prot_E_fasciculatus_S2_contig9873.17872.1 (polypeptide) Ectocarpus fasciculatus EfasUO2

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_E_fasciculatus_S2_contig9873.17872.1
Unique Name	prot_E_fasciculatus_S2_contig9873.17872.1
Type	polypeptide
Organism	Ectocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Sequence length	83

Homology

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BLAST of mRNA_E_fasciculatus_S2_contig9873.17872.1 vs. uniprot
Match: A0A6H5JMA3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMA3_9PHAE)

HSP 1 Score: 108 bits (269), Expect = 3.210e-26
Identity = 51/57 (89.47%), Postives = 54/57 (94.74%), Query Frame = 0

Query:   20 FFATGMTCNFSLATAMGGSRSLPELYVLQTSYSVFLPVLMFGIPVVVDFWVQSLPMH 76
            FFA GM CNFSLATAMGGS SLPELYVLQT+Y+VFLPVLMFGIP+VVDFWVQSLPMH
Sbjct:  130 FFAAGMACNFSLATAMGGSLSLPELYVLQTNYAVFLPVLMFGIPIVVDFWVQSLPMH 186

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BLAST of mRNA_E_fasciculatus_S2_contig9873.17872.1 vs. uniprot
Match: D8LSN7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSN7_ECTSI)

HSP 1 Score: 102 bits (254), Expect = 1.800e-25
Identity = 47/52 (90.38%), Postives = 51/52 (98.08%), Query Frame = 0

Query:   25 MTCNFSLATAMGGSRSLPELYVLQTSYSVFLPVLMFGIPVVVDFWVQSLPMH 76
            M CNFSLATAMGGSRSLPELYVLQT+Y+VFLPVLMFGIP++VDFWVQSLPMH
Sbjct:    1 MACNFSLATAMGGSRSLPELYVLQTNYAVFLPVLMFGIPIIVDFWVQSLPMH 52

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BLAST of mRNA_E_fasciculatus_S2_contig9873.17872.1 vs. uniprot
Match: D8LSN6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSN6_ECTSI)

HSP 1 Score: 80.1 bits (196), Expect = 1.050e-16
Identity = 38/46 (82.61%), Postives = 41/46 (89.13%), Query Frame = 0

Query:   31 LATAMGGSRSLPELYVLQTSYSVFLPVLMFGIPVVVDFWVQSLPMH 76
            L  + G +RSLPELYVLQTSYSVFLPVLMFGIP+VVDFW QSLPMH
Sbjct:   17 LGDSDGRNRSLPELYVLQTSYSVFLPVLMFGIPIVVDFWAQSLPMH 62

[Close]

BLAST of mRNA_E_fasciculatus_S2_contig9873.17872.1 vs. uniprot
Match: A0A6H5JML4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JML4_9PHAE)

HSP 1 Score: 48.5 bits (114), Expect = 9.310e-5
Identity = 21/22 (95.45%), Postives = 22/22 (100.00%), Query Frame = 0

Query:   55 LPVLMFGIPVVVDFWVQSLPMH 76
            LPVLMFGIP+VVDFWVQSLPMH
Sbjct:    3 LPVLMFGIPIVVDFWVQSLPMH 24

The following BLAST results are available for this feature:

BLAST of mRNA_E_fasciculatus_S2_contig9873.17872.1 vs. uniprot

BLAST of mRNA_E_fasciculatus_S2_contig9873.17872.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 4


Match Name	E-value	Identity	Description
A0A6H5JMA3_9PHAE	3.210e-26	89.47	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D8LSN7_ECTSI	1.800e-25	90.38	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
D8LSN6_ECTSI	1.050e-16	82.61	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5JML4_9PHAE	9.310e-5	95.45	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 71..82
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 1..11
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 51..70
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 32..50
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 12..31
None	No IPR available	TMHMM	TMhelix		coord: 13..35
None	No IPR available	TMHMM	TMhelix		coord: 50..72

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
E_fasciculatus_S2_contig9873	contig	E_fasciculatus_S2_contig9873:238..3078 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2	2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90	2022-09-16
OGS1.0 of Ectocarpus fasciculatus EfasUO2	2022-07-07

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_E_fasciculatus_S2_contig9873.17872.1	mRNA_E_fasciculatus_S2_contig9873.17872.1	Ectocarpus fasciculatus EfasUO2	mRNA	E_fasciculatus_S2_contig9873 238..3078 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_E_fasciculatus_S2_contig9873.17872.1 ID=prot_E_fasciculatus_S2_contig9873.17872.1|Name=mRNA_E_fasciculatus_S2_contig9873.17872.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=83bp
FARKLWSGSSCRIAGGEICFFATGMTCNFSLATAMGGSRSLPELYVLQTS
YSVFLPVLMFGIPVVVDFWVQSLPMHVSEQAI*