prot_E-fasciculatus_F_contig11738.1374.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig11738.1374.1
Unique Nameprot_E-fasciculatus_F_contig11738.1374.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length77
Homology
BLAST of mRNA_E-fasciculatus_F_contig11738.1374.1 vs. uniprot
Match: D8LHD8_ECTSI (Eukaryotic translation initiation factor 2B beta subunit n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LHD8_ECTSI)

HSP 1 Score: 159 bits (402), Expect = 4.030e-45
Identity = 73/76 (96.05%), Postives = 76/76 (100.00%), Query Frame = 0
Query:    2 QLCPLFPHDQDTFNCLLSPAAVMSYKDKDSMKNVEVLNPAYDYIPPNLVDLYITNMGGLQPSYIYRLLAEYYHRDD 77
            +LCPLFPHDQDTFNCLLSPAAVMS+KDKDSM+NVEVLNPAYDYIPPNLVDLYITNMGGLQPSYIYRLLAEYYHRDD
Sbjct:  388 KLCPLFPHDQDTFNCLLSPAAVMSFKDKDSMRNVEVLNPAYDYIPPNLVDLYITNMGGLQPSYIYRLLAEYYHRDD 463          
BLAST of mRNA_E-fasciculatus_F_contig11738.1374.1 vs. uniprot
Match: A0A836CBW3_9STRA (Eukaryotic translation initiation factor 2B beta subunit n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBW3_9STRA)

HSP 1 Score: 135 bits (339), Expect = 1.910e-36
Identity = 59/76 (77.63%), Postives = 70/76 (92.11%), Query Frame = 0
Query:    2 QLCPLFPHDQDTFNCLLSPAAVMSYKDKDSMKNVEVLNPAYDYIPPNLVDLYITNMGGLQPSYIYRLLAEYYHRDD 77
            +LCPLFPHDQDTFNCLL+P+AV+ Y+D +  +++EVLNPAYDYIPP LVDLY+TN+GG QPSYIYRLLAEYYHRDD
Sbjct:  313 KLCPLFPHDQDTFNCLLAPSAVLPYEDTELAESIEVLNPAYDYIPPELVDLYMTNIGGHQPSYIYRLLAEYYHRDD 388          
BLAST of mRNA_E-fasciculatus_F_contig11738.1374.1 vs. uniprot
Match: A0A7S3XZZ5_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XZZ5_HETAK)

HSP 1 Score: 121 bits (304), Expect = 1.290e-32
Identity = 54/76 (71.05%), Postives = 65/76 (85.53%), Query Frame = 0
Query:    2 QLCPLFPHDQDTFNCLLSPAAVMSYKDKDSMKNVEVLNPAYDYIPPNLVDLYITNMGGLQPSYIYRLLAEYYHRDD 77
            +LCPL+PH+ D FN LLSP AV+ Y++  ++ +VEVLNPAYDYIPP L+DLYITNMGG QPSYIYRLLAEYYH +D
Sbjct:  160 KLCPLYPHNLDYFNTLLSPGAVLDYEEMATLDDVEVLNPAYDYIPPELIDLYITNMGGHQPSYIYRLLAEYYHHED 235          
BLAST of mRNA_E-fasciculatus_F_contig11738.1374.1 vs. uniprot
Match: A0A7S2DRQ5_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DRQ5_9STRA)

HSP 1 Score: 103 bits (256), Expect = 1.600e-26
Identity = 48/80 (60.00%), Postives = 61/80 (76.25%), Query Frame = 0
Query:    2 QLCPLFPHDQDTFNCLLSPAAVMSYKDKDSM----KNVEVLNPAYDYIPPNLVDLYITNMGGLQPSYIYRLLAEYYHRDD 77
            +LCPL+PHD + FN L SPA+V+SY D  +     ++ EVLNPAYD++PP L+ LY+TN GG QPSYIYRLLAE+YH  D
Sbjct:   53 KLCPLYPHDLNAFNELRSPASVLSYFDTTNRTRLREDAEVLNPAYDFVPPELIALYVTNNGGYQPSYIYRLLAEFYHPSD 132          
BLAST of mRNA_E-fasciculatus_F_contig11738.1374.1 vs. uniprot
Match: A0A7S2XMS8_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XMS8_9STRA)

HSP 1 Score: 105 bits (261), Expect = 4.480e-26
Identity = 47/79 (59.49%), Postives = 63/79 (79.75%), Query Frame = 0
Query:    2 QLCPLFPHD-QDTFNCLLSPAAVMSYKDK--DSMKNVEVLNPAYDYIPPNLVDLYITNMGGLQPSYIYRLLAEYYHRDD 77
            +LCP++PH+ QDT N L+SP++V+ Y +   D M  VE +NP +DYIPP L++LY+TN+GG QPSY+YRLLAEYYH DD
Sbjct:  172 KLCPMYPHEGQDTLNDLVSPSSVVDYSEMSDDLMSKVEFVNPIHDYIPPQLINLYVTNIGGFQPSYLYRLLAEYYHSDD 250          
BLAST of mRNA_E-fasciculatus_F_contig11738.1374.1 vs. uniprot
Match: A0A7S2LE62_9STRA (Hypothetical protein n=2 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2LE62_9STRA)

HSP 1 Score: 104 bits (260), Expect = 9.880e-25
Identity = 49/77 (63.64%), Postives = 64/77 (83.12%), Query Frame = 0
Query:    2 QLCPLFPHD-QDTFNCLLSPAAVMSYKDKDSMKNVEVLNPAYDYIPPNLVDLYITNMGGLQPSYIYRLLAEYYHRDD 77
            +LCP+FPH+ QDT N L+SP++V++ +D +  +NVE +NP +DYIPP LV+LYITN+G  QPSYIYRLLAEYYH DD
Sbjct:  377 KLCPVFPHEGQDTLNDLISPSSVVNIEDSE-YENVEFVNPVHDYIPPQLVELYITNVGCFQPSYIYRLLAEYYHMDD 452          
BLAST of mRNA_E-fasciculatus_F_contig11738.1374.1 vs. uniprot
Match: A0A7S2GLW7_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GLW7_9STRA)

HSP 1 Score: 103 bits (256), Expect = 1.700e-24
Identity = 48/80 (60.00%), Postives = 61/80 (76.25%), Query Frame = 0
Query:    2 QLCPLFPHDQDTFNCLLSPAAVMSYKDKDSM----KNVEVLNPAYDYIPPNLVDLYITNMGGLQPSYIYRLLAEYYHRDD 77
            +LCPL+PHD + FN L SPA+V+SY D  +     ++ EVLNPAYD++PP L+ LY+TN GG QPSYIYRLLAE+YH  D
Sbjct:  285 KLCPLYPHDLNAFNELRSPASVLSYFDTTNRTRLREDAEVLNPAYDFVPPELIALYVTNNGGYQPSYIYRLLAEFYHPSD 364          
BLAST of mRNA_E-fasciculatus_F_contig11738.1374.1 vs. uniprot
Match: W7TWQ5_9STRA (Translation initiation factor eif-2b subunit beta n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TWQ5_9STRA)

HSP 1 Score: 101 bits (251), Expect = 7.740e-24
Identity = 45/76 (59.21%), Postives = 55/76 (72.37%), Query Frame = 0
Query:    2 QLCPLFPHDQDTFNCLLSPAAVMSYKDKDSMKNVEVLNPAYDYIPPNLVDLYITNMGGLQPSYIYRLLAEYYHRDD 77
            +L P++ HDQD FN L SP+A++ Y D   +   + LNPAYDY+PP LVDLYITN GG Q  Y+YRLL EYYH DD
Sbjct:  283 KLSPVYRHDQDAFNDLRSPSALIEYADTQLLPEADFLNPAYDYVPPELVDLYITNTGGHQTFYLYRLLGEYYHHDD 358          
BLAST of mRNA_E-fasciculatus_F_contig11738.1374.1 vs. uniprot
Match: A0A8K1FND4_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FND4_PYTOL)

HSP 1 Score: 101 bits (251), Expect = 8.030e-24
Identity = 46/77 (59.74%), Postives = 60/77 (77.92%), Query Frame = 0
Query:    1 LQLCPLFPHDQDTFNCLLSPAAVMSYKDKDSMKNVEVLNPAYDYIPPNLVDLYITNMGGLQPSYIYRLLAEYYHRDD 77
            ++LCPL+ HD D  N L++P+ + +Y+  D+++N+EVLNPAYDY+PP LV LYITN G  QPSYIYRLLAEYY   D
Sbjct:  287 IKLCPLYAHDLDVLNELVAPSTIYNYE--DTVENLEVLNPAYDYVPPELVSLYITNTGAHQPSYIYRLLAEYYSPQD 361          
BLAST of mRNA_E-fasciculatus_F_contig11738.1374.1 vs. uniprot
Match: B8C5F6_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C5F6_THAPS)

HSP 1 Score: 102 bits (253), Expect = 1.100e-23
Identity = 47/79 (59.49%), Postives = 61/79 (77.22%), Query Frame = 0
Query:    2 QLCPLFPHD-QDTFNCLLSPAAVM--SYKDKDSMKNVEVLNPAYDYIPPNLVDLYITNMGGLQPSYIYRLLAEYYHRDD 77
            +LCP++PH+ QDT N L+SP++V+  S      +  VE +NP +DYIPP L+DLY+TN+GG QPSYIYRLLAEYYH DD
Sbjct:  398 KLCPMYPHEGQDTLNDLISPSSVVDGSLMSDPVLSEVEFVNPVHDYIPPQLIDLYVTNIGGFQPSYIYRLLAEYYHSDD 476          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig11738.1374.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LHD8_ECTSI4.030e-4596.05Eukaryotic translation initiation factor 2B beta s... [more]
A0A836CBW3_9STRA1.910e-3677.63Eukaryotic translation initiation factor 2B beta s... [more]
A0A7S3XZZ5_HETAK1.290e-3271.05Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S2DRQ5_9STRA1.600e-2660.00Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S2XMS8_9STRA4.480e-2659.49Hypothetical protein n=1 Tax=Attheya septentrional... [more]
A0A7S2LE62_9STRA9.880e-2563.64Hypothetical protein n=2 Tax=Leptocylindrus danicu... [more]
A0A7S2GLW7_9STRA1.700e-2460.00Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
W7TWQ5_9STRA7.740e-2459.21Translation initiation factor eif-2b subunit beta ... [more]
A0A8K1FND4_PYTOL8.030e-2459.74Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
B8C5F6_THAPS1.100e-2359.49Uncharacterized protein n=1 Tax=Thalassiosira pseu... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000649Initiation factor 2B-relatedPFAMPF01008IF-2Bcoord: 3..62
e-value: 1.3E-11
score: 44.2
IPR042529Initiation factor 2B-like, C-terminalGENE3D3.40.50.10470coord: 1..73
e-value: 2.2E-23
score: 84.7
NoneNo IPR availablePANTHERPTHR45859:SF1TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT BETAcoord: 2..77
NoneNo IPR availablePANTHERPTHR45859FAMILY NOT NAMEDcoord: 2..77
IPR037171NagB/RpiA transferase-likeSUPERFAMILY100950NagB/RpiA/CoA transferase-likecoord: 3..77

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig11738contigE-fasciculatus_F_contig11738:3535..4173 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig11738.1374.1mRNA_E-fasciculatus_F_contig11738.1374.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig11738 3535..4173 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig11738.1374.1 ID=prot_E-fasciculatus_F_contig11738.1374.1|Name=mRNA_E-fasciculatus_F_contig11738.1374.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=77bp
LQLCPLFPHDQDTFNCLLSPAAVMSYKDKDSMKNVEVLNPAYDYIPPNLV
DLYITNMGGLQPSYIYRLLAEYYHRDD
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR037171NagB/RpiA_transferase-like
IPR042529IF_2B-like_C
IPR000649IF-2B-related