mRNA_E-fasciculatus_F_contig10098.106.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
You are viewing an mRNA, more information available on the corresponding polypeptide page
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig10098.106.1 vs. uniprot
Match: D8LNI5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNI5_ECTSI) HSP 1 Score: 73.6 bits (179), Expect = 3.020e-14 Identity = 43/48 (89.58%), Postives = 43/48 (89.58%), Query Frame = 1 Query: 1 MLLVRGLSLLAVGLAAAPTGCALVSPTPLPRTTAGGHSAAAAAARSKH 144
MLLVRGLSLLAVGLAAAPTGCALV PTPLPRTTAGGH AAA AR KH
Sbjct: 1 MLLVRGLSLLAVGLAAAPTGCALVPPTPLPRTTAGGH--AAATARGKH 46 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig10098.106.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 1 ZOOMx 1POSITION0
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig10098.106.1 >prot_E-fasciculatus_F_contig10098.106.1 ID=prot_E-fasciculatus_F_contig10098.106.1|Name=mRNA_E-fasciculatus_F_contig10098.106.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=48bp MLLVRGLSLLAVGLAAAPTGCALVSPTPLPRTTAGGHSAAAAAARSKHback to top mRNA from alignment at E-fasciculatus_F_contig10098:2361..2504+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig10098.106.1 ID=mRNA_E-fasciculatus_F_contig10098.106.1|Name=mRNA_E-fasciculatus_F_contig10098.106.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=144bp|location=Sequence derived from alignment at E-fasciculatus_F_contig10098:2361..2504+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig10098:2361..2504+ >mRNA_E-fasciculatus_F_contig10098.106.1 ID=mRNA_E-fasciculatus_F_contig10098.106.1|Name=mRNA_E-fasciculatus_F_contig10098.106.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=288bp|location=Sequence derived from alignment at E-fasciculatus_F_contig10098:2361..2504+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |