Homology
BLAST of mRNA_E-fasciculatus_F_contig10093.99.1 vs. uniprot
Match:
D7FX21_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX21_ECTSI)
HSP 1 Score: 373 bits (958), Expect = 1.810e-119
Identity = 203/250 (81.20%), Postives = 207/250 (82.80%), Query Frame = 1
Query: 1 NIAPQLIGKQGQTINKLMKESRAKIVVKPYPDRSGNDVVITGTPNAVKTAKRLVEEFYRSKGCQPTALPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVVVEDGAWGGELRQLLRVAGCEHHLERFREDQLDGEVLLMMDRRDFARMGVTEGEQIRILNALKGG----VDDSDEDSDGLDPDHPDTCKICLDALVDILFLPCAHQCTCSRCGSAYEGKPCILCRRVVDKVQRVIKLRG 738
NIAPQLIGKQGQT+NKLMK+SRAKIVVKPYPDRSGNDV+ITGTPNAVKTAKRLVEEFYRSKGCQP+ALP XXXXXXXXXX VVVEDGAWGGELRQLLRVAGCEHHLERFREDQLDGEVLLMMDRRDF RMGVTEGEQIRILNALKG DSDGLDPDHPDTCKICLDALVDILFLPCAHQCTCSRCGSAYEGKPCILCRRVVDKVQRVIKLRG
Sbjct: 774 NIAPQLIGKQGQTVNKLMKDSRAKIVVKPYPDRSGNDVIITGTPNAVKTAKRLVEEFYRSKGCQPSALPPPSSAVAARKAEGARARPAQPVTGGPXXXXXXXXXX-----VVVEDGAWGGELRQLLRVAGCEHHLERFREDQLDGEVLLMMDRRDFERMGVTEGEQIRILNALKGSGGXXXXXXXXDSDGLDPDHPDTCKICLDALVDILFLPCAHQCTCSRCGSAYEGKPCILCRRVVDKVQRVIKLRG 1018
BLAST of mRNA_E-fasciculatus_F_contig10093.99.1 vs. uniprot
Match:
A0A6H5JKP4_9PHAE (RING-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKP4_9PHAE)
HSP 1 Score: 351 bits (901), Expect = 1.590e-118
Identity = 208/313 (66.45%), Postives = 212/313 (67.73%), Query Frame = 1
Query: 1 NIAPQLIGKQGQTINKLMKESRAKIVVKPYPDRSGNDVVITGTPNAVKTAK---------------------------------------------------------------RLVEEFYRSKGCQPTALPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVVVEDGAWGGELRQLLRVAGCEHHLERFREDQLDGEVLLMMDRRDFARMGVTEGEQIRILNALKG----GVDDSDEDSDGLDPDHPDTCKICLDALVDILFLPCAHQCTCSRCGSAYEGKPCILCRRVVDKVQRVIKLRG 738
NIAPQLIGKQGQT++KLMKESRAKIVVKPYPDRSGNDVVITGTPNAVK +K R+ EEFYRSKGCQPTALP XXXXXXXXXXXX VVVEDGAWGGELRQLLRVAGCEHHLERFREDQLDGEVLLMMDRRDF RMGVT GEQIRILNALKG GVDDSDEDSDGLDPDHPDTCKICLDALVDILFLPCAH CTCSRCGSAYEGKPCILCRRVVDKVQRVIKLRG
Sbjct: 52 NIAPQLIGKQGQTVSKLMKESRAKIVVKPYPDRSGNDVVITGTPNAVKVSKSRVLGSTLDCCRGCVRVRCLAIPLYFQAVVVGRCDGVGAGCFVVVVNALSLRHPLQCTRRVTMRVEEEFYRSKGCQPTALPPPSSAVAAARKAEGARARPAQPVTGXXXXXXXXXXXX----VVVEDGAWGGELRQLLRVAGCEHHLERFREDQLDGEVLLMMDRRDFERMGVTVGEQIRILNALKGSGAGGVDDSDEDSDGLDPDHPDTCKICLDALVDILFLPCAHHCTCSRCGSAYEGKPCILCRRVVDKVQRVIKLRG 360
BLAST of mRNA_E-fasciculatus_F_contig10093.99.1 vs. uniprot
Match:
A0A6H5J8V2_9PHAE (RING-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J8V2_9PHAE)
HSP 1 Score: 236 bits (601), Expect = 7.400e-68
