mRNA_E-fasciculatus_F_contig12035.1586.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig12035.1586.1 vs. uniprot
Match: D8LF91_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LF91_ECTSI) HSP 1 Score: 151 bits (382), Expect = 8.540e-41 Identity = 73/77 (94.81%), Postives = 77/77 (100.00%), Query Frame = 1
Query: 22 VQVKSGDYTIYVHIIEARDLKAEDVQGTSDPVVYVEAFGQKYATEVKEACLSCVFDETFVIGLRNLDKDEFEEGVIR 252
++VKSGDYTIYVHIIEARDLKAED+QGTSDPVVYVEAFGQK+ATEVKEACLSCVFDETFVIGLRNLDKDEFEEGVIR
Sbjct: 365 IEVKSGDYTIYVHIIEARDLKAEDLQGTSDPVVYVEAFGQKFATEVKEACLSCVFDETFVIGLRNLDKDEFEEGVIR 441
BLAST of mRNA_E-fasciculatus_F_contig12035.1586.1 vs. uniprot
Match: A0A6H5JL55_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JL55_9PHAE) HSP 1 Score: 150 bits (380), Expect = 1.590e-40 Identity = 73/77 (94.81%), Postives = 76/77 (98.70%), Query Frame = 1
Query: 22 VQVKSGDYTIYVHIIEARDLKAEDVQGTSDPVVYVEAFGQKYATEVKEACLSCVFDETFVIGLRNLDKDEFEEGVIR 252
++VKSGDYTIYVHIIEARDLKAED+QGTSDPVVYVEAFGQKYATEVK ACLSCVFDETFVIGLRNLDKDEFEEGVIR
Sbjct: 422 IEVKSGDYTIYVHIIEARDLKAEDLQGTSDPVVYVEAFGQKYATEVKAACLSCVFDETFVIGLRNLDKDEFEEGVIR 498
BLAST of mRNA_E-fasciculatus_F_contig12035.1586.1 vs. uniprot
Match: D8LF87_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LF87_ECTSI) HSP 1 Score: 115 bits (287), Expect = 5.680e-28 Identity = 56/76 (73.68%), Postives = 65/76 (85.53%), Query Frame = 1
Query: 25 QVKSGDYTIYVHIIEARDLKAEDVQGTSDPVVYVEAFGQKYATEVKEACLSCVFDETFVIGLRNLDKDEFEEGVIR 252
+V SGDY YVHIIE R+LK ED+QGTSDPVVYVEAFGQK+ATEV + L+ VFDETFVI LRNLD+D+F+EGV R
Sbjct: 663 KVISGDYVAYVHIIEVRELKGEDLQGTSDPVVYVEAFGQKFATEVVKDRLNAVFDETFVINLRNLDQDDFKEGVFR 738
BLAST of mRNA_E-fasciculatus_F_contig12035.1586.1 vs. uniprot
Match: A0A6H5L7Z1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7Z1_9PHAE) HSP 1 Score: 114 bits (286), Expect = 7.680e-28 Identity = 55/76 (72.37%), Postives = 65/76 (85.53%), Query Frame = 1
Query: 25 QVKSGDYTIYVHIIEARDLKAEDVQGTSDPVVYVEAFGQKYATEVKEACLSCVFDETFVIGLRNLDKDEFEEGVIR 252
+V SGDY YVHIIE R+LK ED+QGTSDPVVYVEAFGQK+ATEV + L+ VFDETFVI LRN+D+D+F+EGV R
Sbjct: 733 KVVSGDYVAYVHIIEVRELKGEDLQGTSDPVVYVEAFGQKFATEVVKDRLNAVFDETFVINLRNMDQDDFKEGVFR 808
BLAST of mRNA_E-fasciculatus_F_contig12035.1586.1 vs. uniprot
Match: A0A812YP87_SYMMI (Myof protein (Fragment) n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812YP87_SYMMI) HSP 1 Score: 98.2 bits (243), Expect = 8.860e-23 Identity = 43/77 (55.84%), Postives = 60/77 (77.92%), Query Frame = 1
Query: 22 VQVKSGDYTIYVHIIEARDLKAEDVQGTSDPVVYVEAFGQKYATEVKEACLSCVFDETFVIGLRNLDKDEFEEGVIR 252
+++KSGDY + V+I+EAR+LK +D+ G SDPVV + AFG+K ++ V+ A L+CVFDE F+ RN+DKD F EGVIR
Sbjct: 94 IEIKSGDYQVQVNILEARELKGKDMNGLSDPVVTIHAFGEKQSSSVQRASLNCVFDELFIFNFRNMDKDVFSEGVIR 170
BLAST of mRNA_E-fasciculatus_F_contig12035.1586.1 vs. uniprot
Match: A0A7S1XRY6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XRY6_9STRA) HSP 1 Score: 98.6 bits (244), Expect = 1.440e-22 Identity = 48/76 (63.16%), Postives = 58/76 (76.32%), Query Frame = 1
Query: 22 VQVKSGDYTIYVHIIEARDLKAEDVQGTSDPVVYVEAFGQKYATEVKEACLSCVFDETFVIGLRNLDKDEFEEGVI 249
V++KSGDY VHIIE RDLK ED++GTSDPVVYVE G+K AT V + VFDE F+I LRN+DK++FEE VI
Sbjct: 3 VEIKSGDYQFQVHIIECRDLKGEDLEGTSDPVVYVEVLGKKVATSVISKQNNPVFDERFIINLRNVDKEDFEEAVI 78
