mRNA_E-fasciculatus_F_contig11945.1519.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig11945.1519.1 vs. uniprot
Match: D7FS31_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FS31_ECTSI) HSP 1 Score: 431 bits (1109), Expect = 2.070e-140 Identity = 227/238 (95.38%), Postives = 233/238 (97.90%), Query Frame = 2
Query: 2 VVAKVVGRQGIGGAXXXXXXXXXXXXXXGVLSSPLSDEERDVRVAELMSFGVDLPYEMLLTLLRYKDWGPEAATALYQSLVAAGKGLLEKVNPGAPVRGMQNGGNTCYIDSLLFAMFATLDAFDWLLFKPLPSTDPPEARLLQKHLRFLVNEVRGGATVPREHSNLIRTHLRRCGWQGGASTQEDVTELFTFLVCLLRCPALPLSEALFHGGKVDAGDSRISTERALFLALPEADKET 715
VVAKVVGRQG+GG XXXXXXXXXXXXXGVLSSPLSDEERDVRVAELMSFGVDLPYEMLLTLLRYKDWGPEAATALYQSLVAAGKGLLEKVNPGAPVRGMQNGGNTCYIDSLLFAMFATLDAFDWLLFKPLPSTDPPE +LLQKHLRFLVN++R GAT+PREHSNLIRTHLRRCGWQGGASTQEDVTELFTFLVCLLRCPALPLSEALFHGG VDAGDSRISTERALFLALPEA+KET
Sbjct: 594 VVAKVVGRQGLGGTGXXXXXXXXXXXXXGVLSSPLSDEERDVRVAELMSFGVDLPYEMLLTLLRYKDWGPEAATALYQSLVAAGKGLLEKVNPGAPVRGMQNGGNTCYIDSLLFAMFATLDAFDWLLFKPLPSTDPPEVKLLQKHLRFLVNQLREGATIPREHSNLIRTHLRRCGWQGGASTQEDVTELFTFLVCLLRCPALPLSEALFHGGNVDAGDSRISTERALFLALPEAEKET 831
BLAST of mRNA_E-fasciculatus_F_contig11945.1519.1 vs. uniprot
Match: A0A6H5L1X4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1X4_9PHAE) HSP 1 Score: 426 bits (1095), Expect = 2.760e-138 Identity = 215/240 (89.58%), Postives = 220/240 (91.67%), Query Frame = 2
Query: 2 VVAKVVGRQGIGGAXXXXXXXXXXXXXXGVLSSPLSDEERDVRVAELMSFGVDLPYEMLLTLLRYKDWGPEAATALYQSLVAAGKGLLEKVNPGAPVRGMQNGGNTCYIDSLLFAMFATLDAFDWLLFKPLPSTDPPEAR--LLQKHLRFLVNEVRGGATVPREHSNLIRTHLRRCGWQGGASTQEDVTELFTFLVCLLRCPALPLSEALFHGGKVDAGDSRISTERALFLALPEADKET 715
VVAKVVGRQG+GG GVL SPLSDEERDVRVAELMSFGVDLPYEMLLTLLRYKDWGPEAATALYQSLVAAGKGLLE+VNPGAPVRGMQNGGNTCYIDSLLFAMFATLDAFDWLLFKPLPSTDPPEAR LLQKHLRFLVN++R GATVPREHSNLIRTHLRRCGWQGGASTQEDVTELFTFLVCLLRCPALPLSEALFHGG VDAGDSRISTERALFLALPEA+KET
Sbjct: 553 VVAKVVGRQGLGGIGSAKGSEGGGDGEGGVLPSPLSDEERDVRVAELMSFGVDLPYEMLLTLLRYKDWGPEAATALYQSLVAAGKGLLERVNPGAPVRGMQNGGNTCYIDSLLFAMFATLDAFDWLLFKPLPSTDPPEARVKLLQKHLRFLVNQLREGATVPREHSNLIRTHLRRCGWQGGASTQEDVTELFTFLVCLLRCPALPLSEALFHGGNVDAGDSRISTERALFLALPEAEKET 792
BLAST of mRNA_E-fasciculatus_F_contig11945.1519.1 vs. uniprot
Match: A0A836CLH8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLH8_9STRA) HSP 1 Score: 173 bits (438), Expect = 5.800e-46 Identity = 97/186 (52.15%), Postives = 120/186 (64.52%), Query Frame = 2
Query: 104 LSDEERDVRVAELMSFGV-DLPYEMLLTLLRYKDWGPEAATALYQSLVAAGKGLLEKVNPGAP--VRGMQNGGNTCYIDSLLFAMFATLDAFDWLLFKPLPSTDPPEARLLQKHLRFLVNEVRGGATVPREHSNLIRTHLRRCGW---------QGGASTQEDVTELFTFLVCLLRCPALPLSEAL 625
