mRNA_E-fasciculatus_F_contig11945.1519.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-fasciculatus_F_contig11945.1519.1
Unique NamemRNA_E-fasciculatus_F_contig11945.1519.1
TypemRNA
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Homology
BLAST of mRNA_E-fasciculatus_F_contig11945.1519.1 vs. uniprot
Match: D7FS31_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FS31_ECTSI)

HSP 1 Score: 431 bits (1109), Expect = 2.070e-140
Identity = 227/238 (95.38%), Postives = 233/238 (97.90%), Query Frame = 2
Query:    2 VVAKVVGRQGIGGAXXXXXXXXXXXXXXGVLSSPLSDEERDVRVAELMSFGVDLPYEMLLTLLRYKDWGPEAATALYQSLVAAGKGLLEKVNPGAPVRGMQNGGNTCYIDSLLFAMFATLDAFDWLLFKPLPSTDPPEARLLQKHLRFLVNEVRGGATVPREHSNLIRTHLRRCGWQGGASTQEDVTELFTFLVCLLRCPALPLSEALFHGGKVDAGDSRISTERALFLALPEADKET 715
            VVAKVVGRQG+GG  XXXXXXXXXXXXXGVLSSPLSDEERDVRVAELMSFGVDLPYEMLLTLLRYKDWGPEAATALYQSLVAAGKGLLEKVNPGAPVRGMQNGGNTCYIDSLLFAMFATLDAFDWLLFKPLPSTDPPE +LLQKHLRFLVN++R GAT+PREHSNLIRTHLRRCGWQGGASTQEDVTELFTFLVCLLRCPALPLSEALFHGG VDAGDSRISTERALFLALPEA+KET
Sbjct:  594 VVAKVVGRQGLGGTGXXXXXXXXXXXXXGVLSSPLSDEERDVRVAELMSFGVDLPYEMLLTLLRYKDWGPEAATALYQSLVAAGKGLLEKVNPGAPVRGMQNGGNTCYIDSLLFAMFATLDAFDWLLFKPLPSTDPPEVKLLQKHLRFLVNQLREGATIPREHSNLIRTHLRRCGWQGGASTQEDVTELFTFLVCLLRCPALPLSEALFHGGNVDAGDSRISTERALFLALPEAEKET 831          
BLAST of mRNA_E-fasciculatus_F_contig11945.1519.1 vs. uniprot
Match: A0A6H5L1X4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1X4_9PHAE)

HSP 1 Score: 426 bits (1095), Expect = 2.760e-138
Identity = 215/240 (89.58%), Postives = 220/240 (91.67%), Query Frame = 2
Query:    2 VVAKVVGRQGIGGAXXXXXXXXXXXXXXGVLSSPLSDEERDVRVAELMSFGVDLPYEMLLTLLRYKDWGPEAATALYQSLVAAGKGLLEKVNPGAPVRGMQNGGNTCYIDSLLFAMFATLDAFDWLLFKPLPSTDPPEAR--LLQKHLRFLVNEVRGGATVPREHSNLIRTHLRRCGWQGGASTQEDVTELFTFLVCLLRCPALPLSEALFHGGKVDAGDSRISTERALFLALPEADKET 715
            VVAKVVGRQG+GG               GVL SPLSDEERDVRVAELMSFGVDLPYEMLLTLLRYKDWGPEAATALYQSLVAAGKGLLE+VNPGAPVRGMQNGGNTCYIDSLLFAMFATLDAFDWLLFKPLPSTDPPEAR  LLQKHLRFLVN++R GATVPREHSNLIRTHLRRCGWQGGASTQEDVTELFTFLVCLLRCPALPLSEALFHGG VDAGDSRISTERALFLALPEA+KET
Sbjct:  553 VVAKVVGRQGLGGIGSAKGSEGGGDGEGGVLPSPLSDEERDVRVAELMSFGVDLPYEMLLTLLRYKDWGPEAATALYQSLVAAGKGLLERVNPGAPVRGMQNGGNTCYIDSLLFAMFATLDAFDWLLFKPLPSTDPPEARVKLLQKHLRFLVNQLREGATVPREHSNLIRTHLRRCGWQGGASTQEDVTELFTFLVCLLRCPALPLSEALFHGGNVDAGDSRISTERALFLALPEAEKET 792          
BLAST of mRNA_E-fasciculatus_F_contig11945.1519.1 vs. uniprot
Match: A0A836CLH8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLH8_9STRA)

HSP 1 Score: 173 bits (438), Expect = 5.800e-46
Identity = 97/186 (52.15%), Postives = 120/186 (64.52%), Query Frame = 2
Query:  104 LSDEERDVRVAELMSFGV-DLPYEMLLTLLRYKDWGPEAATALYQSLVAAGKGLLEKVNPGAP--VRGMQNGGNTCYIDSLLFAMFATLDAFDWLLFKPLPSTDPPEARLLQKHLRFLVNEVRGGATVPREHSNLIRTHLRRCGW---------QGGASTQEDVTELFTFLVCLLRCPALPLSEAL 625
            LS++++ +R+A+L S  V  L    L+ LLR+ DW  + A ALYQ LVAAGKG LE V P AP  VRG  NGGNTCY+DSLLFAMFA   AFDWLL KPL  TDP    LLQ +LRF V ++R GA VP +H+N+IR  L  CGW          G   +Q+DV+EL+ FL+ L R P LP  + L
Sbjct:  275 LSEDDQRLRMAQLASLHVAGLGEAELVLLLRHCDWSAQRAAALYQELVAAGKGFLEPV-PAAPERVRGATNGGNTCYLDSLLFAMFACTSAFDWLLMKPLRRTDPASLHLLQMNLRFFVGQMRRGALVPGDHANVIRRCLVGCGWGTAAGVGGDSGALHSQQDVSELYGFLLSLFRAPTLPAVQLL 459          
BLAST of mRNA_E-fasciculatus_F_contig11945.1519.1 vs. uniprot
Match: A0A261Y7V0_9FUNG (USP domain-containing protein n=1 Tax=Bifiguratus adelaidae TaxID=1938954 RepID=A0A261Y7V0_9FUNG)

HSP 1 Score: 135 bits (340), Expect = 2.510e-33
Identity = 78/180 (43.33%), Postives = 105/180 (58.33%), Query Frame = 2
Query:  176 LLTLLRYKDWGPEAATALYQSLVAAGKGLLEKVNPGAPVRGMQNGGNT-CYIDSLLFAMFATLDAFDWLLFKPLPSTDPPEARLLQKHLRFLVNEVRGGATVPREHSNLIRTHLRRCGWQG-----GASTQEDVTELFTFLVCLLRCPALPLSEALFHGGKVDAGDSRISTERALFLALP 697
            ++ LL+  DW  +AA    ++++ A +G+L ++NP   + G +N   T CYIDSLLFAMF +L AF+ +LF     T   E + LQ  LR  VN +R G  V  +  + +R  L  CGW G     G  TQEDVTELF FL    R P LP+   LFHG  VDA D R++TER L L++P
Sbjct:   96 VILLLKRNDWNSDAAIQEVKNIMDAEEGVLVEINPDVTLVGAENEMLTSCYIDSLLFAMFVSLIAFEPMLFV---ETSDAETKRLQTLLRLFVNNLRSGKLVRVDAVHELRVQLLNCGWTGLDRVHGVPTQEDVTELFLFLTNKFRLPYLPVQVRLFHGANVDADDDRMTTERMLSLSIP 272          
BLAST of mRNA_E-fasciculatus_F_contig11945.1519.1 vs. uniprot
Match: A0A397G3K6_9GLOM (USP domain-containing protein n=1 Tax=Diversispora epigaea TaxID=1348612 RepID=A0A397G3K6_9GLOM)

HSP 1 Score: 130 bits (328), Expect = 1.020e-31
Identity = 79/191 (41.36%), Postives = 99/191 (51.83%), Query Frame = 2
Query:  140 LMSFGVDLPYEMLLTLLRYKDWGPEAATALYQSLVAAGKGLLEKVNPGAPVRGMQNGGNT-CYIDSLLFAMFATLDAFDWLLFKPLPSTDPPEARLLQKHLRFLVNEVRGGATVPREHSNLIRTHLRRCGWQG----GASTQEDVTELFTFLVCLLRCPALPLSEALFHGGKVDAGDSRISTERALFLALP 697
            L   G  L    + TLL   DW         + L  A +GL+  +     + G +N  NT CYIDSLLFAMFA   +FD +LF    +T   + R LQ HLR  VN +R G  +       +R  L  CGW G    G +TQEDV+ELF FL CL   P LPL   LFHGG  D  D R+ TER + +A+P
Sbjct:   75 LEELGNPLETSQIETLLERNDWNVAEVAEYCKDLCEAEEGLIADLQKNDVMIGAENDQNTSCYIDSLLFAMFARTQSFDGMLFAQPENT---KVRDLQTHLRLFVNRLRKGKFMSAYMIKQLREQLLNCGWIGKNDAGHTTQEDVSELFLFLSCLYELPYLPLGMHLFHGGNKDPNDERVVTERLIQVAIP 262          
BLAST of mRNA_E-fasciculatus_F_contig11945.1519.1 vs. uniprot
Match: A0A015LYV1_RHIIW (USP domain-containing protein n=8 Tax=Glomeraceae TaxID=36751 RepID=A0A015LYV1_RHIIW)

HSP 1 Score: 122 bits (305), Expect = 1.420e-28
Identity = 77/212 (36.32%), Postives = 106/212 (50.00%), Query Frame = 2
Query:   95 SSPL--SDEERDVRVAELMSF----GVDLPYEMLLTLLRYKDWGPEAATALYQSLVAAGKGLLEKVNPGAPVRGMQNGGNT-CYIDSLLFAMFATLDAFDWLLFKPLPSTDPPEARLLQKHLRFLVNEVRGGATVPREHSNLIRTHLRRCGWQG----GASTQEDVTELFTFLVCLLRCPALPLSEALFHGGKVDAGDSRISTERALFLALP 697
            SSPL  +D E++ ++ +L ++    G  L    +  LL    W        +  L  A +G++  +     + G +N   T CYIDS+LF MFA   +FD LLF      +   AR+LQ HLR  VN +R G  +       +R  L  CGW G    G  TQED +E F FL CL   P LPL   LFHG   DA D R+ TER + +++P
Sbjct:   34 SSPLPTNDIEQESKIDQLSTYLEELGHPLDTSQIEKLLELNAWNVREVAEHFSDLGEAEEGIIVDIQKDIVMLGCENDRMTSCYIDSVLFTMFARTQSFDGLLFV---QAEGVNARVLQTHLRLFVNRLRSGKFINSYMIKQLRECLISCGWIGEDNYGNPTQEDASEFFLFLSCLYELPYLPLGMHLFHGASADANDERVITERLIQVSIP 242          
BLAST of mRNA_E-fasciculatus_F_contig11945.1519.1 vs. uniprot
Match: A0A433Q8L8_9FUNG (Ubiquitin carboxyl-terminal hydrolase-domain-containing protein n=2 Tax=Jimgerdemannia flammicorona TaxID=994334 RepID=A0A433Q8L8_9FUNG)

HSP 1 Score: 120 bits (300), Expect = 7.730e-28
Identity = 80/194 (41.24%), Postives = 99/194 (51.03%), Query Frame = 2
Query:  152 GVDLPYEMLLTLLRYKDWGPEAATALYQSLVAAGKGLLEKVNPGAPVRGMQNGGNT-CYIDSLLFAMFATLDAFDWLLFK-PLPST--DPPEARLLQKHLRFLVNEVRGGATVPREHSNLIRTHLRRCGWQGG-----ASTQEDVTELFTFLVCLLRCPALPLSEALFHGGKVDAGDSRISTERALFLALPEAD 706
            GV   Y  + TLL   +W  + AT   + L+ A +GLL   +    + G +N   T CYIDSLLFAMF     F+ LL   P  ST   P +AR LQ  +R  VN +R G  V       +R  L  CGW+G      A TQED +ELF FL  LL  P LP    LFHG   D  D R+ TER L L++P  D
Sbjct:   65 GVRPEYHQVQTLLGQNNWELKEATEEIKDLLDADEGLLVPFDNRRIMLGAENDEYTSCYIDSLLFAMFIPFSTFEPLLLSTPAVSTFVKPLDARRLQTSIRLFVNRLRSGKLVTTRIVRQLREDLACCGWKGRDPRSRAFTQEDTSELFLFLTELLELPYLPFQIRLFHGANADNDDDRLMTERMLTLSIPTPD 258          
BLAST of mRNA_E-fasciculatus_F_contig11945.1519.1 vs. uniprot
Match: U9T6Q1_RHIID (USP domain-containing protein n=5 Tax=Rhizophagus TaxID=1129544 RepID=U9T6Q1_RHIID)

HSP 1 Score: 117 bits (292), Expect = 6.840e-27
Identity = 70/187 (37.43%), Postives = 91/187 (48.66%), Query Frame = 2
Query:  152 GVDLPYEMLLTLLRYKDWGPEAATALYQSLVAAGKGLLEKVNPGAPVRGMQNGGNT-CYIDSLLFAMFATLDAFDWLLFKPLPSTDPPEARLLQKHLRFLVNEVRGGATVPREHSNLIRTHLRRCGWQG----GASTQEDVTELFTFLVCLLRCPALPLSEALFHGGKVDAGDSRISTERALFLALP 697
            G  L    +  LL    W        +  L  A +G++  +     + G +N   T CYIDS+LF MFA   +FD LLF      +   AR+LQ HLR  VN +R G  +       +R  L  CGW G    G  TQED +E F FL CL   P LPL   LFHG   DA D R+ TER + +++P
Sbjct:   26 GHPLDTSQIEKLLELNAWNVREVAEHFSDLGEAEEGIIVDIQKDIVMLGCENDRMTSCYIDSVLFTMFARTQSFDGLLFV---QAEGVNARVLQTHLRLFVNRLRSGKFINSYMIKQLRECLISCGWIGEDNYGNPTQEDASEFFLFLSCLYELPYLPLGMHLFHGASADANDERVITERLIQVSIP 209          
BLAST of mRNA_E-fasciculatus_F_contig11945.1519.1 vs. uniprot
Match: A0A433PUY0_9FUNG (Ubiquitin carboxyl-terminal hydrolase-domain-containing protein n=1 Tax=Endogone sp. FLAS-F59071 TaxID=2340872 RepID=A0A433PUY0_9FUNG)

HSP 1 Score: 114 bits (285), Expect = 1.440e-25
Identity = 72/190 (37.89%), Postives = 94/190 (49.47%), Query Frame = 2
Query:  152 GVDLPYEMLLTLLRYKDWGPEAATALYQSLVAAGKGLLEKVNPGAPVRGMQNGGNT-CYIDSLLFAMFATLDAFDWLLFKPLPSTDPPEARLLQKHLRFLVNEVRGGATVPREHSNLIRTHLRRCGWQG-----GASTQEDVTELFTFLVCLLRCPALPLSEALFHGGKVDAGDSRISTERALFLALPEA 703
            GV   +  +  LL   DW  + A    + L+ A +GLL   +    + G +N   T CYIDSLLFAMF     F+ LL     + D   AR LQ  +R  +N +R G  V       +R  L RCGW G     G  +QED +ELF FL  L + P LP    LFHG   D  D R+ TER + L++P A
Sbjct:   67 GVRSEHHQVQELLERNDWELKKAIEEVRDLLDADEGLLVAFDREKTMLGAENDEYTSCYIDSLLFAMFVPFSTFEPLLHSSPANLD---ARRLQTSIRLFINRLRSGKLVTTRTVRQLREDLARCGWNGRDLRSGNFSQEDTSELFLFLTDLFQLPYLPFQIKLFHGADADNDDDRLMTERMVTLSIPAA 253          
BLAST of mRNA_E-fasciculatus_F_contig11945.1519.1 vs. uniprot
Match: A0A4P9XS99_9FUNG (Ubiquitin carboxyl-terminal hydrolase-domain-containing protein n=1 Tax=Thamnocephalis sphaerospora TaxID=78915 RepID=A0A4P9XS99_9FUNG)

HSP 1 Score: 114 bits (286), Expect = 1.590e-25
Identity = 73/188 (38.83%), Postives = 100/188 (53.19%), Query Frame = 2
Query:  209 PEAATALYQSLVAAGKGLLEKVNPGAPVRGMQN-GGNTCYIDSLLFAMFATLDAFDWLLFKPLPSTDPPEARLLQKHLRFLVNEVRGGATVPREHSNLIRTHLRRCGWQG---GAS----------------TQEDVTELFTFLVCLLRCPALPLSEALFHGGKVDAGDSRISTERALFLALPEADKE 712
            P+AA    + +  A   +L     G    G++N  G +CYIDSL+FAMFA  D FD LL +P    +P  +R+ Q   R +VN++R G TVPR+    +   L  CGW+G   G++                TQED  ELF FL  LL  P LP    + H G+VD+ D R+ TER L LA+PE ++E
Sbjct:   42 PDAANTADEGMALAKGCVLLPPASGMRTSGIENFNGTSCYIDSLIFAMFACQDGFDALL-QPRKLANPQASRV-QVTCRLMVNQLRSGRTVPRQIVRQLCEDLAACGWRGMDTGSAQPNGRDATLAPQTLKTTQEDAAELFMFLTDLLELPYLPFKMHILHSGRVDSDDDRLITERLLQLAIPEEEEE 227          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig11945.1519.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FS31_ECTSI2.070e-14095.38Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L1X4_9PHAE2.760e-13889.58Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A836CLH8_9STRA5.800e-4652.15Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A261Y7V0_9FUNG2.510e-3343.33USP domain-containing protein n=1 Tax=Bifiguratus ... [more]
A0A397G3K6_9GLOM1.020e-3141.36USP domain-containing protein n=1 Tax=Diversispora... [more]
A0A015LYV1_RHIIW1.420e-2836.32USP domain-containing protein n=8 Tax=Glomeraceae ... [more]
A0A433Q8L8_9FUNG7.730e-2841.24Ubiquitin carboxyl-terminal hydrolase-domain-conta... [more]
U9T6Q1_RHIID6.840e-2737.43USP domain-containing protein n=5 Tax=Rhizophagus ... [more]
A0A433PUY0_9FUNG1.440e-2537.89Ubiquitin carboxyl-terminal hydrolase-domain-conta... [more]
A0A4P9XS99_9FUNG1.590e-2538.83Ubiquitin carboxyl-terminal hydrolase-domain-conta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig11945contigE-fasciculatus_F_contig11945:513..4154 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons5
Model size717
Cds size372
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig11945.1519.1prot_E-fasciculatus_F_contig11945.1519.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalepolypeptideE-fasciculatus_F_contig11945 2046..4154 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927704.18283-UTR-E-fasciculatus_F_contig11945:512..7051622927704.18283-UTR-E-fasciculatus_F_contig11945:512..705Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig11945 513..705 -
1695995657.9345336-UTR-E-fasciculatus_F_contig11945:512..7051695995657.9345336-UTR-E-fasciculatus_F_contig11945:512..705Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig11945 513..705 -
1622927704.1998272-UTR-E-fasciculatus_F_contig11945:1342..14431622927704.1998272-UTR-E-fasciculatus_F_contig11945:1342..1443Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig11945 1343..1443 -
1695995657.9434392-UTR-E-fasciculatus_F_contig11945:1342..14431695995657.9434392-UTR-E-fasciculatus_F_contig11945:1342..1443Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig11945 1343..1443 -
1622927704.21355-UTR-E-fasciculatus_F_contig11945:1996..20451622927704.21355-UTR-E-fasciculatus_F_contig11945:1996..2045Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig11945 1997..2045 -
1695995657.9533362-UTR-E-fasciculatus_F_contig11945:1996..20451695995657.9533362-UTR-E-fasciculatus_F_contig11945:1996..2045Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig11945 1997..2045 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927704.2253993-CDS-E-fasciculatus_F_contig11945:2045..20841622927704.2253993-CDS-E-fasciculatus_F_contig11945:2045..2084Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig11945 2046..2084 -
1695995657.9609067-CDS-E-fasciculatus_F_contig11945:2045..20841695995657.9609067-CDS-E-fasciculatus_F_contig11945:2045..2084Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig11945 2046..2084 -
1622927704.2369258-CDS-E-fasciculatus_F_contig11945:2961..31021622927704.2369258-CDS-E-fasciculatus_F_contig11945:2961..3102Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig11945 2962..3102 -
1695995657.9687939-CDS-E-fasciculatus_F_contig11945:2961..31021695995657.9687939-CDS-E-fasciculatus_F_contig11945:2961..3102Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig11945 2962..3102 -
1622927704.250758-CDS-E-fasciculatus_F_contig11945:3962..41541622927704.250758-CDS-E-fasciculatus_F_contig11945:3962..4154Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig11945 3963..4154 -
1695995657.976699-CDS-E-fasciculatus_F_contig11945:3962..41541695995657.976699-CDS-E-fasciculatus_F_contig11945:3962..4154Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig11945 3963..4154 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-fasciculatus_F_contig11945.1519.1

>prot_E-fasciculatus_F_contig11945.1519.1 ID=prot_E-fasciculatus_F_contig11945.1519.1|Name=mRNA_E-fasciculatus_F_contig11945.1519.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=124bp
GGRQGGWQTGHRGCRKRRRRQGWRGRRGRGAVVTVVGRREGCKGGRAHEL
RSRPAVRDAPHPAEVQGLGSRGGYGAVPEPGGCWEGSAGEGQPGSARSRD
AERRQHLLHRQPAVRHVRHLGRV*
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mRNA from alignment at E-fasciculatus_F_contig11945:513..4154-

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-fasciculatus_F_contig11945.1519.1 ID=mRNA_E-fasciculatus_F_contig11945.1519.1|Name=mRNA_E-fasciculatus_F_contig11945.1519.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=3642bp|location=Sequence derived from alignment at E-fasciculatus_F_contig11945:513..4154- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
GGTGGTCGCCAAGGTGGTTGGCAGACAGGGCATCGGGGGTGCAGGAAGCG CCGGCGGCGGCAAGGGTGGCGGGGGCGGCGAGGGCGGGGTGCTGTCGTCA CCGTTGTCGGACGAAGAGAGGGATGTAAGGGTGGCCGAGCTCATGAGCTT CGGAGTCGACCTGCCGTACGAGATGCTCCTCACCCTGCTGAGGTAGGCTA TGGGTTACGTAAGGGTGTGATGAGGGTGGACCGTGGCGGAGGTGCCGTAC GGTAGGTACATGCATGGCTTACGGGGCGAGGTTCGGGAAAAGAGCGGGGG AGTGAGCTGGAATGGTCGTTTGTTGGCCGCGCGGTTGTCGTCCATACAGC GTGGGGCGAGAGAACGGTGTCGTCGTGCAGACAGCGATGGGTGATACCCA ACGGGGGGGGGGTCTGCGTCTTCACGGGGTTGGATCGTCCTATGCTGTGA AGACAACGTAGGACTAAATTATCTGTTGCCCAGTTCGGTCGTCCATCTGC ATGATGTTGATGTTCTGTTCACCTGCAAGCACATACACAGTGTGATCCAG AGACCCGCAAGCTCGTGGACAAATCGGGTAGATATGGGTTGGGGGATCGA TGGATGGGGTACCGGGGTTGAGTCCCCGAAGTGGGGAGGGCGCTAAGTGG GGGAAACCCCCCGTACCGTCTGTGTCTGCTTGCTCTTTGCAAAGGCTTAA GACTCTCGGATACGGGGGACCCTGCATATCCTTGTCCTTGTCTTTTTACG AGACCCGATATGTTTTCTAAGCACACGTGTGAGGACACACAAACTTCACC CACACCCCCGATGGCAAATCACGCTCGAAACGCGATTTCCAGGCCCGGCA TACTTTCTATTAATAAGCACATATGGTATCACTGAAGGGCACACAAAAAC TGCCCATGCCGCCGATGGCAAATCATGCTCGAAGCACGACTTTCCAGACC CGGGATATTTTCGAAGCACATGGACACACAAAAAAACTGCCCGCATATCT CCGCGCCAAACACGATTTACCACCACTGCTGCTGCGGTTACGACGAAAAA AGGTACAAGGATTGGGGTCCCGAGGCGGCTACGGCGCTGTACCAGAGCCT GGTGGCTGCTGGGAAGGGTCTGCTGGAGAAGGTCAACCCGGGAGCGCCCG TTCGCGGGATGCAGAACGGCGGCAACACTTGTTACATCGACAGGTGCGAG GGGGCATATGTGACGACATGTGAATGTGATGCGATTGGCGGCGGCAGCCT TGACGGCTCGTCGTGATGGGAGAAAGGGTTTATGTTATTGGTGTAGGGGG GGAAGGCTGCCATGACATGCGTAGCGCGTGAATGCGCGATCGGAGCAACG GTTTATTTTTGATTGGCAGGGGGAGGCTGTCATGATGTGCGTAAGGCGTG AGTGCGCGACTGGAGGCGGTCCTGAGGGATAGTTCATCGTGGACTGATGA GGAGGAGAGGGGGTCCACGTGATGGGGGAAGGTGCTCTCGGGAGAGGGCG TCATTGTTGTTCATGGCGTGGGCATTGGAAGTCTCGTCGAGAAGAGTGCC CCCCCCGTGGATGAAGGTGCCGTTGCCTCTGCGGTTTTTACCATGGTATT TGATCGAGTGGTAATTTACCTTGACCGTCTGTCCCGCAGCAGCCGCGGTA TCGGTACCAAACAGCTTTCCTCCCTCCCTCCTACCATCCGTCCTAGTTGT CACCATGCACGGAACACATTGGTTTTGCAGTCGTCACTACTCTCAGCGCT ATTGTACCGCTAGGTCGTCTGTTGCGGTGGATCGAGAGCTTATTGCTGAT ATCGACGTTGTTGTTTCTCACGTTTGCCCAGCCCAGCATATTTTAATTGG TCACGGGCAGGGCAGACACGCAACACGCAGACTCCAAAAAAGGGATCACG TGGACCTAGCACTAGCACTACAACCCCCCCCCCCCCCCCCCCGGTATCAA CCCCCCTCGCACACAGCCAACCGTCGCAATGCCGTTGCTACGAGACTGCC GTGCCACCAACACACACATGGATGCATTCCCCGCTCGCTCGGTTCCCGTC GGTGTTGCCCGTCTGTTCAGCCTGCTGTTCGCCATGTTCGCCACCTTGGA CGCGTTTGATTGGCTGCTGTTCAAGCCGCTGCCGTCCACCGATCCCCCCG AGGCACGTGTGTCTTTTTTTGTTGTTTTTCTTATTATCACGCAAAAAATA TCCATCTCTATCCATAGAAAAGGGTCTAGGATACACTGGCAAAATGAGTT CATGAGCTCATAGCGTTAGCGGGGTGTTAACTCTGTATCTTGCGATTCCC CAAGCAGCATGCAGCAGGGATGTCGTCTTTAATTGTGTGTGTTTGTGTGT TTGTCGGCCGCGTTAGCCGGCTGGCTGGCCCACGAAAGGACGTCAGTCTC AGTGCGACTGAAATCGGAGAACGTTTATTACAGTGGTGTAGCATGATATG ATGATATCTTCTCCTTCCCTTCAGTGGTGTACATGTACAGCAGTAGCATG ATACTTCATGCAATGAGCTAATGCTGATCAATCTTTTGTTTGTCGGGGAA TGCAAGCTATACAAAATACTAGTACATGTAGTTGGATTTCTTGATGCAGC TTTGAATTGTTGCCTCGTTCGAATGAAATCGGTTTCAAGCTGAGACGCAT CTCGGCTCGCATGTCGTGGTTCCTTGGATTTGTGCTGCAACGTAACGACG TTCAGGTGAAGCTGTTGCAGAAGCACCTTCGGTTCCTGGTGAACGAAGTG AGGGGAGGCGCCACGGTTCCGCGGGAACACTCCAACCTCATACGGACACA CCTCAGGAGATGGTGAGCGCGGACAAAAGCCTTGCTGTTGTTGTTGTTGT TGTTGGTGGTGGTGGTGGTGGGGTGCTACTGTGATTGATTGATACTGGTT CAGCGCTTCATCTTTGTTGTGCATTCTACGCACACCTAGTGTATCTTGAA AGTAAGTACTTGTGCTCCACCAAACACTTTTATTTACAACAGGATCCCCC GCACACGCAAAGAACACTAGACACTAGAACACTAGAACACTTGAACACTA TAACACTTGTAGTCTTTTCTGACCGGTATTGTTGTGTCGATAACAATCCT CTCCTTCGCCATCTTGCTCTGAATGACAAGAAAAACAGACAAACGAAAAA AAATCGTGGCTGGCACAGGGGGACCAATTGTTTTGGCAATAGTAACCTCT CTTTTACCAACTTGCTCTGAACGACCTACACACGAAAAAAAAAACAGCAG TGAAGTGAATGGCATGGGGGAGCTAATTGCTTTCACGATAATAACCTACC AGTACCTCTATTTACCATCTTGCTCCGGACGACAGCCTCCCGTCCAAAGA ACCCTTTTCTTTTCGTTTCTTCCTGACCGGTCGCGGACATAACCTAACCT ACCCCTCTTTGGCATCTTGCTCTGAACAATAACGACAACAACAAAAAAGT GGATGGCAGGGTGGAGCGTCCACCCAGGAAGACGTGACGGAGCTATTCAC CTTTCTGGTCTGCCTTCTGCGGTGCCCCGCGCTACCCCTTAGCGAAGCCC TTTTCCACGGGGGGAAAGTTGACGCCGGGGATTCTAGGATTTCGACGGAG CGGGCGCTGTTCCTGGCGCTTCCGGAGGCTGACAAGGAGACC
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Coding sequence (CDS) from alignment at E-fasciculatus_F_contig11945:513..4154-

>mRNA_E-fasciculatus_F_contig11945.1519.1 ID=mRNA_E-fasciculatus_F_contig11945.1519.1|Name=mRNA_E-fasciculatus_F_contig11945.1519.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=744bp|location=Sequence derived from alignment at E-fasciculatus_F_contig11945:513..4154- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
GGTGGTCGCCAAGGTGGTTGGCAGACAGGGCATCGGGGGTGCAGGAAGCG
CCGGCGGCGGCAAGGGTGGCGGGGGCGGCGAGGGCGGGGTGCTGTCGTCA
CCGTTGTCGGACGAAGAGAGGGATGTAAGGGTGGCCGAGCTCATGAGCTT
CGGAGTCGACCTGCCGTACGAGATGCTCCTCACCCTGCTGAGGGTGGTCG
CCAAGGTGGTTGGCAGACAGGGCATCGGGGGTGCAGGAAGCGCCGGCGGC
GGCAAGGGTGGCGGGGGCGGCGAGGGCGGGGTGCTGTCGTCACCGTTGTC
GGACGAAGAGAGGGATGTAAGGGTGGCCGAGCTCATGAGCTTCGGAGTCG
ACCTGCCGTACGAGATGCTCCTCACCCTGCTGAGGTACAAGGATTGGGGT
CCCGAGGCGGCTACGGCGCTGTACCAGAGCCTGGTGGCTGCTGGGAAGGG
TCTGCTGGAGAAGGTCAACCCGGGAGCGCCCGTTCGCGGGATGCAGAACG
GCGGCAACACTTGTTACATCGACAGGTACAAGGATTGGGGTCCCGAGGCG
GCTACGGCGCTGTACCAGAGCCTGGTGGCTGCTGGGAAGGGTCTGCTGGA
GAAGGTCAACCCGGGAGCGCCCGTTCGCGGGATGCAGAACGGCGGCAACA
CTTGTTACATCGACAGCCTGCTGTTCGCCATGTTCGCCACCTTGGACGCG
TTTGACCTGCTGTTCGCCATGTTCGCCACCTTGGACGCGTTTGA
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