prot_E_fasciculatus_S2_contig9908.17901.1 (polypeptide) Ectocarpus fasciculatus EfasUO2

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E_fasciculatus_S2_contig9908.17901.1
Unique Nameprot_E_fasciculatus_S2_contig9908.17901.1
Typepolypeptide
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Sequence length226
Homology
BLAST of mRNA_E_fasciculatus_S2_contig9908.17901.1 vs. uniprot
Match: E6ZET9_ECTSI (Orf183, hypothetical mitochondrial protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=E6ZET9_ECTSI)

HSP 1 Score: 165 bits (417), Expect = 5.350e-48
Identity = 90/149 (60.40%), Postives = 109/149 (73.15%), Query Frame = 0
Query:    1 LSLLLFLSPVYGAFWLLLATLYFLFKGTYKNIFIAWGVFFSTWYFFFIVLFSDFEYQIWIGGDHTLKIMIYLCDKYSIHRSPWYIKPFEGFYFQTLLLLHLLSSKLGFPIYVPSL---IKVFISFLKYILG-GDKGPANCAGEENSKKK 145
            LSLLLF SPVYGA WLL ATLYFLFKG YKNIFI W +FF  WYFFFI   SD++  I IGG+HT  IM+Y   KYS     WY + F+ F +QT+++L  LS +LGFP+Y+PS+   +K F+SFLK I   GD+GPA CAGE+NSKKK
Sbjct:   32 LSLLLFWSPVYGACWLLTATLYFLFKGDYKNIFIVWVLFFCIWYFFFIACLSDYKSSILIGGEHTKDIMMYFSYKYSPSSCYWYSRLFKDFCYQTVIMLDFLSIELGFPVYIPSVFAVLKFFMSFLKSIFDRGDEGPAQCAGEKNSKKK 180          
BLAST of mRNA_E_fasciculatus_S2_contig9908.17901.1 vs. uniprot
Match: A0A089N119_PETFA (Uncharacterized protein n=1 Tax=Petalonia fascia TaxID=2893 RepID=A0A089N119_PETFA)

HSP 1 Score: 138 bits (348), Expect = 8.910e-37
Identity = 82/233 (35.19%), Postives = 123/233 (52.79%), Query Frame = 0
Query:    2 SLLLFLSPVYGAFWLLLATLYFLFKGTYKNIFIAWGVFFSTWYFFFIVLFSDFEYQIWIGGDHTLKIMIYLCDKYSI--HRSPWYIKPFEGFYFQTLLLLHLLSSKLGFPIYVPSLIKVFISFLKYILGGDKGPANCAGEENSKKKGGDSSFFSSPFKGSAASEPKAKTYDDLEAYK--------HWSPLKSKEGFSGTRYVYYREVWLPVFGRFTGCGSRDASKEEILKDKR 224
            S+++ +SP+   F L   T++F++   +K+I   WG++   WYF F++L   F+  IWIGG++T  I  YL  K +   +   WY    + F FQT+L LH LSSKLGFPIY+PS+IK FI  +K++      P  C+ E+ S+       F S+   G   S  K    D+    K        ++     K   SG RY+ Y E     F ++T C SR+A++EEIL  K+
Sbjct:   24 SVMILISPIMSIFLLFFPTVFFIYSSDFKSILKIWGIYIIGWYFLFMILMLGFDSSIWIGGEYTRPISEYLLSKATKAPYSDKWYAYMLDSFCFQTVLFLHTLSSKLGFPIYLPSIIKGFIGLIKFLFDDRNNPPRCSPEKKSEP------FSSTTVGGFKPSYQKGDVLDECAKMKASIQASRGYFDLFNLKNTVSGDRYISYGEAGFQFFKKYTICYSRNATQEEILDQKK 250          
BLAST of mRNA_E_fasciculatus_S2_contig9908.17901.1 vs. uniprot
Match: A0A3Q8QZN6_9PHAE (Uncharacterized protein n=1 Tax=Endarachne binghamiae TaxID=698476 RepID=A0A3Q8QZN6_9PHAE)

HSP 1 Score: 121 bits (303), Expect = 4.360e-30
Identity = 81/230 (35.22%), Postives = 122/230 (53.04%), Query Frame = 0
Query:    7 LSPVYGAFWLLLATLYFLFKGTYKNIFIAWGVFFSTWYFFFIVLFSDFEYQIWIGGDHTLKIMIYLCDKYSIHRSP--WYIKPFEGFYFQTLLLLHLLSSKLGFPIYVPSLIKVFISFLKYILGGDKGPA-NCAGEENSKKKGGDSSFFSSPFKGSAASEPK--------AKTYDDLEAYKHWSPL-KSKEGFSGTRYVYYREVWLPVFGRFTGCGSRDASKEEILKDKR 224
            +SP+   F LL++T++   K  YK+IF+ WG FF TWYF F      F+  IWIGG+++  I+ YL    S +  P  WY    E F  Q+++LL L+S+KLGF +YVPSL+K  +   K ILG   G +  C+ E+ SK       FFSS     + + P         A+  D +   + +  L       SG  ++ Y EV +P +   + C SR+A+KEE+  +K+
Sbjct:   29 ISPIISVFILLVSTIFLSCKNNYKDIFMIWGFFFFTWYFLFTACMLGFDSPIWIGGEYSRLILEYLVINTSNYSGPIRWYTFMLENFCIQSVVLLDLISNKLGFSLYVPSLLKGLLILCKSILGKGGGSSPKCSPEKGSK-------FFSSKVVKESKTYPVKTDVLDSCAEIRDSIRRTRGYFDLYNGGNRISGNCHISYLEVSIPFYQNLSLCFSRNATKEELANNKK 251          
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig9908.17901.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
E6ZET9_ECTSI5.350e-4860.40Orf183, hypothetical mitochondrial protein n=1 Tax... [more]
A0A089N119_PETFA8.910e-3735.19Uncharacterized protein n=1 Tax=Petalonia fascia T... [more]
A0A3Q8QZN6_9PHAE4.360e-3035.22Uncharacterized protein n=1 Tax=Endarachne bingham... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 91..112
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 113..225
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 26..31
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..5
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 52..90
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 6..25
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 32..51
NoneNo IPR availableTMHMMTMhelixcoord: 32..51
NoneNo IPR availableTMHMMTMhelixcoord: 4..25
NoneNo IPR availableTMHMMTMhelixcoord: 106..128

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig9908contigE_fasciculatus_S2_contig9908:3332..4032 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO22022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig9908.17901.1mRNA_E_fasciculatus_S2_contig9908.17901.1Ectocarpus fasciculatus EfasUO2mRNAE_fasciculatus_S2_contig9908 3332..4032 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E_fasciculatus_S2_contig9908.17901.1 ID=prot_E_fasciculatus_S2_contig9908.17901.1|Name=mRNA_E_fasciculatus_S2_contig9908.17901.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=226bp
LSLLLFLSPVYGAFWLLLATLYFLFKGTYKNIFIAWGVFFSTWYFFFIVL
FSDFEYQIWIGGDHTLKIMIYLCDKYSIHRSPWYIKPFEGFYFQTLLLLH
LLSSKLGFPIYVPSLIKVFISFLKYILGGDKGPANCAGEENSKKKGGDSS
FFSSPFKGSAASEPKAKTYDDLEAYKHWSPLKSKEGFSGTRYVYYREVWL
PVFGRFTGCGSRDASKEEILKDKRG*
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