LS++++ +R+A+L S V L L+ LLR+ DW + A ALYQ LVAAGKG LE V P AP VRG NGGNTCY+DSLLFAMFA AFDWLL KPL TDP LLQ +LRF V ++R GA VP +H+N+IR L CGW G +Q+DV+EL+ FL+ L R P LP + L
Sbjct: 275 LSEDDQRLRMAQLASLHVAGLGEAELVLLLRHCDWSAQRAAALYQELVAAGKGFLEPV-PAAPERVRGATNGGNTCYLDSLLFAMFACTSAFDWLLMKPLRRTDPASLHLLQMNLRFFVGQMRRGALVPGDHANVIRRCLVGCGWGTAAGVGGDSGALHSQQDVSELYGFLLSLFRAPTLPAVQLL 459
BLAST of mRNA_E-fasciculatus_F_contig11945.1519.1 vs. uniprot
Match: A0A261Y7V0_9FUNG (USP domain-containing protein n=1 Tax=Bifiguratus adelaidae TaxID=1938954 RepID=A0A261Y7V0_9FUNG) HSP 1 Score: 135 bits (340), Expect = 2.510e-33 Identity = 78/180 (43.33%), Postives = 105/180 (58.33%), Query Frame = 2
Query: 176 LLTLLRYKDWGPEAATALYQSLVAAGKGLLEKVNPGAPVRGMQNGGNT-CYIDSLLFAMFATLDAFDWLLFKPLPSTDPPEARLLQKHLRFLVNEVRGGATVPREHSNLIRTHLRRCGWQG-----GASTQEDVTELFTFLVCLLRCPALPLSEALFHGGKVDAGDSRISTERALFLALP 697
++ LL+ DW +AA ++++ A +G+L ++NP + G +N T CYIDSLLFAMF +L AF+ +LF T E + LQ LR VN +R G V + + +R L CGW G G TQEDVTELF FL R P LP+ LFHG VDA D R++TER L L++P
Sbjct: 96 VILLLKRNDWNSDAAIQEVKNIMDAEEGVLVEINPDVTLVGAENEMLTSCYIDSLLFAMFVSLIAFEPMLFV---ETSDAETKRLQTLLRLFVNNLRSGKLVRVDAVHELRVQLLNCGWTGLDRVHGVPTQEDVTELFLFLTNKFRLPYLPVQVRLFHGANVDADDDRMTTERMLSLSIP 272
BLAST of mRNA_E-fasciculatus_F_contig11945.1519.1 vs. uniprot
Match: A0A397G3K6_9GLOM (USP domain-containing protein n=1 Tax=Diversispora epigaea TaxID=1348612 RepID=A0A397G3K6_9GLOM) HSP 1 Score: 130 bits (328), Expect = 1.020e-31 Identity = 79/191 (41.36%), Postives = 99/191 (51.83%), Query Frame = 2
Query: 140 LMSFGVDLPYEMLLTLLRYKDWGPEAATALYQSLVAAGKGLLEKVNPGAPVRGMQNGGNT-CYIDSLLFAMFATLDAFDWLLFKPLPSTDPPEARLLQKHLRFLVNEVRGGATVPREHSNLIRTHLRRCGWQG----GASTQEDVTELFTFLVCLLRCPALPLSEALFHGGKVDAGDSRISTERALFLALP 697
L G L + TLL DW + L A +GL+ + + G +N NT CYIDSLLFAMFA +FD +LF +T + R LQ HLR VN +R G + +R L CGW G G +TQEDV+ELF FL CL P LPL LFHGG D D R+ TER + +A+P
Sbjct: 75 LEELGNPLETSQIETLLERNDWNVAEVAEYCKDLCEAEEGLIADLQKNDVMIGAENDQNTSCYIDSLLFAMFARTQSFDGMLFAQPENT---KVRDLQTHLRLFVNRLRKGKFMSAYMIKQLREQLLNCGWIGKNDAGHTTQEDVSELFLFLSCLYELPYLPLGMHLFHGGNKDPNDERVVTERLIQVAIP 262
BLAST of mRNA_E-fasciculatus_F_contig11945.1519.1 vs. uniprot
Match: A0A015LYV1_RHIIW (USP domain-containing protein n=8 Tax=Glomeraceae TaxID=36751 RepID=A0A015LYV1_RHIIW) HSP 1 Score: 122 bits (305), Expect = 1.420e-28 Identity = 77/212 (36.32%), Postives = 106/212 (50.00%), Query Frame = 2
Query: 95 SSPL--SDEERDVRVAELMSF----GVDLPYEMLLTLLRYKDWGPEAATALYQSLVAAGKGLLEKVNPGAPVRGMQNGGNT-CYIDSLLFAMFATLDAFDWLLFKPLPSTDPPEARLLQKHLRFLVNEVRGGATVPREHSNLIRTHLRRCGWQG----GASTQEDVTELFTFLVCLLRCPALPLSEALFHGGKVDAGDSRISTERALFLALP 697
SSPL +D E++ ++ +L ++ G L + LL W + L A +G++ + + G +N T CYIDS+LF MFA +FD LLF + AR+LQ HLR VN +R G + +R L CGW G G TQED +E F FL CL P LPL LFHG DA D R+ TER + +++P
Sbjct: 34 SSPLPTNDIEQESKIDQLSTYLEELGHPLDTSQIEKLLELNAWNVREVAEHFSDLGEAEEGIIVDIQKDIVMLGCENDRMTSCYIDSVLFTMFARTQSFDGLLFV---QAEGVNARVLQTHLRLFVNRLRSGKFINSYMIKQLRECLISCGWIGEDNYGNPTQEDASEFFLFLSCLYELPYLPLGMHLFHGASADANDERVITERLIQVSIP 242
BLAST of mRNA_E-fasciculatus_F_contig11945.1519.1 vs. uniprot
Match: A0A433Q8L8_9FUNG (Ubiquitin carboxyl-terminal hydrolase-domain-containing protein n=2 Tax=Jimgerdemannia flammicorona TaxID=994334 RepID=A0A433Q8L8_9FUNG) HSP 1 Score: 120 bits (300), Expect = 7.730e-28 Identity = 80/194 (41.24%), Postives = 99/194 (51.03%), Query Frame = 2
Query: 152 GVDLPYEMLLTLLRYKDWGPEAATALYQSLVAAGKGLLEKVNPGAPVRGMQNGGNT-CYIDSLLFAMFATLDAFDWLLFK-PLPST--DPPEARLLQKHLRFLVNEVRGGATVPREHSNLIRTHLRRCGWQGG-----ASTQEDVTELFTFLVCLLRCPALPLSEALFHGGKVDAGDSRISTERALFLALPEAD 706
GV Y + TLL +W + AT + L+ A +GLL + + G +N T CYIDSLLFAMF F+ LL P ST P +AR LQ +R VN +R G V +R L CGW+G A TQED +ELF FL LL P LP LFHG D D R+ TER L L++P D
Sbjct: 65 GVRPEYHQVQTLLGQNNWELKEATEEIKDLLDADEGLLVPFDNRRIMLGAENDEYTSCYIDSLLFAMFIPFSTFEPLLLSTPAVSTFVKPLDARRLQTSIRLFVNRLRSGKLVTTRIVRQLREDLACCGWKGRDPRSRAFTQEDTSELFLFLTELLELPYLPFQIRLFHGANADNDDDRLMTERMLTLSIPTPD 258
BLAST of mRNA_E-fasciculatus_F_contig11945.1519.1 vs. uniprot
Match: U9T6Q1_RHIID (USP domain-containing protein n=5 Tax=Rhizophagus TaxID=1129544 RepID=U9T6Q1_RHIID) HSP 1 Score: 117 bits (292), Expect = 6.840e-27 Identity = 70/187 (37.43%), Postives = 91/187 (48.66%), Query Frame = 2
Query: 152 GVDLPYEMLLTLLRYKDWGPEAATALYQSLVAAGKGLLEKVNPGAPVRGMQNGGNT-CYIDSLLFAMFATLDAFDWLLFKPLPSTDPPEARLLQKHLRFLVNEVRGGATVPREHSNLIRTHLRRCGWQG----GASTQEDVTELFTFLVCLLRCPALPLSEALFHGGKVDAGDSRISTERALFLALP 697
G L + LL W + L A +G++ + + G +N T CYIDS+LF MFA +FD LLF + AR+LQ HLR VN +R G + +R L CGW G G TQED +E F FL CL P LPL LFHG DA D R+ TER + +++P
Sbjct: 26 GHPLDTSQIEKLLELNAWNVREVAEHFSDLGEAEEGIIVDIQKDIVMLGCENDRMTSCYIDSVLFTMFARTQSFDGLLFV---QAEGVNARVLQTHLRLFVNRLRSGKFINSYMIKQLRECLISCGWIGEDNYGNPTQEDASEFFLFLSCLYELPYLPLGMHLFHGASADANDERVITERLIQVSIP 209
BLAST of mRNA_E-fasciculatus_F_contig11945.1519.1 vs. uniprot
Match: A0A433PUY0_9FUNG (Ubiquitin carboxyl-terminal hydrolase-domain-containing protein n=1 Tax=Endogone sp. FLAS-F59071 TaxID=2340872 RepID=A0A433PUY0_9FUNG) HSP 1 Score: 114 bits (285), Expect = 1.440e-25 Identity = 72/190 (37.89%), Postives = 94/190 (49.47%), Query Frame = 2
Query: 152 GVDLPYEMLLTLLRYKDWGPEAATALYQSLVAAGKGLLEKVNPGAPVRGMQNGGNT-CYIDSLLFAMFATLDAFDWLLFKPLPSTDPPEARLLQKHLRFLVNEVRGGATVPREHSNLIRTHLRRCGWQG-----GASTQEDVTELFTFLVCLLRCPALPLSEALFHGGKVDAGDSRISTERALFLALPEA 703
GV + + LL DW + A + L+ A +GLL + + G +N T CYIDSLLFAMF F+ LL + D AR LQ +R +N +R G V +R L RCGW G G +QED +ELF FL L + P LP LFHG D D R+ TER + L++P A
Sbjct: 67 GVRSEHHQVQELLERNDWELKKAIEEVRDLLDADEGLLVAFDREKTMLGAENDEYTSCYIDSLLFAMFVPFSTFEPLLHSSPANLD---ARRLQTSIRLFINRLRSGKLVTTRTVRQLREDLARCGWNGRDLRSGNFSQEDTSELFLFLTDLFQLPYLPFQIKLFHGADADNDDDRLMTERMVTLSIPAA 253
BLAST of mRNA_E-fasciculatus_F_contig11945.1519.1 vs. uniprot
Match: A0A4P9XS99_9FUNG (Ubiquitin carboxyl-terminal hydrolase-domain-containing protein n=1 Tax=Thamnocephalis sphaerospora TaxID=78915 RepID=A0A4P9XS99_9FUNG) HSP 1 Score: 114 bits (286), Expect = 1.590e-25 Identity = 73/188 (38.83%), Postives = 100/188 (53.19%), Query Frame = 2
Query: 209 PEAATALYQSLVAAGKGLLEKVNPGAPVRGMQN-GGNTCYIDSLLFAMFATLDAFDWLLFKPLPSTDPPEARLLQKHLRFLVNEVRGGATVPREHSNLIRTHLRRCGWQG---GAS----------------TQEDVTELFTFLVCLLRCPALPLSEALFHGGKVDAGDSRISTERALFLALPEADKE 712
P+AA + + A +L G G++N G +CYIDSL+FAMFA D FD LL +P +P +R+ Q R +VN++R G TVPR+ + L CGW+G G++ TQED ELF FL LL P LP + H G+VD+ D R+ TER L LA+PE ++E
Sbjct: 42 PDAANTADEGMALAKGCVLLPPASGMRTSGIENFNGTSCYIDSLIFAMFACQDGFDALL-QPRKLANPQASRV-QVTCRLMVNQLRSGRTVPRQIVRQLCEDLAACGWRGMDTGSAQPNGRDATLAPQTLKTTQEDAAELFMFLTDLLELPYLPFKMHILHSGRVDSDDDRLITERLLQLAIPEEEEE 227 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig11945.1519.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig11945.1519.1 >prot_E-fasciculatus_F_contig11945.1519.1 ID=prot_E-fasciculatus_F_contig11945.1519.1|Name=mRNA_E-fasciculatus_F_contig11945.1519.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=124bp GGRQGGWQTGHRGCRKRRRRQGWRGRRGRGAVVTVVGRREGCKGGRAHELback to top mRNA from alignment at E-fasciculatus_F_contig11945:513..4154- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig11945.1519.1 ID=mRNA_E-fasciculatus_F_contig11945.1519.1|Name=mRNA_E-fasciculatus_F_contig11945.1519.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=3642bp|location=Sequence derived from alignment at E-fasciculatus_F_contig11945:513..4154- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig11945:513..4154- >mRNA_E-fasciculatus_F_contig11945.1519.1 ID=mRNA_E-fasciculatus_F_contig11945.1519.1|Name=mRNA_E-fasciculatus_F_contig11945.1519.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=744bp|location=Sequence derived from alignment at E-fasciculatus_F_contig11945:513..4154- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |