAGAAVETV
DKAAGDAKAAVAESASSKEKGSSGTVKLDRPKEVQGVFDDIQKKAVEFYK
TSPAAKSSSQGAEGGAAAPLSEAAKGLETKLESLLNESKFKPRKLKKDKK
SQLVDAIKAMEESYPADANPLADPALSGQWSVVYSSSSRLLGRVIKGLLS
GFFKTSDPRQVVDTGASSVLNACRARLRLTPLALRVAKKGSYR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006843PAP/fibrillin_dom