Identity = 164/335 (48.96%), Postives = 185/335 (55.22%), Query Frame = 1
Query: 4 IAPQLIGKQGQTINKLMKESRAKIVVKPYPDRSGNDVVITGTPNAVKTAKRLVEEFYRSKGCQPTALPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-----------------------------------VVVEDGAW----------GGELRQLLRVAGCEHHLERFREDQLDGEVLLMMDRRDFARMGVTEGEQIRILNALK------------------------------------GGV--------DDSDED--SDGLDPDHPDTCKICLDALVDILFLPCAHQCTCSRCGSAYEGKPCILCRRVVDKVQRVIKLR 735
IA Q+IG+ GQT+N+LMKESRA+IV+KPY D++G+DVVITG+P A TA+RLVE+FYRSKG +PT LP XXXXXXXXXXXXX VV G GGEL QLLR A CEHHLERF DQLDGEVLL M+RRDF RMGVTE EQ RIL+ALK GGV DD DED SDGLDPDHPDTCKIC+DALV ILFLPCAHQCTC RCGS + GKPCI+CR+ V + Q VI+LR
Sbjct: 741 IAGQVIGRGGQTVNRLMKESRARIVLKPYADKTGHDVVITGSPQA--TARRLVEDFYRSKGIEPTHLPPXXXXXXXXXXXXXGRPGGVAPRARLPDPMMPTEAMIGHLGRGRTMAVAGPAAAAAAGMRAPSGAIPQGARPVAQPVVYGGGXXXXXXXXVDVSGGELPQLLRAARCEHHLERFLRDQLDGEVLLEMERRDFDRMGVTEAEQSRILSALKHAGEGXXXXXXXXXXXXXGRRENLAQRVVTVVRGTSGGVATPFEVEDDDVDEDXDSDGLDPDHPDTCKICMDALVGILFLPCAHQCTCVRCGSGFVGKPCIICRQKVTRAQPVIRLR 1073
BLAST of mRNA_E-fasciculatus_F_contig10093.99.1 vs. uniprot
Match:
D7FX18_ECTSI (KH domain containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX18_ECTSI)
HSP 1 Score: 155 bits (392), Expect = 1.520e-39
Identity = 125/300 (41.67%), Postives = 148/300 (49.33%), Query Frame = 1
Query: 4 IAPQLIGKQGQTINKLMKESRAKIVVKPYPDRSGNDVVITGTPNAVKTAKRLVEEFYRSKGCQPTALPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXV----------------------VVEDGA------------WGG---------------ELRQLLRVAGCEHHLERFREDQLDGEVLLMMDRRDFARMGVTEGEQIRILNALKGGVDDSD-----------------------------------------ED------SDGLDPDHPDTCKICLDALVDI 615
IA Q+IG+ GQT+N+LMKESRA+IV+K Y D++G+DVVITG+P AV T +RLVE+FYRSKG +PT L XXXXXXXXXXXXX + + GA +GG EL QLLR A CEHHLERF+ DQLDGEVLL M+RR+F RMGVTE EQ RI++ALK D ED SDGLDPDHPDTCKIC+DALV +
Sbjct: 595 IAGQVIGRGGQTVNRLMKESRARIVLKTYADKTGHDVVITGSPQAVLTGRRLVEDFYRSKGIEPTLLQPPSXXXXXXXXXXXXXGRPGGVAPRARLPDPMMPTEAMIGHLGRGRTMAGAGPAAAVGMRAPSGAIPQGARPVAQXXXXXXMFGGXXXXXXXXXVDVSGVELPQLLRAARCEHHLERFKRDQLDGEVLLEMERREFDRMGVTEAEQGRIMSALKHAGDGXXXXXXXXXXXXXXXXXXRENSAQRVAAVVRGASGVMATPVEVEDXXXXXXSDGLDPDHPDTCKICMDALVGL 894
BLAST of mRNA_E-fasciculatus_F_contig10093.99.1 vs. uniprot
Match:
F6PS87_CIOIN (RING-type domain-containing protein n=2 Tax=Ciona intestinalis TaxID=7719 RepID=F6PS87_CIOIN)
HSP 1 Score: 57.8 bits (138), Expect = 5.640e-6
Identity = 30/98 (30.61%), Postives = 46/98 (46.94%), Query Frame = 1
Query: 499 IRILNALKGGVDDSDEDSDGLDPDHPDT---------------------------CKICLDALVDILFLPCAHQCTCSRCGSAYEGKPCILCRRVVDK 711
+ I++A+ G D SD++ ++ D P T CK+CLD + DI+F+PC H CTC C SA C +CR+ ++K
Sbjct: 614 VSIIDAMNDGTDSSDDE---MEADEPQTQTPMSISDLDLSPSMLARVAELEEERKCKVCLDKMADIVFIPCGHLCTCIECASALNK--CPICRKRIEK 706
BLAST of mRNA_E-fasciculatus_F_contig10093.99.1 vs. uniprot
Match:
A0A8B8ADR3_CRAVI (death-associated inhibitor of apoptosis 2-like n=1 Tax=Crassostrea virginica TaxID=6565 RepID=A0A8B8ADR3_CRAVI)
HSP 1 Score: 56.2 bits (134), Expect = 1.330e-5
Identity = 25/49 (51.02%), Postives = 32/49 (65.31%), Query Frame = 1
Query: 583 CKICLDALVDILFLPCAHQCTCSRCGSAYEGKPCILCRRVVDKVQRVIK 729
CKIC+DA +DILFLPC H CTC C A + + C +C+ + QRV K
Sbjct: 305 CKICMDAEMDILFLPCGHLCTCRTC--AIKLRECPVCKERIQNQQRVYK 351
BLAST of mRNA_E-fasciculatus_F_contig10093.99.1 vs. uniprot
Match:
F6PRR9_CIOIN (RING-type domain-containing protein n=1 Tax=Ciona intestinalis TaxID=7719 RepID=F6PRR9_CIOIN)
HSP 1 Score: 55.1 bits (131), Expect = 4.280e-5
Identity = 21/43 (48.84%), Postives = 29/43 (67.44%), Query Frame = 1
Query: 583 CKICLDALVDILFLPCAHQCTCSRCGSAYEGKPCILCRRVVDK 711
CK+CLD + DI+F+PC H CTC C SA C +CR+ ++K
Sbjct: 573 CKVCLDKMADIVFIPCGHLCTCIECASALNK--CPICRKRIEK 613
BLAST of mRNA_E-fasciculatus_F_contig10093.99.1 vs. uniprot
Match:
H2Z945_CIOSA (RING-type domain-containing protein n=1 Tax=Ciona savignyi TaxID=51511 RepID=H2Z945_CIOSA)
HSP 1 Score: 49.3 bits (116), Expect = 9.130e-5
Identity = 22/49 (44.90%), Postives = 30/49 (61.22%), Query Frame = 1
Query: 583 CKICLDALVDILFLPCAHQCTCSRCGSAYEGKPCILCRRVVDKVQRVIK 729
CKICLD + +I+F+PC H C CS C K C +CR DK++ + K
Sbjct: 8 CKICLDRVSNIVFVPCGHLCCCSECADGM--KKCPICR---DKIREMYK 51
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig10093.99.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90 )
Total hits: 8
0 1 Expect = 1.81e-119 / Id = 81.20 Expect = 1.59e-118 / Id = 66.45 Expect = 7.40e-68 / Id = 48.96 Expect = 1.52e-39 / Id = 41.67 Expect = 5.64e-6 / Id = 30.61 Expect = 1.33e-5 / Id = 51.02 Expect = 4.28e-5 / Id = 48.84 Expect = 9.13e-5 / Id = 44.90 Sequence D7FX21_ECTSI A0A6H5JKP4_9PHAE A0A6H5J8V2_9PHAE D7FX18_ECTSI F6PS87_CIOIN A0A8B8ADR3_CRAVI F6PRR9_CIOIN H2Z945_CIOSA
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Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig10093.99.1
>prot_E-fasciculatus_F_contig10093.99.1 ID=prot_E-fasciculatus_F_contig10093.99.1|Name=mRNA_E-fasciculatus_F_contig10093.99.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=247bp
NIAPQLIGKQGQTINKLMKESRAKIVVKPYPDRSGNDVVITGTPNAVKTA KRLVEEFYRSKGCQPTALPPPSSAVAAASKAGGARARPAQPVVGGPGGGG GGGGGAGAAPVVVEDGAWGGELRQLLRVAGCEHHLERFREDQLDGEVLLM MDRRDFARMGVTEGEQIRILNALKGGVDDSDEDSDGLDPDHPDTCKICLD ALVDILFLPCAHQCTCSRCGSAYEGKPCILCRRVVDKVQRVIKLRG* back to top mRNA from alignment at E-fasciculatus_F_contig10093:37..2087+
Legend: polypeptide CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-fasciculatus_F_contig10093.99.1 ID=mRNA_E-fasciculatus_F_contig10093.99.1|Name=mRNA_E-fasciculatus_F_contig10093.99.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=2051bp|location=Sequence derived from alignment at E-fasciculatus_F_contig10093:37..2087+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)AACATCGCACCGCAGCTCATCGGAAAGCAGGGCCAGACGATCAACAAGCT
CATGAAGGAGAGCAGGGCGAAGATAGTAGTGAAACCGTATCCTGACAGGA
GCGGAAACGACGTGGTCATCACGGGGACCCCAAACGCGGTGAAG GTCAGC
AAGATCAGAGTGCTTGCAGCACGCTTGATTGTTGTCGCAGATGTGTTTGG
GGTGGGGTGTATCGTGGAGATACCAGTCTATTTTTTTTGCTGTGGTGTTT
GGTCGTTGGTGCCGGTGAAGGCGTCGTCGTCGTCGTCGATGCCCTCTCCC
TTCGCCACCCCCTCCAATATACACGAGGAGGGCAAAAGGTATCGTACGTC
CTTGTCAGTAGCGCACGCTCCCGCTCGCGAAGTGCCGGACAGCAGTCGTA
TATGCCATCACGCCAGCCGTGGCCCCTCTCTTTTCTTACGACTCCTCGCT
GAGCACTAGCCCACTGAAGGCTACGTAAAGGAGCTGGAGAGATACATACA
CGAAGGTCGTGCTAACCCAGCCTTCTCCAACCCGAAACGCCACGTCGCCG
TACATAACCATAACCGTGATTGTCTCTGCCCCCCTCCCCCTCCCACCGAC
CGCTTCGTGCTTTGCGCCTGGGCTCCAGACTGCCAAGCGGTTGGTAGAGG
AGTTCTACCGCTCCAAGGGCTGCCAGCCCACCGCTCTTCCGCCACCTTCC
TCCGCCGTCGCCGCCGCCAGCAAGGCCGGGGGTGCCCGAGCCCGCCCCGC
GCAACCGGTTGTTGGGGGTCCTGGCGGGGGCGGAGGCGGCGGCGGCGGCG
CGGGCGCGGCGCCCGTCGTTGTGGAGGATGGCGCGTGGGGGGGAGAGCTG
CGGCAACTGCTGAGGGTGGCCGGGTGCGAGCACCACCTGGAGAGGTTCCG
GGAGGACCAGCTGGACGGGGAGGTTCTGCTGATGATGGACAGGAGGGACT
TTGCTAGGATGGGGGTCACCGAG GTAAAAAAAAGCTGCGACTTATTGGTT
GTCTGCGGTTGGATGCGCTTTCTTAGGTGGCCGGCCAGCCGCTGCTGTTT
TTGTTTTTTTGGCCTGGCACCATGGCATGTGACGAGAGACGATCGGAATG
CGTTTTCAATGCCGGGAGAAGGCGAAACTCGCCCGGCGTTGTTGTTCAAG
CCCCGTGCATAACTTGCCGAGAGAAGAGGGGGTGCAGAACCAAGGAGAAA
GCCAAGCCCTGCCCTATTCGTGTCCGTTGCTGTCCCCCCTTTCTCGGTGC
TCGTGCTTCAAAGACCTGCGCCCACGTGGCCGTACTACTGCTCCCTCTGC
GGCAGTCGTTGCTCGCGCTTTATTTCGATGATGTTGTTGTTGTTGCGTTC
ACGCTTACAACCCTAGCCTTTTCTGCGCCGTGTCAACAGGGCGAGCAGAT
TCGCATCTTGAATGCCCTCAAGGGCGGCGTGGATGACTCCGACGAAGACT
CGGACGGCTTGGACCCGGACCACCCGGACACGTGCAAGATCTGCTTGGAC
GCGCTCGTGGAC GTGAGAATCTCGAGTGGGGGGATTAACTTTGCCGTCGA
CTTGATATTTCGTCGGGTTATGGTCGTCGCTGTTGCCGTTACAATCAAGG
TGGTTTAGGTGCGTTTCTCTCGGATATGCATCCCTGGTGGGGGGTACTCA
TGGTTGCGCACGCCGGAGTCGTTAGGTCAGTGACCTCGCATCCCGACGAT
GCTGCCGTGACGGAGCGATGTGTATGCCTTCCGGGTTTTCGCCGGCCCAG
GCTGCGTCTCATAAGGATGAACCAGTGTTTCGTTTTTTTTTTTGGGGGGG
GGACTGTTTTGTCGCTCCGTAATCCTGTGTACATGTACCACCACAAAGCA
GTCGAAAACCTAACACTCTCATCCCATTCCTCACGACCGCGACGTTGTGG
CATATACCCCTCTTGTCTTCAGATCCTGTTCCTGCCGTGCGCCCACCAGT
GCACGTGCTCGCGGTGCGGTTCCGCCTACGAGGGAAAGCCGTGCATCCTA
TGCAGGAGGGTGGTCGACAAGGTGCAGAGAGTCATCAAGCTACGCGGCTA
G back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig10093:37..2087+
>mRNA_E-fasciculatus_F_contig10093.99.1 ID=mRNA_E-fasciculatus_F_contig10093.99.1|Name=mRNA_E-fasciculatus_F_contig10093.99.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1482bp|location=Sequence derived from alignment at E-fasciculatus_F_contig10093:37..2087+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female) AACATCGCACCGCAGCTCATCGGAAAGCAGGGCCAGACGATCAACAAGCT CATGAAGGAGAGCAGGGCGAAGATAGTAGTGAAACCGTATCCTGACAGGA GCGGAAACGACGTGGTCATCACGGGGACCCCAAACGCGGTGAAGAACATC GCACCGCAGCTCATCGGAAAGCAGGGCCAGACGATCAACAAGCTCATGAA GGAGAGCAGGGCGAAGATAGTAGTGAAACCGTATCCTGACAGGAGCGGAA ACGACGTGGTCATCACGGGGACCCCAAACGCGGTGAAGACTGCCAAGCGG TTGGTAGAGGAGTTCTACCGCTCCAAGGGCTGCCAGCCCACCGCTCTTCC GCCACCTTCCTCCGCCGTCGCCGCCGCCAGCAAGGCCGGGGGTGCCCGAG CCCGCCCCGCGCAACCGGTTGTTGGGGGTCCTGGCGGGGGCGGAGGCGGC GGCGGCGGCGCGGGCGCGGCGCCCGTCGTTGTGGAGGATGGCGCGTGGGG GGGAGAGCTGCGGCAACTGCTGAGGGTGGCCGGGTGCGAGCACCACCTGG AGAGGTTCCGGGAGGACCAGCTGGACGGGGAGGTTCTGCTGATGATGGAC AGGAGGGACTTTGCTAGGATGGGGGTCACCGAGACTGCCAAGCGGTTGGT AGAGGAGTTCTACCGCTCCAAGGGCTGCCAGCCCACCGCTCTTCCGCCAC CTTCCTCCGCCGTCGCCGCCGCCAGCAAGGCCGGGGGTGCCCGAGCCCGC CCCGCGCAACCGGTTGTTGGGGGTCCTGGCGGGGGCGGAGGCGGCGGCGG CGGCGCGGGCGCGGCGCCCGTCGTTGTGGAGGATGGCGCGTGGGGGGGAG AGCTGCGGCAACTGCTGAGGGTGGCCGGGTGCGAGCACCACCTGGAGAGG TTCCGGGAGGACCAGCTGGACGGGGAGGTTCTGCTGATGATGGACAGGAG GGACTTTGCTAGGATGGGGGTCACCGAGGGCGAGCAGATTCGCATCTTGA ATGCCCTCAAGGGCGGCGTGGATGACTCCGACGAAGACTCGGACGGCTTG GACCCGGACCACCCGGACACGTGCAAGATCTGCTTGGACGCGCTCGTGGA CGGCGAGCAGATTCGCATCTTGAATGCCCTCAAGGGCGGCGTGGATGACT CCGACGAAGACTCGGACGGCTTGGACCCGGACCACCCGGACACGTGCAAG ATCTGCTTGGACGCGCTCGTGGACATCCTGTTCCTGCCGTGCGCCCACCA GTGCACGTGCTCGCGGTGCGGTTCCGCCTACGAGGGAAAGCCGTGCATCC TATGCAGGAGGGTGGTCGACAAGGTGCAGAGAGTCATCAAGCTACGCGGC TAGATCCTGTTCCTGCCGTGCGCCCACCAGTGCACGTGCTCGCGGTGCGG TTCCGCCTACGAGGGAAAGCCGTGCATCCTATGCAGGAGGGTGGTCGACA AGGTGCAGAGAGTCATCAAGCTACGCGGCTAG back to top