prot_E-fasciculatus_F_contig1186.1457.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig1186.1457.1
Unique Nameprot_E-fasciculatus_F_contig1186.1457.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length263
Homology
[Close]
BLAST of mRNA_E-fasciculatus_F_contig1186.1457.1 vs. uniprot
Match: D7FUR2_ECTSI (Light harvesting complex protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FUR2_ECTSI)

HSP 1 Score: 472 bits (1214), Expect = 1.830e-167
Identity = 244/264 (92.42%), Postives = 249/264 (94.32%), Query Frame = 0 
Query:    1 MKSFVAAA-SLCALAPASAFVPGA-LPLAGVRSAPSKLSMAATPERSISIPIDPYPEGLDGEMVGDTGFDPAGFANNPPSWVQGEGTGTAARVKWYREAELAHGRVAMLAAAGWIFPEIYHFPGNSVLGADRFAEMNPLLAYDNIPNAGGIQIVVTILILETIRLNRSIRSDSGVAGDIGLGQGEGRWNPFNFNYTEEDVLTQLRYPAALRTLQEMKHGRTAMIGITGMYFQTLVQGQGILHQLGEAFSTPDSVAKAGYFFNPL 262
            MKSFVAAA SLCALAPASAFVPGA LPLAGVRSAPSKL+MAATPERSISIPIDPYPEGLDGEMVGD GFDPAGFANNPPSWVQGEGTGTAARVKWYREAELAHGRVAMLAAAGWIFPEIYHFPGN+VLG DRFAEMNPLLAYDNIPNAGGIQIVVTILILETIRLNRSIRSDSGVAGDIGLGQGEGRWNPFNFNYTEE+         A + LQE+KHGRTAMIGITGMYFQTLVQGQGILHQLGEAFSTPDSVAKAGYFFNPL
Sbjct:    1 MKSFVAAATSLCALAPASAFVPGASLPLAGVRSAPSKLAMAATPERSISIPIDPYPEGLDGEMVGDVGFDPAGFANNPPSWVQGEGTGTAARVKWYREAELAHGRVAMLAAAGWIFPEIYHFPGNTVLGPDRFAEMNPLLAYDNIPNAGGIQIVVTILILETIRLNRSIRSDSGVAGDIGLGQGEGRWNPFNFNYTEEEY--------AEKQLQEIKHGRTAMIGITGMYFQTLVQGQGILHQLGEAFSTPDSVAKAGYFFNPL 256
[Close]
BLAST of mRNA_E-fasciculatus_F_contig1186.1457.1 vs. uniprot
Match: W7TTD7_9STRA (Light-harvesting protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7TTD7_9STRA)

HSP 1 Score: 238 bits (606), Expect = 1.600e-74
Identity = 128/245 (52.24%), Postives = 161/245 (65.71%), Query Frame = 0 
Query:   16 ASAFVPGALPLAGVRSAPSKLSMAATPERSISIPIDPYPEGLDGEMVGDTGFDPAGFANNPPS-WVQGEGTGTAARVKWYREAELAHGRVAMLAAAGWIFPEIYHFPGNSVLGADRFAEMNPLLAYDNIPNAGGIQIVVTILILETIRLNRSIRSDSGVAGDIGLGQGEGRWNPFNFNYTEEDVLTQLRYPAALRTLQEMKHGRTAMIGITGMYFQTLVQGQGILHQLGEAFSTPDSVAKAGYFF 259
            ASAF+    PLA  R A   + MAA  + S ++P D  P  LDG + GD GFDP GF+NNPP  W+ G   G+   +KWYREAE+ HGRVAMLAA GW+FP IYH PGN  +G D FA +NP  A   +P AG  QI  T+  +E  R+NR IR D   AGD+GLGQGEGRWNPF FNY+EE+         A + LQE+K+GR AM+GI G+  Q  V G+GI+ QLG +F  P++V+KAGY+F
Sbjct:   59 ASAFI-APTPLA--RRATGAVRMAADDDLSTALPFDKRPPNLDGSLPGDVGFDPVGFSNNPPRPWLIG---GSGRSLKWYREAEIVHGRVAMLAALGWVFPNIYHLPGNEDVGVDAFANLNPFGALTTVPAAGLWQIAATVGAIELFRVNRVIRGDKE-AGDLGLGQGEGRWNPFGFNYSEEEY--------AEKQLQEIKNGRLAMVGILGLLLQASVTGKGIVQQLGGSFDVPEAVSKAGYYF 288
[Close]
BLAST of mRNA_E-fasciculatus_F_contig1186.1457.1 vs. uniprot
Match: A0A836CAI0_9STRA (Light harvesting complex protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAI0_9STRA)

HSP 1 Score: 229 bits (585), Expect = 5.250e-72
Identity = 127/256 (49.61%), Postives = 166/256 (64.84%), Query Frame = 0 
Query:    7 AASLCALAPASAFVPGALPLAGVRSAPSKLSMAATPERSISIPIDPYPEGLDGEMVGDTGFDPAGFANNPP-SWVQGEGTGTAARVKWYREAELAHGRVAMLAAAGWIFPEIYHFPGNSVLGADRFAEMNPLLAYDNIPNAGGIQIVVTILILETIRLNRSIRSDSGVAGDIGLGQGEGRWNPFNFNYTEEDVLTQLRYPAALRTLQEMKHGRTAMIGITGMYFQTLVQGQGILHQLGEAFSTPDSVAKAGYFFNP 261
            AA   A+APA+AF+P + P+A  + +  K+      ERS +IP D  PE LDG +VGD GFDPAGF+NNPP +W+ G   G    +KWYREAE+ HGR AMLAA GWI PE  HFPGN  +G D FA+ NP  A  ++P+AG  QI  TI  +E  R+NR +R  +   GD+GLGQG    NPF FNYTEE+  T        + LQE+K+GR AM+ I GM+ Q+ +  +G++ QL  AF+ PD+V KAGY+F P
Sbjct:    5 AALAFAVAPAAAFLPVSAPVAPAQGSVMKM----VSERSTAIPFDKRPENLDGSLVGDVGFDPAGFSNNPPRAWLIG---GEGRSLKWYREAEIVHGRTAMLAALGWIVPEFVHFPGNEQVGVDAFAKTNPWDALYSVPDAGLWQIAATIFAVEVFRINRVVRGGAE-PGDLGLGQGG--LNPFGFNYTEEEYKT--------KQLQELKNGRLAMVAIIGMFLQSAITNEGLIAQLSGAFTFPDAVGKAGYYFPP 242
[Close]
BLAST of mRNA_E-fasciculatus_F_contig1186.1457.1 vs. uniprot
Match: A0A835YWE6_9STRA (Light harvesting complex protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YWE6_9STRA)

HSP 1 Score: 224 bits (572), Expect = 4.420e-70
Identity = 131/262 (50.00%), Postives = 166/262 (63.36%), Query Frame = 0 
Query:    1 MKSFVAAASLCALAPASAFVPGALPLAGVRSAPSKLSMAATPERSISIPIDPYPEGLDGEMVGDTGFDPAGFANNPP-SWVQGEGTGTAARVKWYREAELAHGRVAMLAAAGWIFPEIYHFPGNSVLGADRFAEMNPLLAYDNIPNAGGIQIVVTILILETIRLNRSIRSDSGVAGDIGLGQGEGRWNPFNFNYTEEDVLTQLRYPAALRTLQEMKHGRTAMIGITGMYFQTLVQGQGILHQLGEAFSTPDSVAKAGYFFNP 261
            MK+  A A L A  PA+AFVP   P+A     PSK+ + A  ERS +IP D  PE LDG +VGD GFDPAGF+NNPP +W+ G   G    +KWYREAE+ HGR AMLAA GW+ PE  HFPGN  +G D FA+ NP  A  ++P+AG  QI  TI  +E  R+NR +R D    GD+GLGQG    NPF F+Y+EE            + LQE+K+GR AM+ I GM+ Q  +  QG++ +L  AF+ PD+V KAGYFF P
Sbjct:    1 MKAVAALALLAA--PAAAFVP-VTPVA----TPSKVVLQA--ERSTAIPFDKRPENLDGTLVGDVGFDPAGFSNNPPRAWLIG---GEGRSLKWYREAEIVHGRTAMLAALGWVVPEFVHFPGNEAVGVDAFAKTNPWEALYSVPDAGLWQIAATIFAVEVYRINRVVRGDKE-PGDLGLGQGG--LNPFGFDYSEEQYRE--------KQLQEIKNGRLAMVAIIGMFLQAAINQQGLISELSGAFTFPDAVGKAGYFFPP 239
[Close]
BLAST of mRNA_E-fasciculatus_F_contig1186.1457.1 vs. uniprot
Match: A0A6V1NAG2_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1NAG2_HETAK)

HSP 1 Score: 216 bits (550), Expect = 1.210e-66
Identity = 121/237 (51.05%), Postives = 147/237 (62.03%), Query Frame = 0 
Query:   25 PLAGVRSAPSKLSMAATPERSISIPIDPYPEGLDGEMVGDTGFDPAGFANNPPS-WVQGEGTGTAARVKWYREAELAHGRVAMLAAAGWIFPE-IYHFPGNSVLGADRFAEMNPLLAYDNIPNAGGIQIVVTILILETIRLNRSIRSDSGVAGDIGLGQGEGRWNPFNFNYTEEDVLTQLRYPAALRTLQEMKHGRTAMIGITGMYFQTLVQGQGILHQLGEAFSTPDSVAKAGYFF 259
            PL  V ++ S LSM    ERS ++P+DPYPEGLDG M GD GFDPAGFANNPP  W+ G G  +   + WYREAELAHGRVAMLA  GW FPE  YHFPGN + G D FAE NP+ A    P  G IQI + I  +E  R+   IR D    GD+ LGQ  G  NPF  NY +++          L  ++E+KHGR AM+GI GM FQ    G  +  QLG AF+ P++V  AGY+F
Sbjct:   23 PLKNVATSTSSLSMMQG-ERSKALPMDPYPEGLDGTMAGDVGFDPAGFANNPPKKWLYGGGENS---LDWYREAELAHGRVAMLATVGWFFPETFYHFPGNEIYGQDIFAEANPIKALSVAPAGGLIQIALVIFFVEVWRIKNVIRGDRA-PGDLNLGQ-RGAINPFGLNYDDDEYF--------LMEVREIKHGRLAMLGIMGMIFQQAATGLSLGQQLGGAFTFPEAVKSAGYYF 245
[Close]
BLAST of mRNA_E-fasciculatus_F_contig1186.1457.1 vs. uniprot
Match: A0A0G4ELJ2_VITBC (Uncharacterized protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4ELJ2_VITBC)

HSP 1 Score: 205 bits (521), Expect = 4.040e-62
Identity = 121/252 (48.02%), Postives = 155/252 (61.51%), Query Frame = 0 
Query:    1 MKSFVAAASLCALAPASAFVP-GAL----PLAGVRSAPSKLSMAATPERSISIPIDPYPEGLDGEMVGDTGFDPAGFANN-PPSWVQGEGTGTAARVKWYREAELAHGRVAMLAAAGWIFPEIYHFPGNSVLGADRFAEMNPLLAYDNIPNAGGIQIVVTILILETIRLNRSIRSDSGVAGDIGLGQGEGRWNPFNFNYTEEDVLTQLRYPAALRTLQEMKHGRTAMIGITGMYFQTLVQGQGILHQLGEAF 246
            M   VAA +L A+  A+AFVP G L    PL    + PS   M  + +RS+++P+D  P  LDG + GD GFDP GF+NN P +W+ G   G    +KWYREAEL H RVAMLAA GWIFPEI+H PGN+ +G D FAE NP  A   +P  G  QI  T+  +E  RL R +R +   AGD+GLGQGEGRWNPF F + E++             ++E+K+GR AMI I GM  Q  V G+G+L Q+GE F
Sbjct:    1 MMKVVAAVALLAVC-ANAFVPQGVLKRDSPLRKSLTRPSMAEMGES-DRSLALPMDKRPPNLDGSLPGDFGFDPVGFSNNLPRTWLIG---GDERSLKWYREAELVHSRVAMLAALGWIFPEIWHLPGNAAVGVDAFAETNPWKALTTVPKEGLWQIAGTVSAIEFFRLRRVVRGEKE-AGDLGLGQGEGRWNPFGFAFDEDEYYRM--------QVREIKNGRLAMIAIIGMMLQAAVTGEGLLEQIGEGF 238
[Close]
BLAST of mRNA_E-fasciculatus_F_contig1186.1457.1 vs. uniprot
Match: A0A0G4H236_9ALVE (Uncharacterized protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4H236_9ALVE)

HSP 1 Score: 206 bits (523), Expect = 6.490e-62
Identity = 110/208 (52.88%), Postives = 134/208 (64.42%), Query Frame = 0 
Query:   38 MAATPERSISIPIDPYPEGLDGEMVGDTGFDPAGFANN-PPSWVQGEGTGTAARVKWYREAELAHGRVAMLAAAGWIFPEIYHFPGNSVLGADRFAEMNPLLAYDNIPNAGGIQIVVTILILETIRLNRSIRSDSGVAGDIGLGQGEGRWNPFNFNYTEEDVLTQLRYPAALRTLQEMKHGRTAMIGITGMYFQTLVQGQGILHQLGE 244
            M+   +RSI++P D YP GLDG + GD GFDPAGF NN P  W+ G   G    +KWYREAE+ H RVAMLA  GWIFPEI HF GN+ +G D FAE+NPL A    P AG +QI   I  LE  R+ R I+ D+  AGD+GLGQGEGRWNPF FNY+ E+  T           +E+K+GR AMIGI  M  Q    G+G+L QLG+
Sbjct:   91 MSDNGDRSIALPFDKYPPGLDGTLAGDYGFDPAGFTNNLPRQWLIG---GEERSLKWYREAEITHARVAMLATLGWIFPEIAHFGGNAQVGQDAFAELNPLKAIYTAPAAGLVQIAFGIFALEYFRIKRVIQGDAA-AGDLGLGQGEGRWNPFKFNYSPEEYKTM--------QTREIKNGRLAMIGILAMIAQANASGEGLLTQLGQ 286
[Close]
BLAST of mRNA_E-fasciculatus_F_contig1186.1457.1 vs. uniprot
Match: F0Y1D8_AURAN (Uncharacterized protein LHC9 n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y1D8_AURAN)

HSP 1 Score: 197 bits (501), Expect = 2.570e-59
Identity = 112/237 (47.26%), Postives = 150/237 (63.29%), Query Frame = 0 
Query:   28 GVRSAPSKLSMAATPERSISIPIDPYP---EGLDGEMVGDTGFDPAGFANNPP-SWVQG-EGTGTAARVKWYREAELAHGRVAMLAAAGWIFPEIYHFPGNSVLGADRFAEMNPLLAYDNIPNAGGIQIVVTILILETIRLNRSIRSDSGVAGDIGLGQGEGRWNPFNFNYTEEDVLTQLRYPAALRTLQEMKHGRTAMIGITGMYFQTLVQGQGILHQLGEAFSTPDSVAKAGYFF 259
            G + AP+K +   +     SIP    P     LDG +VGD GFDP GF+   P +W QG EG G+   +K +REAEL HGR+A LA  GWIFPE+YHFPG      D FA+MNP  A D IP+AG +QI+  +  LE +R+NR ++  + + GD+GLGQGEGRWNPF F+YT E+           + LQE+KH R AM+GI G+  ++     G+L QLGE+FS P+ V+KAG++F
Sbjct:   20 GGKKAPAKAAAPVSRGTGPSIPSIALPWTETNLDGSLVGDVGFDPLGFSKYAPGAWWQGDEGDGS---LKIFREAELMHGRIAQLACLGWIFPELYHFPGKD----DAFAKMNPYEAVDAIPSAGWLQILAFMSSLEILRVNR-LKDPAYIPGDLGLGQGEGRWNPFGFDYTAEEYYD--------KQLQEIKHSRLAMLGIAGLAAKSSGTDIGVLQQLGESFSRPEFVSKAGFYF 240
[Close]
BLAST of mRNA_E-fasciculatus_F_contig1186.1457.1 vs. uniprot
Match: A0A7S2UVQ7_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UVQ7_9STRA)

HSP 1 Score: 177 bits (448), Expect = 2.310e-51
Identity = 114/256 (44.53%), Postives = 150/256 (58.59%), Query Frame = 0 
Query:    6 AAASLCALAPASAFVPGALPLAGVRSAPSKLSMAATPERSISIPIDPYPEGLDGEMVGDTGFDPAGFANNPPSWVQGEGTGTAAR-VKWYREAELAHGRVAMLAAAGWIFPEIYHFPGNSVLGADRFAEMNPLLAYDNIPNAGGIQIVVTILILETIRLNRSIRSDSGVAGDIGLGQGEGRWNPFNFNYTEEDVLTQLRYPAALRTLQEMKHGRTAMIGITGMYFQTLVQG-QGILHQLGEAFSTPDSVAKAGYFF 259
            AAA+L   A A AFV  A       S+  + S+A    +SI++P    P GLDG + GD GFDP GF NN P+      +G +AR +KWYREAEL HGR+ MLA  G IFPEIYHFPGN  +G D F+E+N L A+  +P+    QI++    +E  RL  ++  D   AGD+ LGQ  G +NP   N++EE+          L   +E+KH R AMIG  G   Q    G   +L QLGEAF+ P++V+KAGYFF
Sbjct:    5 AAAALILSAGAEAFVAPA-------SSAGRTSVAPLNAKSIALPWQEAPPGLDGTLPGDVGFDPFGFTNNLPTT-----SGPSARSLKWYREAELIHGRICMLATLGVIFPEIYHFPGNEGVGMDVFSELNALKAFYTVPDFAIYQILLFAGAVEIWRLRNTVLGDRP-AGDLNLGQ-FGAYNPAKLNFSEEEYF--------LMQTREIKHCRLAMIGFLGQVLQLRANGGTPLLQQLGEAFTVPEAVSKAGYFF 238
[Close]
BLAST of mRNA_E-fasciculatus_F_contig1186.1457.1 vs. uniprot
Match: A0A7S0FUH9_9STRA (Hypothetical protein n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0FUH9_9STRA)

HSP 1 Score: 174 bits (442), Expect = 2.470e-50
Identity = 103/221 (46.61%), Postives = 130/221 (58.82%), Query Frame = 0 
Query:   45 SISIPIDPYPEGLDGEMVGDTGFDPAGFANNPPS-WVQG-EGT-GTAARVKWYREAELAHGRVAMLAAAGWIFPEIYH-FPGNSVLGADRFAEMNPLLAYDNIPNAGGIQIVVTILILETIRLNRSIRSDSGVA---GDIGLGQGEGRWNPFNFNYTEEDVLTQLRYPAALRTLQEMKHGRTAMIGITGMYFQTLVQGQGILHQLGEAFSTPDSVAKAGYF 258
            S ++P    P  LDG M+GD GFDP GF+  P   W  G EG  G    + WYREAEL HGR+A +A  G+I P ++   PGN   G D ++  NPL A+  +P A  +QI + +  LE  R+N  I  + G A   GD+ +GQGEGRWNPF  +YT E+           + LQE+KH R AMIGI G++ Q    G GI  QLG AFSTPD VAKAGYF
Sbjct:   37 SQALPFATAPATLDGSMLGDAGFDPLGFSTVPVGPWFNGFEGRDGQIGDLSWYREAELIHGRIAQVAVVGFIAPGLFGTLPGNEATGLDAYSNTNPLEAFSQVPGAAILQIFLFMTYLEIKRIN--IIREEGAAYLPGDLRIGQGEGRWNPFGLDYTPEEYDE--------KRLQELKHCRLAMIGIFGLWAQAQASGVGITDQLGAAFSTPDYVAKAGYF 247
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1186.1457.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FUR2_ECTSI1.830e-16792.42Light harvesting complex protein n=2 Tax=Ectocarpu... [more]
W7TTD7_9STRA1.600e-7452.24Light-harvesting protein n=3 Tax=Monodopsidaceae T... [more]
A0A836CAI0_9STRA5.250e-7249.61Light harvesting complex protein n=1 Tax=Tribonema... [more]
A0A835YWE6_9STRA4.420e-7050.00Light harvesting complex protein n=1 Tax=Tribonema... [more]
A0A6V1NAG2_HETAK1.210e-6651.05Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A0G4ELJ2_VITBC4.040e-6248.02Uncharacterized protein n=2 Tax=Vitrella brassicaf... [more]
A0A0G4H236_9ALVE6.490e-6252.88Uncharacterized protein n=1 Tax=Chromera velia CCM... [more]
F0Y1D8_AURAN2.570e-5947.26Uncharacterized protein LHC9 n=1 Tax=Aureococcus a... [more]
A0A7S2UVQ7_9STRA2.310e-5144.53Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S0FUH9_9STRA2.470e-5046.61Hypothetical protein n=1 Tax=Minutocellus polymorp... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR022796Chlorophyll A-B binding proteinPFAMPF00504Chloroa_b-bindcoord: 54..231
e-value: 7.2E-31
score: 107.9
IPR023329Chlorophyll a/b binding domain superfamilyGENE3D1.10.3460.10coord: 41..257
e-value: 6.2E-44
score: 152.0
IPR001344Chlorophyll A-B binding protein, plantPANTHERPTHR21649CHLOROPHYLL A/B BINDING PROTEINcoord: 33..250
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..13
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 14..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..18
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 19..262
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..18
score: 0.72
NoneNo IPR availableSUPERFAMILY103511Chlorophyll a-b binding proteincoord: 38..251
NoneNo IPR availableTMHMMTMhelixcoord: 7..29

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig1186contigE-fasciculatus_F_contig1186:1810..5105 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig1186.1457.1mRNA_E-fasciculatus_F_contig1186.1457.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig1186 1810..5105 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig1186.1457.1 ID=prot_E-fasciculatus_F_contig1186.1457.1|Name=mRNA_E-fasciculatus_F_contig1186.1457.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=263bp
MKSFVAAASLCALAPASAFVPGALPLAGVRSAPSKLSMAATPERSISIPI
DPYPEGLDGEMVGDTGFDPAGFANNPPSWVQGEGTGTAARVKWYREAELA
HGRVAMLAAAGWIFPEIYHFPGNSVLGADRFAEMNPLLAYDNIPNAGGIQ
IVVTILILETIRLNRSIRSDSGVAGDIGLGQGEGRWNPFNFNYTEEDVLT
QLRYPAALRTLQEMKHGRTAMIGITGMYFQTLVQGQGILHQLGEAFSTPD
SVAKAGYFFNPL*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001344Chloro_AB-bd_pln
IPR023329Chlorophyll_a/b-bd_dom_sf
IPR022796Chloroa_b-bind