mRNA_E-fasciculatus_F_contig10097.104.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Properties


Property Name	Value
Hectar predicted targeting category	other localisation
Ec32 ortholog description	Hypothetical protein
Ec32 ortholog	Ec-14_002140.1
Exons	2
Model size	237
Cds size	237
Stop	0
Start	1

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at E-fasciculatus_F_contig10097:2592..4282+
coding sequence from alignment at E-fasciculatus_F_contig10097:2592..4282+

protein sequence of mRNA_E-fasciculatus_F_contig10097.104.1

>prot_E-fasciculatus_F_contig10097.104.1 ID=prot_E-fasciculatus_F_contig10097.104.1|Name=mRNA_E-fasciculatus_F_contig10097.104.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=79bp
MAPHTTDNAQKKKHKSDEKLKHQQEQPAAAVVLNLRAGEEITGLTRDEMA
SVGSVPIKPNPTTYGNSRWVRGARRRMSG

mRNA from alignment at E-fasciculatus_F_contig10097:2592..4282+

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_E-fasciculatus_F_contig10097.104.1 ID=mRNA_E-fasciculatus_F_contig10097.104.1|Name=mRNA_E-fasciculatus_F_contig10097.104.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=1691bp|location=Sequence derived from alignment at E-fasciculatus_F_contig10097:2592..4282+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
ATGGCCCCCCACACCACGGACAACGCCCAGAAGAAGAAGCACAAGAGCGA
CGAAAAGTTGAAGCATCAGCAGGAGCAGCCGGCGGCGGCCGTGGTTCTCA
ACCTCCGGGCAGGCGAGGAGATCACGGGGCTCACCAGGGACGAGATGGCC
TCCGTGTGCGACAAGCTCGAGCAGTTCGCGAAGAAGAACCCGCACCGCGT
GGAGGAGCACGCCTCGGGGGGTGGCGGCGGCGGCGGTGGCGGCCAGGAGA
GGCGGAAGCAGAAGAGCTGTGCGTGAATCCCCGCAACATAATCTGCACAC
ACAAGGTGAGAGCAACATACAAACATCATCAGTCGTCTACCTTCTGTTTG
GTTGTGGGCAAAGGTCGGGTTTGCACATATCCCCGCAGCGCATGGAAGTT
ACCCTGCCATGGTGCTCCCAGCGAACCCAGGAGCATCTCCAACAGCAGCA
GTAGCACAGAGTAGCGATCTTTTTTGGCCAAGTTCCGACTTGGATATGCA
GGTCCGCGAAGAACTCTGTTTTTTCGGGAGTTTCTCCGCTCCTGTTTGAC
TAGTCTTGTACAGCGTTCGCATACACACAAAGGGTCGGAATACTACATAG
TACATGCAGTAGTGCTGCTCTAATTTGGATATGAGGGCAAGGCCATTACA
ACATTGTAAGAATGATGCGCAGTCATCTTGCTCTCTCTCTCTCTCTCAAA
TCTTGACGTAACCCGGAGGCCTCGAACAAATCTCAGCCCTGTCATGTAGG
TGTGTTTTATGTGTGTGACCATCACAGAGGACCATGGCACATTATTGTCA
ACCTTTTGTATTTGTGTTGCAACAGGGACGGAACCCCGTATGTCTCCAAC
ACTATGTACTACCCCCCGTGTATGCTACAAATGGCATCTGTGCGAACCAA
AGAACGTGCCGACGGCGAGTGTTTGTGAAATGTGAAAAGCCGTTTTGTTT
CTGCGCAAAAGCAGAACGGCGCCCTTGGCCACATGCACCATGTGTCACGT
GTCCACGTGCCTGTTTGGACCATGCGGATATTCTGCATCTGTTTAGAACA
ACTACCCGTGTACCAAGATGCTCCCCTCTAGGTGCCTTTTTAACGTGAGA
TAACAACAACAACATTATCCCCCTCCATTCCTCGAACAGTCGCATGGAAG
TTTCTGTTCAGGGAAGATTAAGAACGATGAATTTTGCGCTTGCTATTACG
AACACTTCCAAGCAGCTCAAGCAGCTGGCATGCAACGCTGCCGCCCGGGC
AAGGTCAACCACTACAGCTACATATGCACAGTAGCACAGACACCCTTCCG
ACATCTAAAAAGCTCTTTTTCCGACAGCATTTCCACGCGTCTCCGACGGT
TCTGTTCTTACAACAGTTGGAGTTTATTCGTTTGAATTCTCTTTCGAATC
GAAGCTTTTTCAAAAATCGGCGGCGACGTTGCGTCGGCGCAAGTGTGTAA
ACAACAACCAGTTTCTACGAAAATTGGTGCAAGACAAAAAATGAAGGGAA
AGATTAAGACCGACGAGTGCCGCTAAAACCAGTGCCCACACACAGCAGTG
TTGTACGTTGTGGCGCTCGTTTATGTCCGTTTCTCCGCCGCTCTCCGTCC
CACTCAGGTCGGTTCTGTGCCCATCAAGCCGAACCCTACTACCTACGGCA
ACAGCAGGTGGGTGAGAGGAGCGAGGCGACGCATGTCGGGG

Coding sequence (CDS) from alignment at E-fasciculatus_F_contig10097:2592..4282+

>mRNA_E-fasciculatus_F_contig10097.104.1 ID=mRNA_E-fasciculatus_F_contig10097.104.1|Name=mRNA_E-fasciculatus_F_contig10097.104.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=474bp|location=Sequence derived from alignment at E-fasciculatus_F_contig10097:2592..4282+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
ATGGCCCCCCACACCACGGACAACGCCCAGAAGAAGAAGCACAAGAGCGA
CGAAAAGTTGAAGCATCAGCAGGAGCAGCCGGCGGCGGCCGTGGTTCTCA
ACCTCCGGGCAGGCGAGGAGATCACGGGGCTCACCAGGGACGAGATGGCC
TCCATGGCCCCCCACACCACGGACAACGCCCAGAAGAAGAAGCACAAGAG
CGACGAAAAGTTGAAGCATCAGCAGGAGCAGCCGGCGGCGGCCGTGGTTC
TCAACCTCCGGGCAGGCGAGGAGATCACGGGGCTCACCAGGGACGAGATG
GCCTCCGTCGGTTCTGTGCCCATCAAGCCGAACCCTACTACCTACGGCAA
CAGCAGGTGGGTGAGAGGAGCGAGGCGACGCATGTCGGGGGTCGGTTCTG
TGCCCATCAAGCCGAACCCTACTACCTACGGCAACAGCAGGTGGGTGAGA
GGAGCGAGGCGACGCATGTCGGGG

mRNA_E-fasciculatus_F_contig10097.104.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

ZOOM

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POSITION

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