prot_E_fasciculatus_S2_contig9809.17811.1 (polypeptide) Ectocarpus fasciculatus EfasUO2

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_E_fasciculatus_S2_contig9809.17811.1
Unique Name	prot_E_fasciculatus_S2_contig9809.17811.1
Type	polypeptide
Organism	Ectocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Sequence length	716

Homology

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BLAST of mRNA_E_fasciculatus_S2_contig9809.17811.1 vs. uniprot
Match: A0A6H5JRB6_9PHAE (RanBP2-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRB6_9PHAE)

HSP 1 Score: 476 bits (1224), Expect = 1.030e-153
Identity = 409/636 (64.31%), Postives = 432/636 (67.92%), Query Frame = 0

Query:  123 VGIVRDGGDIIRKDSGGCRXXXXXXXXXXXXESRDVAPGDAAEILGVAGRLVRTRGPWRCIFSKGRQPSSSVGEAGNNGTAATPAAAAAAVMQPSAPKPVGEVXXXXXXXXXXXXXXXAAGVMRRTERCESGGEGALLQAGERALSSVGGDGVRSNGG------GDD-------AATVGDDGRSGREAAEELSVVAAA--DGRAGFGGSGEGKDGSGGQEEAARPVREPRAEQGPVYLNTATMETAREPPAELVALADQAESAGEYLVFVPSHRFIAARAA--PVSALSLKGNVAAASASSHKCRNMDVDSNE----------------------AVRAATMSEAASAVGSAAERSAGPPRSPCSSAVNAG-------------NXXXXXXXXXXXXXXXXXXXXRGEQAQGTQQAPPLEASTTPSTVVKPVLGXXXXXXXXXXXXXXXXXX-TWDRLSSLPTIDLSQGVASAPLDVENAGDAGGNAAVEAVSATTVPVTWTCVACTLTNKARRTTCELCGTSRPKACHNKRPLSSTSLSADSGXXXXXXXHRRVGSVSKLRLRQPARSRSSVTPFTSRPGDGXXXXXXXXXXXXXXXXXXXXXXXXPHPPLSQSAATTPTNGFPAVRSQERSARP 705
             GIV  GG+++R D+GGCR             SR+ A GDAAEILGVAGRLVRTRGPWRCIFS+GRQPS+SVGE  NNGTA   AAAAA VM             XXXXXXXXXXXXXAAGVMRRTE C+S        AGERAL S GG GV  NGG      G+        AATVG DGRSG +  +ELSVVAAA  DGRAGFGGSGEG+D  GGQEEAARPVREP A+QGPVYLNTATMET REPPAELVALADQAESAG+YLVFVPSHRF+AA A   P  A S   NVAAA A SH   NMDV+SN                       AV  A MSEA SAVG+A ER       P  +A +                XXXXXXXXXXX         RGEQAQ TQQ  PLEASTT STV K VLGXXXXXXXXXXXXXXXXXX TWDRLSSLPTIDLSQGVASAPLDVENAG  GGN AV      TV  TWTCVACTLTNKARRTTCELCGTSRPKA   +             XXXXXXXHRRVGSVSKLRLRQPARS  S+TPFTSRP  GXXXXXXXXXXXXXXXXX       P PPLSQ A TTP NGFP+VRSQERS+ P
Sbjct:  228 AGIVGGGGNVMRNDAGGCRSLVGRSSVVGGVASRNDAAGDAAEILGVAGRLVRTRGPWRCIFSQGRQPSASVGEVRNNGTAE--AAAAAGVMX------------XXXXXXXXXXXXXAAGVMRRTEGCKS--------AGERALRSAGGYGVERNGGCASNGVGESNGSGVGAAATVGGDGRSGSKTTQELSVVAAAAEDGRAGFGGSGEGRDRGGGQEEAARPVREPGADQGPVYLNTATMETVREPPAELVALADQAESAGDYLVFVPSHRFVAAAAGAVPAPASSHNSNVAAAPAFSHCSSNMDVESNXXXXXXXXXXXXXXXXXXXXXXAAVTVARMSEATSAVGAAGER-----EQPAVTAASESCSPXXXXXXXXXXXXXXXXXXXXXXVGPNPRRNGRGEQAQDTQQGSPLEASTTLSTVAKAVLGXXXXXXXXXXXXXXXXXXXTWDRLSSLPTIDLSQGVASAPLDVENAGGTGGNKAV------TVATTWTCVACTLTNKARRTTCELCGTSRPKASQQRXXXXXXXXXXX--XXXXXXXHRRVGSVSKLRLRQPARS-PSITPFTSRPAGGXXXXXXXXXXXXXXXXXS------PQPPLSQPAGTTPINGFPSVRSQERSSPP 821

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BLAST of mRNA_E_fasciculatus_S2_contig9809.17811.1 vs. uniprot
Match: D8LPZ5_ECTSI (RanBP2-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPZ5_ECTSI)

HSP 1 Score: 219 bits (557), Expect = 4.420e-62
Identity = 183/285 (64.21%), Postives = 190/285 (66.67%), Query Frame = 0

Query:  350 METAREPPAELVALADQAESAGEYLVFVPSHRFIAARAA--PVSALSLKGNVAAASASSHKCRNMDVD---------------------SNEAVRAATMSEAASAVGSAAER----------SAGPPRSPCSSAVNAGNXXXXXXXXXXXXXXXXXXXXRGEQAQGTQQAPPLEASTTPSTVVKPVLGXXXXXXXXXXXXXXXXXXTWDRLSSLPTIDLSQGVASAPLDVENAGDAGGNAAVEAVSATTVPVTWTCVACTLTNKARRTTCELCGTSRPKACHNKR 601
            METAREPPAELVALADQAESAG+YLVFVPSHRF+AA A   P SA S   NVAAA   SH+  NMDVD                     SN AV  A MSEAASAV +AAER          S  P             XXXXXXXXXXXX        RGEQAQ TQQ  PLEASTTPSTV K VLGXXXXXXXXXXXXXXXX  TWDRLSSLPTIDLSQGVASAP+DVEN G AGGN AV      TV  TWTCVACTLTNK+RRTTCE+CGTSRPKA    R
Sbjct:    1 METAREPPAELVALADQAESAGDYLVFVPSHRFVAAAAGAVPASASSRNSNVAAAPVFSHRSSNMDVDGNGSNPAAASALSHNSNMDTDSNAAVTVARMSEAASAVVAAAERVLQAVTAAGESCSPXXXXXXXXXXXXXXXXXXXXXXXXXGSNTRRNSRGEQAQDTQQGLPLEASTTPSTVAKAVLGXXXXXXXXXXXXXXXXG-TWDRLSSLPTIDLSQGVASAPVDVENGGGAGGNKAV------TVATTWTCVACTLTNKSRRTTCEVCGTSRPKASQQTR 278

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BLAST of mRNA_E_fasciculatus_S2_contig9809.17811.1 vs. uniprot
Match: D8LPZ3_ECTSI (SAP domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPZ3_ECTSI)

HSP 1 Score: 89.7 bits (221), Expect = 1.710e-16
Identity = 59/79 (74.68%), Postives = 62/79 (78.48%), Query Frame = 0

Query:    2 REKDKERLANARTARAAGLVSGSTGSGGGPRQALRPAGIGGGAAATAAGDGSPAPETEKIVISKEMKDGFSALIASARS 80
            REKDKER+ANA+TARA GLVSGS GSGGG RQALRPAG GG             PE+EKIVISKEMKDGFSALIASARS
Sbjct:  136 REKDKERMANAKTARA-GLVSGSAGSGGGSRQALRPAGTGG---XXXXXXXXXXPESEKIVISKEMKDGFSALIASARS 210

The following BLAST results are available for this feature:

BLAST of mRNA_E_fasciculatus_S2_contig9809.17811.1 vs. uniprot

BLAST of mRNA_E_fasciculatus_S2_contig9809.17811.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 3


Match Name	E-value	Identity	Description
A0A6H5JRB6_9PHAE	1.030e-153	64.31	RanBP2-type domain-containing protein n=1 Tax=Ecto...	[more]
D8LPZ5_ECTSI	4.420e-62	64.21	RanBP2-type domain-containing protein n=1 Tax=Ecto...	[more]
D8LPZ3_ECTSI	1.710e-16	74.68	SAP domain-containing protein n=1 Tax=Ectocarpus s...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001876	Zinc finger, RanBP2-type	SMART	SM00547	zf_4	coord: 568..592 e-value: 9.7E-6 score: 35.1
IPR001876	Zinc finger, RanBP2-type	PROSITE	PS01358	ZF_RANBP2_1	coord: 570..589
IPR001876	Zinc finger, RanBP2-type	PROSITE	PS50199	ZF_RANBP2_2	coord: 570..595 score: 8.919
None	No IPR available	GENE3D	2.20.28.140		coord: 563..609 e-value: 6.0E-7 score: 31.1
IPR036443	Zinc finger, RanBP2-type superfamily	SUPERFAMILY	90209	Ran binding protein zinc finger-like	coord: 567..593

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
E_fasciculatus_S2_contig9809	contig	E_fasciculatus_S2_contig9809:1359..5509 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2	2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90	2022-09-16
OGS1.0 of Ectocarpus fasciculatus EfasUO2	2022-07-07

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_E_fasciculatus_S2_contig9809.17811.1	mRNA_E_fasciculatus_S2_contig9809.17811.1	Ectocarpus fasciculatus EfasUO2	mRNA	E_fasciculatus_S2_contig9809 1359..5509 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_E_fasciculatus_S2_contig9809.17811.1 ID=prot_E_fasciculatus_S2_contig9809.17811.1|Name=mRNA_E_fasciculatus_S2_contig9809.17811.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=716bp
KREKDKERLANARTARAAGLVSGSTGSGGGPRQALRPAGIGGGAAATAAG
DGSPAPETEKIVISKEMKDGFSALIASARSKAKKRPSASTCSDGGGGGSS
DNKKARVSEGSDCGGGGGGSDGVGIVRDGGDIIRKDSGGCRSLSGSNAAG
GGGESRDVAPGDAAEILGVAGRLVRTRGPWRCIFSKGRQPSSSVGEAGNN
GTAATPAAAAAAVMQPSAPKPVGEVCNNGTAAAAAAAAAAAAGVMRRTER
CESGGEGALLQAGERALSSVGGDGVRSNGGGDDAATVGDDGRSGREAAEE
LSVVAAADGRAGFGGSGEGKDGSGGQEEAARPVREPRAEQGPVYLNTATM
ETAREPPAELVALADQAESAGEYLVFVPSHRFIAARAAPVSALSLKGNVA
AASASSHKCRNMDVDSNEAVRAATMSEAASAVGSAAERSAGPPRSPCSSA
VNAGNGSGGAPATAAAVGSDSSRSSRGEQAQGTQQAPPLEASTTPSTVVK
PVLGGSSTSSSGRGGGGGGGGGTWDRLSSLPTIDLSQGVASAPLDVENAG
DAGGNAAVEAVSATTVPVTWTCVACTLTNKARRTTCELCGTSRPKACHNK
RPLSSTSLSADSGGGDSGGGHRRVGSVSKLRLRQPARSRSSVTPFTSRPG
DGGGGGGGGATGAGVSTGVPASSSSSPHPPLSQSAATTPTNGFPAVRSQE
RSARPGAAAAEKAQQ*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR036443	Znf_RanBP2_sf
IPR001876	Znf_RanBP2