mRNA_E-fasciculatus_F_contig10093.99.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig10093.99.1 vs. uniprot
Match: D7FX21_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX21_ECTSI) HSP 1 Score: 373 bits (958), Expect = 1.810e-119 Identity = 203/250 (81.20%), Postives = 207/250 (82.80%), Query Frame = 1
Query: 1 NIAPQLIGKQGQTINKLMKESRAKIVVKPYPDRSGNDVVITGTPNAVKTAKRLVEEFYRSKGCQPTALPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVVVEDGAWGGELRQLLRVAGCEHHLERFREDQLDGEVLLMMDRRDFARMGVTEGEQIRILNALKGG----VDDSDEDSDGLDPDHPDTCKICLDALVDILFLPCAHQCTCSRCGSAYEGKPCILCRRVVDKVQRVIKLRG 738
NIAPQLIGKQGQT+NKLMK+SRAKIVVKPYPDRSGNDV+ITGTPNAVKTAKRLVEEFYRSKGCQP+ALP XXXXXXXXXX VVVEDGAWGGELRQLLRVAGCEHHLERFREDQLDGEVLLMMDRRDF RMGVTEGEQIRILNALKG DSDGLDPDHPDTCKICLDALVDILFLPCAHQCTCSRCGSAYEGKPCILCRRVVDKVQRVIKLRG
Sbjct: 774 NIAPQLIGKQGQTVNKLMKDSRAKIVVKPYPDRSGNDVIITGTPNAVKTAKRLVEEFYRSKGCQPSALPPPSSAVAARKAEGARARPAQPVTGGPXXXXXXXXXX-----VVVEDGAWGGELRQLLRVAGCEHHLERFREDQLDGEVLLMMDRRDFERMGVTEGEQIRILNALKGSGGXXXXXXXXDSDGLDPDHPDTCKICLDALVDILFLPCAHQCTCSRCGSAYEGKPCILCRRVVDKVQRVIKLRG 1018
BLAST of mRNA_E-fasciculatus_F_contig10093.99.1 vs. uniprot
Match: A0A6H5JKP4_9PHAE (RING-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKP4_9PHAE) HSP 1 Score: 351 bits (901), Expect = 1.590e-118 Identity = 208/313 (66.45%), Postives = 212/313 (67.73%), Query Frame = 1
Query: 1 NIAPQLIGKQGQTINKLMKESRAKIVVKPYPDRSGNDVVITGTPNAVKTAK---------------------------------------------------------------RLVEEFYRSKGCQPTALPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVVVEDGAWGGELRQLLRVAGCEHHLERFREDQLDGEVLLMMDRRDFARMGVTEGEQIRILNALKG----GVDDSDEDSDGLDPDHPDTCKICLDALVDILFLPCAHQCTCSRCGSAYEGKPCILCRRVVDKVQRVIKLRG 738
NIAPQLIGKQGQT++KLMKESRAKIVVKPYPDRSGNDVVITGTPNAVK +K R+ EEFYRSKGCQPTALP XXXXXXXXXXXX VVVEDGAWGGELRQLLRVAGCEHHLERFREDQLDGEVLLMMDRRDF RMGVT GEQIRILNALKG GVDDSDEDSDGLDPDHPDTCKICLDALVDILFLPCAH CTCSRCGSAYEGKPCILCRRVVDKVQRVIKLRG
Sbjct: 52 NIAPQLIGKQGQTVSKLMKESRAKIVVKPYPDRSGNDVVITGTPNAVKVSKSRVLGSTLDCCRGCVRVRCLAIPLYFQAVVVGRCDGVGAGCFVVVVNALSLRHPLQCTRRVTMRVEEEFYRSKGCQPTALPPPSSAVAAARKAEGARARPAQPVTGXXXXXXXXXXXX----VVVEDGAWGGELRQLLRVAGCEHHLERFREDQLDGEVLLMMDRRDFERMGVTVGEQIRILNALKGSGAGGVDDSDEDSDGLDPDHPDTCKICLDALVDILFLPCAHHCTCSRCGSAYEGKPCILCRRVVDKVQRVIKLRG 360
BLAST of mRNA_E-fasciculatus_F_contig10093.99.1 vs. uniprot
Match: A0A6H5J8V2_9PHAE (RING-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J8V2_9PHAE) HSP 1 Score: 236 bits (601), Expect = 7.400e-68 Identity = 164/335 (48.96%), Postives = 185/335 (55.22%), Query Frame = 1
Query: 4 IAPQLIGKQGQTINKLMKESRAKIVVKPYPDRSGNDVVITGTPNAVKTAKRLVEEFYRSKGCQPTALPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-----------------------------------VVVEDGAW----------GGELRQLLRVAGCEHHLERFREDQLDGEVLLMMDRRDFARMGVTEGEQIRILNALK------------------------------------GGV--------DDSDED--SDGLDPDHPDTCKICLDALVDILFLPCAHQCTCSRCGSAYEGKPCILCRRVVDKVQRVIKLR 735
IA Q+IG+ GQT+N+LMKESRA+IV+KPY D++G+DVVITG+P A TA+RLVE+FYRSKG +PT LP XXXXXXXXXXXXX VV G GGEL QLLR A CEHHLERF DQLDGEVLL M+RRDF RMGVTE EQ RIL+ALK GGV DD DED SDGLDPDHPDTCKIC+DALV ILFLPCAHQCTC RCGS + GKPCI+CR+ V + Q VI+LR
Sbjct: 741 IAGQVIGRGGQTVNRLMKESRARIVLKPYADKTGHDVVITGSPQA--TARRLVEDFYRSKGIEPTHLPPXXXXXXXXXXXXXGRPGGVAPRARLPDPMMPTEAMIGHLGRGRTMAVAGPAAAAAAGMRAPSGAIPQGARPVAQPVVYGGGXXXXXXXXVDVSGGELPQLLRAARCEHHLERFLRDQLDGEVLLEMERRDFDRMGVTEAEQSRILSALKHAGEGXXXXXXXXXXXXXGRRENLAQRVVTVVRGTSGGVATPFEVEDDDVDEDXDSDGLDPDHPDTCKICMDALVGILFLPCAHQCTCVRCGSGFVGKPCIICRQKVTRAQPVIRLR 1073
BLAST of mRNA_E-fasciculatus_F_contig10093.99.1 vs. uniprot
Match: D7FX18_ECTSI (KH domain containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX18_ECTSI) HSP 1 Score: 155 bits (392), Expect = 1.520e-39 Identity = 125/300 (41.67%), Postives = 148/300 (49.33%), Query Frame = 1
Query: 4 IAPQLIGKQGQTINKLMKESRAKIVVKPYPDRSGNDVVITGTPNAVKTAKRLVEEFYRSKGCQPTALPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXV----------------------VVEDGA------------WGG---------------ELRQLLRVAGCEHHLERFREDQLDGEVLLMMDRRDFARMGVTEGEQIRILNALKGGVDDSD-----------------------------------------ED------SDGLDPDHPDTCKICLDALVDI 615
IA Q+IG+ GQT+N+LMKESRA+IV+K Y D++G+DVVITG+P AV T +RLVE+FYRSKG +PT L XXXXXXXXXXXXX + + GA +GG EL QLLR A CEHHLERF+ DQLDGEVLL M+RR+F RMGVTE EQ RI++ALK D ED SDGLDPDHPDTCKIC+DALV +
Sbjct: 595 IAGQVIGRGGQTVNRLMKESRARIVLKTYADKTGHDVVITGSPQAVLTGRRLVEDFYRSKGIEPTLLQPPSXXXXXXXXXXXXXGRPGGVAPRARLPDPMMPTEAMIGHLGRGRTMAGAGPAAAVGMRAPSGAIPQGARPVAQXXXXXXMFGGXXXXXXXXXVDVSGVELPQLLRAARCEHHLERFKRDQLDGEVLLEMERREFDRMGVTEAEQGRIMSALKHAGDGXXXXXXXXXXXXXXXXXXRENSAQRVAAVVRGASGVMATPVEVEDXXXXXXSDGLDPDHPDTCKICMDALVGL 894
BLAST of mRNA_E-fasciculatus_F_contig10093.99.1 vs. uniprot
Match: F6PS87_CIOIN (RING-type domain-containing protein n=2 Tax=Ciona intestinalis TaxID=7719 RepID=F6PS87_CIOIN) HSP 1 Score: 57.8 bits (138), Expect = 5.640e-6 Identity = 30/98 (30.61%), Postives = 46/98 (46.94%), Query Frame = 1
Query: 499 IRILNALKGGVDDSDEDSDGLDPDHPDT---------------------------CKICLDALVDILFLPCAHQCTCSRCGSAYEGKPCILCRRVVDK 711
+ I++A+ G D SD++ ++ D P T CK+CLD + DI+F+PC H CTC C SA C +CR+ ++K
Sbjct: 614 VSIIDAMNDGTDSSDDE---MEADEPQTQTPMSISDLDLSPSMLARVAELEEERKCKVCLDKMADIVFIPCGHLCTCIECASALNK--CPICRKRIEK 706
BLAST of mRNA_E-fasciculatus_F_contig10093.99.1 vs. uniprot
Match: A0A8B8ADR3_CRAVI (death-associated inhibitor of apoptosis 2-like n=1 Tax=Crassostrea virginica TaxID=6565 RepID=A0A8B8ADR3_CRAVI) HSP 1 Score: 56.2 bits (134), Expect = 1.330e-5 Identity = 25/49 (51.02%), Postives = 32/49 (65.31%), Query Frame = 1
Query: 583 CKICLDALVDILFLPCAHQCTCSRCGSAYEGKPCILCRRVVDKVQRVIK 729
CKIC+DA +DILFLPC H CTC C A + + C +C+ + QRV K
Sbjct: 305 CKICMDAEMDILFLPCGHLCTCRTC--AIKLRECPVCKERIQNQQRVYK 351
BLAST of mRNA_E-fasciculatus_F_contig10093.99.1 vs. uniprot
Match: F6PRR9_CIOIN (RING-type domain-containing protein n=1 Tax=Ciona intestinalis TaxID=7719 RepID=F6PRR9_CIOIN) HSP 1 Score: 55.1 bits (131), Expect = 4.280e-5 Identity = 21/43 (48.84%), Postives = 29/43 (67.44%), Query Frame = 1
Query: 583 CKICLDALVDILFLPCAHQCTCSRCGSAYEGKPCILCRRVVDK 711
CK+CLD + DI+F+PC H CTC C SA C +CR+ ++K
Sbjct: 573 CKVCLDKMADIVFIPCGHLCTCIECASALNK--CPICRKRIEK 613
BLAST of mRNA_E-fasciculatus_F_contig10093.99.1 vs. uniprot
Match: H2Z945_CIOSA (RING-type domain-containing protein n=1 Tax=Ciona savignyi TaxID=51511 RepID=H2Z945_CIOSA) HSP 1 Score: 49.3 bits (116), Expect = 9.130e-5 Identity = 22/49 (44.90%), Postives = 30/49 (61.22%), Query Frame = 1
Query: 583 CKICLDALVDILFLPCAHQCTCSRCGSAYEGKPCILCRRVVDKVQRVIK 729
CKICLD + +I+F+PC H C CS C K C +CR DK++ + K
Sbjct: 8 CKICLDRVSNIVFVPCGHLCCCSECADGM--KKCPICR---DKIREMYK 51 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig10093.99.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 8
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig10093.99.1 >prot_E-fasciculatus_F_contig10093.99.1 ID=prot_E-fasciculatus_F_contig10093.99.1|Name=mRNA_E-fasciculatus_F_contig10093.99.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=247bp NIAPQLIGKQGQTINKLMKESRAKIVVKPYPDRSGNDVVITGTPNAVKTAback to top mRNA from alignment at E-fasciculatus_F_contig10093:37..2087+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig10093.99.1 ID=mRNA_E-fasciculatus_F_contig10093.99.1|Name=mRNA_E-fasciculatus_F_contig10093.99.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=2051bp|location=Sequence derived from alignment at E-fasciculatus_F_contig10093:37..2087+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig10093:37..2087+ >mRNA_E-fasciculatus_F_contig10093.99.1 ID=mRNA_E-fasciculatus_F_contig10093.99.1|Name=mRNA_E-fasciculatus_F_contig10093.99.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1482bp|location=Sequence derived from alignment at E-fasciculatus_F_contig10093:37..2087+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |