prot_E-fasciculatus_F_contig11996.1550.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig11996.1550.1
Unique Nameprot_E-fasciculatus_F_contig11996.1550.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length128
Homology
BLAST of mRNA_E-fasciculatus_F_contig11996.1550.1 vs. uniprot
Match: D8LRT3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRT3_ECTSI)

HSP 1 Score: 241 bits (615), Expect = 5.480e-78
Identity = 120/134 (89.55%), Postives = 120/134 (89.55%), Query Frame = 0
Query:    1 SPDGTCLLTSSDDTVLRVFE---------KRQAPSVTVDDAASSAHSHFTDDWSPCLYSVEGETVYDFAWYPHMSSSEPATSVFVSTSRDHPLHMWDAFTGNLRATYRAYDHLDEVVAANSVCFNTAGDKIFAG 125
            SPDGTCLLTSSDDTVLRVFE         KRQAPS TVDDAASSAH   TDDWSPCLYSVEGETVYDFAWYPHMSSSEPATSVFVSTSRDHPLHMWDAFTGNLRATYRAYDHLDEVVAANSVCFNTAG KIFAG
Sbjct:   69 SPDGTCLLTSSDDTVLRVFEVPGHALRGEKRQAPSDTVDDAASSAHFDITDDWSPCLYSVEGETVYDFAWYPHMSSSEPATSVFVSTSRDHPLHMWDAFTGNLRATYRAYDHLDEVVAANSVCFNTAGGKIFAG 202          
BLAST of mRNA_E-fasciculatus_F_contig11996.1550.1 vs. uniprot
Match: UPI00192EEB6A (telomerase Cajal body protein 1-like n=1 Tax=Eucalyptus grandis TaxID=71139 RepID=UPI00192EEB6A)

HSP 1 Score: 146 bits (368), Expect = 1.650e-41
Identity = 71/126 (56.35%), Postives = 94/126 (74.60%), Query Frame = 0
Query:    1 SPDGTCLLTSSDDTVLRVFEKRQAPSVTVDDAASSAHSHFTDD-WSPCLYSVEGETVYDFAWYPHMSSSEPATSVFVSTSRDHPLHMWDAFTGNLRATYRAYDHLDEVVAANSVCFNTAGDKIFAG 125
            SPDGTCLL+SS+D  LRVF     P    DD+A+++ S+  +D ++  L   EGE+VYDF WYP+MS+++P + VF ST+RDHP+H+WDA TG LR TYRAYD +DE+ AA S+ FN AG+KIFAG
Sbjct:   67 SPDGTCLLSSSEDNTLRVFA---LPEYGGDDSANASSSNLDEDSFAANLVVTEGESVYDFCWYPYMSATDPVSCVFASTTRDHPIHVWDATTGQLRCTYRAYDGVDEITAAFSIAFNPAGNKIFAG 189          
BLAST of mRNA_E-fasciculatus_F_contig11996.1550.1 vs. uniprot
Match: A0A8K1FL14_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FL14_PYTOL)

HSP 1 Score: 148 bits (373), Expect = 2.360e-40
Identity = 70/125 (56.00%), Postives = 88/125 (70.40%), Query Frame = 0
Query:    1 SPDGTCLLTSSDDTVLRVFEKRQAPSVTVDDAASSAHSHFTDDWSPCLYSVEGETVYDFAWYPHMSSSEPATSVFVSTSRDHPLHMWDAFTGNLRATYRAYDHLDEVVAANSVCFNTAGDKIFAG 125
            SPDG C+LTSS+D +LR+FE     +  V+  +              L + EG  VYD+AWYP+M+S +PAT +F+STSRDHP+HMWDA+TG LRATYRA+DHLDE+ AA SV FN  GDKIFAG
Sbjct:   85 SPDGLCMLTSSEDHILRIFELPSEENADVEQLS-------------ILQAKEGGAVYDYAWYPYMTSQDPATCIFISTSRDHPIHMWDAYTGQLRATYRAFDHLDEITAAFSVAFNATGDKIFAG 196          
BLAST of mRNA_E-fasciculatus_F_contig11996.1550.1 vs. uniprot
Match: K3WVC6_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WVC6_GLOUD)

HSP 1 Score: 145 bits (365), Expect = 2.120e-39
Identity = 73/128 (57.03%), Postives = 87/128 (67.97%), Query Frame = 0
Query:    1 SPDGTCLLTSSDDTVLRVFEKR---QAPSVTVDDAASSAHSHFTDDWSPCLYSVEGETVYDFAWYPHMSSSEPATSVFVSTSRDHPLHMWDAFTGNLRATYRAYDHLDEVVAANSVCFNTAGDKIFAG 125
            SPDG C+LT+S+D VLR+FE     QAP+ T                   L + EG  VYDFAWYP M+S  P + +FVSTSRD P+HMWDA+TG+LRATYRAYDHLDE+ AANS+ FNT GDKIF G
Sbjct:   48 SPDGLCMLTNSEDHVLRLFEMSDDVQAPAAT-----------------SILQAKEGGAVYDFAWYPFMNSQVPESCIFVSTSRDQPVHMWDAYTGDLRATYRAYDHLDEIAAANSIAFNTTGDKIFCG 158          
BLAST of mRNA_E-fasciculatus_F_contig11996.1550.1 vs. uniprot
Match: A0A6P5NDW7_ARADU (telomerase Cajal body protein 1 isoform X2 n=2 Tax=Arachis duranensis TaxID=130453 RepID=A0A6P5NDW7_ARADU)

HSP 1 Score: 142 bits (357), Expect = 3.530e-39
Identity = 67/125 (53.60%), Postives = 88/125 (70.40%), Query Frame = 0
Query:    1 SPDGTCLLTSSDDTVLRVFEKRQAPSVTVDDAASSAHSHFTDDWSPCLYSVEGETVYDFAWYPHMSSSEPATSVFVSTSRDHPLHMWDAFTGNLRATYRAYDHLDEVVAANSVCFNTAGDKIFAG 125
            SPDG+C LT+SDD  LR+F      + T+ DA+ S      D ++  L   EGE ++DF WYP+MS+S+P T+VF +T+RDHP+H+WDA  G LR TYRAYD++DE+ AA SV FN AG KIFAG
Sbjct:   58 SPDGSCFLTTSDDNTLRIFTLPDPEAATLVDASQSDD----DSFAASLVMSEGEPIHDFCWYPYMSASDPVTNVFATTTRDHPIHLWDATLGQLRCTYRAYDNMDEITAAFSVAFNPAGTKIFAG 178          
BLAST of mRNA_E-fasciculatus_F_contig11996.1550.1 vs. uniprot
Match: A0A8B8NCY5_9MYRT (telomerase Cajal body protein 1-like n=1 Tax=Rhodamnia argentea TaxID=178133 RepID=A0A8B8NCY5_9MYRT)

HSP 1 Score: 138 bits (348), Expect = 5.800e-39
Identity = 70/126 (55.56%), Postives = 88/126 (69.84%), Query Frame = 0
Query:    1 SPDGTCLLTSSDDTVLRVFEKRQAPSVTVDDAASSAHSHFTDDWSPCLYSV-EGETVYDFAWYPHMSSSEPATSVFVSTSRDHPLHMWDAFTGNLRATYRAYDHLDEVVAANSVCFNTAGDKIFAG 125
            SPDGTC L+SS+D  LRVF     P   VDD+A +  S    D     + V EGE+VYDF WYP+MS+++P + VF ST+RD P+H+WDA TG LR TYRAYD +DE+ AA S+ FN AG+KIFAG
Sbjct:   61 SPDGTCFLSSSEDNTLRVFT---LPDYGVDDSAKAISSDVDQDSFTANHVVTEGESVYDFCWYPYMSATDPVSCVFASTTRDLPIHVWDATTGQLRCTYRAYDAVDEITAAFSIAFNPAGNKIFAG 183          
BLAST of mRNA_E-fasciculatus_F_contig11996.1550.1 vs. uniprot
Match: A0A6P5NHT4_ARADU (telomerase Cajal body protein 1 isoform X1 n=15 Tax=Arachis TaxID=3817 RepID=A0A6P5NHT4_ARADU)

HSP 1 Score: 142 bits (357), Expect = 1.310e-38
Identity = 67/125 (53.60%), Postives = 88/125 (70.40%), Query Frame = 0
Query:    1 SPDGTCLLTSSDDTVLRVFEKRQAPSVTVDDAASSAHSHFTDDWSPCLYSVEGETVYDFAWYPHMSSSEPATSVFVSTSRDHPLHMWDAFTGNLRATYRAYDHLDEVVAANSVCFNTAGDKIFAG 125
            SPDG+C LT+SDD  LR+F      + T+ DA+ S      D ++  L   EGE ++DF WYP+MS+S+P T+VF +T+RDHP+H+WDA  G LR TYRAYD++DE+ AA SV FN AG KIFAG
Sbjct:   58 SPDGSCFLTTSDDNTLRIFTLPDPEAATLVDASQSDD----DSFAASLVMSEGEPIHDFCWYPYMSASDPVTNVFATTTRDHPIHLWDATLGQLRCTYRAYDNMDEITAAFSVAFNPAGTKIFAG 178          
BLAST of mRNA_E-fasciculatus_F_contig11996.1550.1 vs. uniprot
Match: A0A059C9R8_EUCGR (Uncharacterized protein n=3 Tax=Eucalyptus grandis TaxID=71139 RepID=A0A059C9R8_EUCGR)

HSP 1 Score: 142 bits (359), Expect = 3.070e-38
Identity = 70/126 (55.56%), Postives = 92/126 (73.02%), Query Frame = 0
Query:    1 SPDGTCLLTSSDDTVLRVFEKRQAPSVTVDDAASSAHSHFTDD-WSPCLYSVEGETVYDFAWYPHMSSSEPATSVFVSTSRDHPLHMWDAFTGNLRATYRAYDHLDEVVAANSVCFNTAGDKIFAG 125
            SPDGTCLL+SS+D  LRVF     P    D +A+++ S   +D ++  L   EGE+VYDF WYP+MS+++P + VF ST+RDHP+H+WDA TG LR TYRAYD +DE+ AA S+ FN AG+KIFAG
Sbjct:   67 SPDGTCLLSSSEDNTLRVFA---LPEYGGDHSANASSSKLDEDSFAANLVVTEGESVYDFCWYPYMSATDPVSCVFASTTRDHPIHVWDATTGQLRCTYRAYDGVDEITAAFSIAFNPAGNKIFAG 189          
BLAST of mRNA_E-fasciculatus_F_contig11996.1550.1 vs. uniprot
Match: UPI0011D24311 (telomerase Cajal body protein 1 isoform X1 n=2 Tax=Syzygium oleosum TaxID=219896 RepID=UPI0011D24311)

HSP 1 Score: 142 bits (358), Expect = 4.370e-38
Identity = 70/126 (55.56%), Postives = 90/126 (71.43%), Query Frame = 0
Query:    1 SPDGTCLLTSSDDTVLRVFEKRQAPSVTVDDAASSAHSHFT-DDWSPCLYSVEGETVYDFAWYPHMSSSEPATSVFVSTSRDHPLHMWDAFTGNLRATYRAYDHLDEVVAANSVCFNTAGDKIFAG 125
            SPDGTCLL+SS+D  LRVF     P    DD  +++ S    D ++  L   EGE+VYDF WYP+MS+++P + VF ST+RDHP+H+WDA TG LR TYRAYD +DE+ AA S+ FN AG+KIFAG
Sbjct:   65 SPDGTCLLSSSEDNTLRVFA---LPDYGGDDGTNASSSDVDRDSFAANLVVTEGESVYDFCWYPYMSATDPVSCVFASTTRDHPIHVWDATTGQLRCTYRAYDAVDEITAAFSIAFNPAGNKIFAG 187          
BLAST of mRNA_E-fasciculatus_F_contig11996.1550.1 vs. uniprot
Match: UPI00051B9E35 (telomerase Cajal body protein 1-like n=1 Tax=Nicotiana tomentosiformis TaxID=4098 RepID=UPI00051B9E35)

HSP 1 Score: 136 bits (342), Expect = 5.560e-38
Identity = 69/125 (55.20%), Postives = 84/125 (67.20%), Query Frame = 0
Query:    1 SPDGTCLLTSSDDTVLRVFEKRQAPSVTVDDAASSAHSHFTDDWSPCLYSVEGETVYDFAWYPHMSSSEPATSVFVSTSRDHPLHMWDAFTGNLRATYRAYDHLDEVVAANSVCFNTAGDKIFAG 125
            SPDG+C LT SDD     F      S  + D +SSA    TD ++  L   EGE+VYD+  YP+MSSS P T VF ST+RDHP+H+WDA TG LR TYRAYD +DE++AA S+ FN AG KIFAG
Sbjct:   42 SPDGSCFLTCSDDNTFCSFTLPYVESGWLADTSSSAAD--TDSYAASLVMSEGESVYDYCRYPYMSSSSPETCVFASTARDHPIHLWDATTGQLRCTYRAYDAMDEIIAAFSIAFNPAGTKIFAG 164          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig11996.1550.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LRT3_ECTSI5.480e-7889.55Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
UPI00192EEB6A1.650e-4156.35telomerase Cajal body protein 1-like n=1 Tax=Eucal... [more]
A0A8K1FL14_PYTOL2.360e-4056.00Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
K3WVC6_GLOUD2.120e-3957.03Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
A0A6P5NDW7_ARADU3.530e-3953.60telomerase Cajal body protein 1 isoform X2 n=2 Tax... [more]
A0A8B8NCY5_9MYRT5.800e-3955.56telomerase Cajal body protein 1-like n=1 Tax=Rhoda... [more]
A0A6P5NHT4_ARADU1.310e-3853.60telomerase Cajal body protein 1 isoform X1 n=15 Ta... [more]
A0A059C9R8_EUCGR3.070e-3855.56Uncharacterized protein n=3 Tax=Eucalyptus grandis... [more]
UPI0011D243114.370e-3855.56telomerase Cajal body protein 1 isoform X1 n=2 Tax... [more]
UPI00051B9E355.560e-3855.20telomerase Cajal body protein 1-like n=1 Tax=Nicot... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 1..127
e-value: 8.8E-10
score: 39.8
NoneNo IPR availablePANTHERPTHR13211UNCHARACTERIZEDcoord: 1..125
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 1..125

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig11996contigE-fasciculatus_F_contig11996:2690..3629 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig11996.1550.1mRNA_E-fasciculatus_F_contig11996.1550.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig11996 2690..3629 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig11996.1550.1 ID=prot_E-fasciculatus_F_contig11996.1550.1|Name=mRNA_E-fasciculatus_F_contig11996.1550.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=128bp
SPDGTCLLTSSDDTVLRVFEKRQAPSVTVDDAASSAHSHFTDDWSPCLYS
VEGETVYDFAWYPHMSSSEPATSVFVSTSRDHPLHMWDAFTGNLRATYRA
YDHLDEVVAANSVCFNTAGDKIFAGAG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036322WD40_repeat_dom_sf
IPR015943WD40/YVTN_repeat-like_dom_sf