BLAST of mRNA_E-fasciculatus_F_contig12035.1586.1 vs. uniprot
Match: A0A7S3HPR4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HPR4_9STRA) HSP 1 Score: 98.2 bits (243), Expect = 4.850e-22 Identity = 43/77 (55.84%), Postives = 60/77 (77.92%), Query Frame = 1
Query: 22 VQVKSGDYTIYVHIIEARDLKAEDVQGTSDPVVYVEAFGQKYATEVKEACLSCVFDETFVIGLRNLDKDEFEEGVIR 252
+++K GDY + VHIIEAR+LKAE++ GTSDPVVYVE FGQK T ++ SCV+DE F+ ++NLDK+ F +G++R
Sbjct: 406 IEIKDGDYQVQVHIIEARELKAENLDGTSDPVVYVECFGQKQNTICVKSVTSCVYDELFIFNMKNLDKETFADGLLR 482
BLAST of mRNA_E-fasciculatus_F_contig12035.1586.1 vs. uniprot
Match: A0A7S2D049_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2D049_9STRA) HSP 1 Score: 95.1 bits (235), Expect = 6.010e-21 Identity = 42/77 (54.55%), Postives = 60/77 (77.92%), Query Frame = 1
Query: 22 VQVKSGDYTIYVHIIEARDLKAEDVQGTSDPVVYVEAFGQKYATEVKEACLSCVFDETFVIGLRNLDKDEFEEGVIR 252
+++KSGDY + VHIIE R+LK +D++GTSDPVV +EAFG+K +T V + C + V+DE F+ RN+DK EFEE +I+
Sbjct: 230 IEIKSGDYQVQVHIIECRELKGKDLEGTSDPVVTIEAFGEKQSTAVMDKCANPVYDELFIFNKRNIDKLEFEEELIK 306
BLAST of mRNA_E-fasciculatus_F_contig12035.1586.1 vs. uniprot
Match: A0A7S3JSY6_9STRA (Hypothetical protein n=2 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JSY6_9STRA) HSP 1 Score: 95.1 bits (235), Expect = 6.020e-21 Identity = 45/77 (58.44%), Postives = 57/77 (74.03%), Query Frame = 1
Query: 22 VQVKSGDYTIYVHIIEARDLKAEDVQGTSDPVVYVEAFGQKYATEVKEACLSCVFDETFVIGLRNLDKDEFEEGVIR 252
++VKSGDY + V IIEAR+LK ++ GTSDPV +E FG+K + V CLSCVFDETF+I RNLDKD F+E I+
Sbjct: 389 IEVKSGDYQVIVDIIEARELKPKNWSGTSDPVCVIECFGEKRTSSVHNDCLSCVFDETFIINKRNLDKDIFKESSIK 465
BLAST of mRNA_E-fasciculatus_F_contig12035.1586.1 vs. uniprot
Match: A0A5D6XHY7_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XHY7_9STRA) HSP 1 Score: 94.7 bits (234), Expect = 8.200e-21 Identity = 43/77 (55.84%), Postives = 57/77 (74.03%), Query Frame = 1
Query: 22 VQVKSGDYTIYVHIIEARDLKAEDVQGTSDPVVYVEAFGQKYATEVKEACLSCVFDETFVIGLRNLDKDEFEEGVIR 252
+++KSGDYTI VH+IEARDL +D GTSDPVVYVE G+K T VK+ L+CV+D+ + LRN+DK E E G ++
Sbjct: 388 IEIKSGDYTIQVHVIEARDLVPKDATGTSDPVVYVEVLGEKQQTAVKKQMLNCVWDDLLIFPLRNIDKAEIEMGYVK 464 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig12035.1586.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig12035.1586.1 >prot_E-fasciculatus_F_contig12035.1586.1 ID=prot_E-fasciculatus_F_contig12035.1586.1|Name=mRNA_E-fasciculatus_F_contig12035.1586.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=84bp MPVVVVVVQVKSGDYTIYVHIIEARDLKAEDVQGTSDPVVYVEAFGQKYAback to top mRNA from alignment at E-fasciculatus_F_contig12035:837..1545- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig12035.1586.1 ID=mRNA_E-fasciculatus_F_contig12035.1586.1|Name=mRNA_E-fasciculatus_F_contig12035.1586.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=709bp|location=Sequence derived from alignment at E-fasciculatus_F_contig12035:837..1545- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig12035:837..1545- >mRNA_E-fasciculatus_F_contig12035.1586.1 ID=mRNA_E-fasciculatus_F_contig12035.1586.1|Name=mRNA_E-fasciculatus_F_contig12035.1586.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=504bp|location=Sequence derived from alignment at E-fasciculatus_F_contig12035:837..1545- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |