Homology
BLAST of mRNA_E-fasciculatus_F_contig10071.78.1 vs. uniprot
Match:
D8LRX4_ECTSI (WW domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRX4_ECTSI)
HSP 1 Score: 300 bits (768), Expect = 3.290e-101
Identity = 142/162 (87.65%), Postives = 147/162 (90.74%), Query Frame = 2
Query: 239 MNLPAGWESGTDATGRTFYMNHETKQTQWNHPADPTPETRPPPSYEPPSKDLYAEQGVVTATAVPAPQYVETVGAQ-RGIE------TGHHPHAGGVVTQQPGPGHTVIVVQEGNRNIPPNAPDGGHWRQERYCGLITWLVALFVVPFIGCCLPCCPCDERT 703
MNLPAGWESGTDATGRTFYMNHET+QTQWNHPADPTPE+RPPPSYEPPS LYAEQGVVTATAV APQYVETVGAQ GI+ GHHP AGGVVT QPGPGHTVIVVQEGNRNIPPNAPDGG W+QERYCGLITWLVALFVVPFIGCC+PCCPCDERT
Sbjct: 1 MNLPAGWESGTDATGRTFYMNHETRQTQWNHPADPTPESRPPPSYEPPSNGLYAEQGVVTATAVTAPQYVETVGAQPAGIQLTTCTQAGHHPQAGGVVTTQPGPGHTVIVVQEGNRNIPPNAPDGGQWKQERYCGLITWLVALFVVPFIGCCMPCCPCDERT 162
BLAST of mRNA_E-fasciculatus_F_contig10071.78.1 vs. uniprot
Match:
A0A6H5JEI3_9PHAE (WW domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEI3_9PHAE)
HSP 1 Score: 275 bits (704), Expect = 1.630e-91
Identity = 128/156 (82.05%), Postives = 134/156 (85.90%), Query Frame = 2
Query: 239 MNLPAGWESGTDATGRTFYMNHETKQTQWNHPADPTPETRPPPSYEPPSKDLYAEQGVVTATAVPAPQYVETVGAQRGIETGHHPHAGGVVTQQPGPGHTVIVVQEGNRNIPPNAPDGGHWRQERYCGLITWLVALFVVPFIGCCLPCCPCDERTV 706
MNLPAGWE G DATGRTFY+NHET+QTQWNHPADPTPE R PPSYEPPS DLY QGV TATAVPAP +V+ VGAQ GI+ GHHPHA VVT QPGPGHTV VV RN PPNAPDGG WRQERYCGLITWLVALFVVPFIGCC+PCCPCDERTV
Sbjct: 1 MNLPAGWEIGKDATGRTFYINHETQQTQWNHPADPTPELRRPPSYEPPSTDLYVAQGVATATAVPAPLFVQAVGAQPGIQAGHHPHASEVVTTQPGPGHTVTVV----RNCPPNAPDGGQWRQERYCGLITWLVALFVVPFIGCCMPCCPCDERTV 152
BLAST of mRNA_E-fasciculatus_F_contig10071.78.1 vs. uniprot
Match:
A0A813G7E1_POLGL (Hypothetical protein n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813G7E1_POLGL)
HSP 1 Score: 60.1 bits (144), Expect = 5.440e-8
Identity = 25/46 (54.35%), Postives = 32/46 (69.57%), Query Frame = 2
Query: 569 IPPNAPDGGHWRQERYCGLITWLVALFVVPFIGCCLPCCPCDERTV 706
+P AP GG+W E+YCG+IT L+AL + PF+ CC PCDER V
Sbjct: 14 VPYGAPPGGYWATEKYCGIITILIALCICPFVCCC----PCDERDV 55
BLAST of mRNA_E-fasciculatus_F_contig10071.78.1 vs. uniprot
Match:
A0A813IVK9_POLGL (Hypothetical protein n=2 Tax=Polarella glacialis TaxID=89957 RepID=A0A813IVK9_POLGL)
HSP 1 Score: 61.6 bits (148), Expect = 1.230e-7
Identity = 32/70 (45.71%), Postives = 42/70 (60.00%), Query Frame = 2
Query: 497 AGGVVTQQPGPGHTVIVVQEGNRNIPPNAPDGGHWRQERYCGLITWLVALFVVPFIGCCLPCCPCDERTV 706
+GG Q PG G+ + V +P AP GG+W E+YCG+IT L+AL + PF+ CC PCDER V
Sbjct: 149 SGGQAMQAPG-GYMLPPVP-----VPYGAPPGGYWATEKYCGIITILIALCICPFVCCC----PCDERDV 208
BLAST of mRNA_E-fasciculatus_F_contig10071.78.1 vs. uniprot
Match:
A0A8D0GBQ8_SPHPU (WW domain-containing protein n=1 Tax=Sphenodon punctatus TaxID=8508 RepID=A0A8D0GBQ8_SPHPU)
HSP 1 Score: 57.4 bits (137), Expect = 1.910e-6
Identity = 31/91 (34.07%), Postives = 47/91 (51.65%), Query Frame = 2
Query: 92 LVPRGQEVIAGGERRVQLVLVP---GGTSEHRKSAD-------IPRAPEAGRDHPQQRAMNLPAGWESGTDATGRTFYMNHETKQTQWNHP 334
L PR + G R+++ +P G E+ + A+ + P+A PQQ + LP GWE D GRT+Y+NHE+++TQW P
Sbjct: 12 LHPRSHKSRVKGHLRLKMTYLPKNNGSEEENTEQAEELEPGWTVLDQPDAACQLPQQESSPLPPGWEERQDLVGRTYYVNHESRRTQWKRP 102
BLAST of mRNA_E-fasciculatus_F_contig10071.78.1 vs. uniprot
Match:
A0A3P9LST0_ORYLA (E3 ubiquitin-protein ligase n=1 Tax=Oryzias latipes TaxID=8090 RepID=A0A3P9LST0_ORYLA)
HSP 1 Score: 57.0 bits (136), Expect = 8.720e-6
Identity = 32/90 (35.56%), Postives = 48/90 (53.33%), Query Frame = 2
Query: 92 LVPRGQEVIAGGERRVQLVLVP--GG----TSEHRKSADI-PRAPEAGRDHPQQRAMNLPAGWESGTDATGRTFYMNHETKQTQWNHPAD 340
L PR + G R+++ +P GG T E R+ A++ + ++G PQQ LP GWE D GRT+Y+NH + TQW P++
Sbjct: 12 LRPRSHKSRVKGYLRLKMAYLPKQGGQEEETGEIREEAEVWDESADSGSQRPQQLLPPLPQGWEEKVDNLGRTYYVNHNNRSTQWKRPSN 101
BLAST of mRNA_E-fasciculatus_F_contig10071.78.1 vs. uniprot
Match:
A0A3P9J8U0_ORYLA (E3 ubiquitin-protein ligase n=1 Tax=Oryzias latipes TaxID=8090 RepID=A0A3P9J8U0_ORYLA)
HSP 1 Score: 57.0 bits (136), Expect = 8.720e-6
Identity = 32/90 (35.56%), Postives = 48/90 (53.33%), Query Frame = 2
Query: 92 LVPRGQEVIAGGERRVQLVLVP--GG----TSEHRKSADI-PRAPEAGRDHPQQRAMNLPAGWESGTDATGRTFYMNHETKQTQWNHPAD 340
L PR + G R+++ +P GG T E R+ A++ + ++G PQQ LP GWE D GRT+Y+NH + TQW P++
Sbjct: 12 LRPRSHKSRVKGYLRLKMAYLPKQGGQEEETGEIREEAEVWDESADSGSQRPQQLLPPLPQGWEEKVDNLGRTYYVNHNNRSTQWKRPSN 101
BLAST of mRNA_E-fasciculatus_F_contig10071.78.1 vs. uniprot
Match:
A0A3B3IGC4_ORYLA (HECT-type E3 ubiquitin transferase n=1 Tax=Oryzias latipes TaxID=8090 RepID=A0A3B3IGC4_ORYLA)
HSP 1 Score: 57.0 bits (136), Expect = 8.950e-6
Identity = 32/90 (35.56%), Postives = 48/90 (53.33%), Query Frame = 2
Query: 92 LVPRGQEVIAGGERRVQLVLVP--GG----TSEHRKSADI-PRAPEAGRDHPQQRAMNLPAGWESGTDATGRTFYMNHETKQTQWNHPAD 340
L PR + G R+++ +P GG T E R+ A++ + ++G PQQ LP GWE D GRT+Y+NH + TQW P++
Sbjct: 144 LRPRSHKSRVKGYLRLKMAYLPKQGGQEEETGEIREEAEVWDESADSGSQRPQQLLPPLPQGWEEKVDNLGRTYYVNHNNRSTQWKRPSN 233
BLAST of mRNA_E-fasciculatus_F_contig10071.78.1 vs. uniprot
Match:
A0A3P9K6X2_ORYLA (HECT-type E3 ubiquitin transferase n=1 Tax=Oryzias latipes TaxID=8090 RepID=A0A3P9K6X2_ORYLA)
HSP 1 Score: 57.0 bits (136), Expect = 8.960e-6
Identity = 32/90 (35.56%), Postives = 48/90 (53.33%), Query Frame = 2
Query: 92 LVPRGQEVIAGGERRVQLVLVP--GG----TSEHRKSADI-PRAPEAGRDHPQQRAMNLPAGWESGTDATGRTFYMNHETKQTQWNHPAD 340
L PR + G R+++ +P GG T E R+ A++ + ++G PQQ LP GWE D GRT+Y+NH + TQW P++
Sbjct: 144 LRPRSHKSRVKGYLRLKMAYLPKQGGQEEETGEIREEAEVWDESADSGSQRPQQLLPPLPQGWEEKVDNLGRTYYVNHNNRSTQWKRPSN 233
BLAST of mRNA_E-fasciculatus_F_contig10071.78.1 vs. uniprot
Match:
A0A8C7YPB7_9TELE (HECT-type E3 ubiquitin transferase n=1 Tax=Oryzias sinensis TaxID=183150 RepID=A0A8C7YPB7_9TELE)
HSP 1 Score: 57.0 bits (136), Expect = 8.960e-6
Identity = 32/90 (35.56%), Postives = 48/90 (53.33%), Query Frame = 2
Query: 92 LVPRGQEVIAGGERRVQLVLVP--GG----TSEHRKSADI-PRAPEAGRDHPQQRAMNLPAGWESGTDATGRTFYMNHETKQTQWNHPAD 340
L PR + G R+++ +P GG T E R+ A++ + ++G PQQ LP GWE D GRT+Y+NH + TQW P++
Sbjct: 144 LRPRSHKSRVKGYLRLKMAYLPKQGGQEEETGEIREEAEVWDESADSGSQRPQQLLPPLPQGWEEKVDNLGRTYYVNHNNRSTQWKRPSN 233
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig10071.78.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90 )
Total hits: 25
0 1 Expect = 3.29e-101 / Id = 87.65 Expect = 1.63e-91 / Id = 82.05 Expect = 5.44e-8 / Id = 54.35 Expect = 1.23e-7 / Id = 45.71 Expect = 1.91e-6 / Id = 34.07 Expect = 8.72e-6 / Id = 35.56 Expect = 8.72e-6 / Id = 35.56 Expect = 8.95e-6 / Id = 35.56 Expect = 8.96e-6 / Id = 35.56 Expect = 8.96e-6 / Id = 35.56 Sequence D8LRX4_ECTSI A0A6H5JEI3_9PHAE A0A813G7E1_POLGL A0A813IVK9_POLGL A0A8D0GBQ8_SPHPU A0A3P9LST0_ORYLA A0A3P9J8U0_ORYLA A0A3B3IGC4_ORYLA A0A3P9K6X2_ORYLA A0A8C7YPB7_9TELE Pages
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Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig10071.78.1
>prot_E-fasciculatus_F_contig10071.78.1 ID=prot_E-fasciculatus_F_contig10071.78.1|Name=mRNA_E-fasciculatus_F_contig10071.78.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=156bp
MNLPAGWESGTDATGRTFYMNHETKQTQWNHPADPTPETRPPPSYEPPSK back to top mRNA from alignment at E-fasciculatus_F_contig10071:146..4728+
Legend: UTR polypeptide CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-fasciculatus_F_contig10071.78.1 ID=mRNA_E-fasciculatus_F_contig10071.78.1|Name=mRNA_E-fasciculatus_F_contig10071.78.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=4583bp|location=Sequence derived from alignment at E-fasciculatus_F_contig10071:146..4728+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)AATTAACGAGGGGTGGAAGGCGAAGCCGGTAAACTTACGTGCCGTGCATC
GTCTCCCGAGCAAGAGCAACGCGTGGCAGCTGTAGAACACTCTCGTTCCG
AGAGGGCAAGAGGTGATCGCGGGCGGCGAGCGGAGAGTTCAGTTAGTTTT
GGTGCCAGGGGGGACCAGCGAGCACCGAAAGAGCGCCGACATACCACGCG
CACCAGAAGCAGGCAGGGACCACCCACAGCAGCGAGCC ATGAACTTGCCA
GCGGGATGGGAAAGCGGGACGGATGCCACCGGACGAACGTTCT GTGAGTT
GCACCCATGCGCTGGAAAGAAGAACGCGGCGGCCAAAATGTGAAAGTATT
CTTATCTCCGTTTTTGCGACCCCAACCAATCCTCCCTCTCAACGGATCAA
GCCCACCTACAGACAGTACCTGCCTCTGAACCAGTGTTGCGCGCTCTCTC
TTGCTGTTTCACAAAGAAAGGAACACGGTAAACATGTAACATTCTGCCAA
CCTCGCCCCCCTCGTTGCCTGTAGCACCATCACCTGTCCAGCACGCTCCA
CTGCAGTAGTACGAACGCTTGACCGTTGAAGAGAAACGCGCACACACGGC
GGTGTAGTACTTGTAGCTATATCTACTGCTGTACGCTGGGTACATGTAGA
ATCGCACCCTAACAGCAGTCGTCCCAGTCTTAGCGGGATATGCCCTCAAT
GGCGGTTCCAAAATCTCGTGGCACGGCTGCACCTGGGGAATCAAACTACT
ACCAGGTGTTGCCTGGAATCCGGTTTAGCGGCGATACCCTCAATAGCGGT
ACTATCCAGTTAGTAGTAATTTGATATTTTGTGACACTATCTTGAAGCAC
TAAACCAGGACCACGACGACTGCTGCTGTGTGCATAGACTAGTCGGAAGC
GGAAGATCCGATGACTCTTAGGCCTTTAGGGCAACATGCGCATATTGAAC
GTGCGTGTTTGGTGAACTGGCCGGTTCATGTTCGACCTCTGAATGTTTGC
CTTCAGTGTTTGCGCTGTTGACCCTTCCTGCATCACTCGAGCCGTACCAC
ACGCATGGTCTACATCGAGGATCACAATCATGTGCAAATTGTGGGTCTCC
TCAAGTAATGTCTTGCGCGTAGTAGTCTATCGGTAATGTCCCCGCCATGA
AATTACCGCCCTGGTGCGCGACACCAAACGCGGAATAATGCAAACACCGA
AGTATTCCGCCTCTCCATGCTAGGTATCACCGCCTAAAATGACAGCTGAT
CTGATCAATGCACTTTCCTCCTCGGCACCAGTGTACATACATCCTGCTGT
TTGCATACCGTAATATCCTTTGGATGCCTTTGGAATGCCTTTGGAATGCC
GTCCGTAGGTTTGTGTGCGAACGCCCCGGGGGGACCCAATAACTCAAAGG
TAGAGGGGCGCAACAAAAAAAGGTAACCCCGGGGCTACCTCAAAGTTTTT
GCTACCCCGGAGTACATATGCATTGTTTTTTTGGGGGGGGGTGCCGCAGT
CGTTGGACCTTTGACCTCGCATCCCTGCACAGCCGGGAGGTAGCGATATG
CCGGGTTCTCACTGGACCAGGCTCTCATATCATAAGCCTCGAAGCGCCGT
GACATATTCGGCGAGTCGCATGGAGGGTACGCTGCATCCTGCTAAGGGTG
TTTTGTTGGGCATCTTGTGCTCAATTCCTTGCACGCGCATGACAGCAACG
AATGGCTTAATTCATTTTCTGGCGCTTTGACTTCAAGAGGCAGCTGTAAG
CACTGTGTAACTGCCTCGAGGGTGCCTGGCCAATTTAACACAACGGTGTG
CGATCATCCCCTTTGCGCGGAGTGAGCGTTCTCGACCCCGCACAAATATT
GTCTACTCGATCACCCTTATGGGTACCGCAAAGCAAAAATACAAGGGCAA
AAAAACAAAGTGGTTATCTGGTTGTCGAGCTCACAAAGCGATCGGTGTGT
TTCAAAGCGTCGTTGCCAAGCGGCAAAAACCCACNNNNNNNNNNGGGGGG
GGCTAACTCATGGTGGGGGGCGCTCTCAAAGGGTACATTACGGTAGGTGG
TCCCAGCGCGTGCCTGCGGCTGCTGATTGCTGCTGCTGCTGCTGCTGCTG
CTGCTGTTGCCTTCGCTCCCGCTGCTGCACTTCTCCTCGTCTTGGTGCAT
GTGCCTCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTCCTGCTGCTACC
GACGTTCCAGACATGAACCACGAAACCAAGCAGACCCAGTGGAACCACCC
GGCCGACCCCACGCCCGAAACACGACCACCGCCGAGCTACGAGCCCCCGA
GCAAGGACCTCTACGCCGAGCAAGGAGTTGTAACCGCCACGGCCGTGCCG
GCACCCCAGTACGTGGAGACAGTCGGAGCACAACGAGGAATTGAG GTACA
GTAAAGAGGGAAGTAGCGCAGTAAAGACTTGTACATTTGTTGTTGTTGGT
TCTTTGAGGTTTGCTGGGCCGTTCGAGGTTGCTGACGGCGGCTGGCAGCT
GATTCACACCAGCATGCACGCTTTACTTTCATCTCGAATCACGCCTTGAT
GACACTGTTCACCACCTTTATGCTTTGGTTAGCCCACTCTGGAGGCGCGC
CTTGTATATATATACCATACTATTTAGTAATAGCACATGTAGGGTGAACT
GACCGTCGTTGCCGTACGGTGAACAGCGGTAGACGCCGTGTACCACCGAT
CGCCAAAGTCAGCGGCCTGCGTTGGCGTTGCAGCTAAGCTTGATACGCAT
GTCTCGACCTAACCTCGTACCTATTGATGCGTGTTTTTTTTCTGGGCCCC
GCCCCCGTCTCTCTCTACGCGGGCCGGATGATTTGACCCCCCAAGTAGTG
CCCGACGGGTTTTAAGCTGCTTGTGATTCCCTATTCTGACCCCCAACCCC
CACGGCTTGTATCATACGGCTTTGGAGCAACTTGCCGCCGGTTTCATCTC
GGGGGCTGTGTGCCGGACTGCTGTAGTAGCACTTCCCAAGTCGGCCTTCG
TTTTCTCTCGACAGGACACGACCTTCGCCTGCGTAAAAAACGGTGTTTTG
AGCAATGTATACAATATATATTGTCGAAGGCTGCCCTTTCGTATATTAAT
GTCTCTCGCTGTGTCGTCGGTTCTCTCGAGCGGAGTGAAGTTACGTTGTC
ATTAACTTGTCGTGCCCCCCCCCCCCCCCCCCCCCCCTTTTTTTACCGCG
ATTTTTTTCCGCGCGCTTCGCCGTCCGGGCCGTCGCCCGAACTATCGTTG
ACCACGCGTACTCAGACCGGTCATCATCCTCACGCCGGCGGGGTGGTCAC
GCAGCAGCCCGGTCCTGGACACACG GTAAGGATGGGTATGGGTATGATGA
TGTTCAATTTGTTACCTAGGCCATCACCTCCTTTTTATTTATCGTCGTTA
CCTTGGTCATGACCTCCATTTTATTGGTCATGACTTGTCGAGTATCATGG
CCATTCATGACCGGGGTGGCGTTCTTGTATATCTAGTGAGATAAACAGTT
GTTGCCAGGAAGCGAGAGAGGGGGGGAGGGAGCAACGGCGTGAAAGGTTT
GAGACCCACACGGCACACGCCATCTGCCATCATCGTAAAGTTGTCATCGC
TTGATCGTCGTCAGAGCCCGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG
GTGTGTAGGAGTGCACATCAGCAGTACCTCCCCCGAGTCTGCCCCCAGCG
TAAGATTCCTCACGAAATAGTCCTCCCCCTGGCCGAAGAAGACGCTGCTG
TACTGCATATGTATTCCCCCCGAAGAAGACCACAACATAAAAAAAAGCAA
GCAGACCAGATTGTGATTTGTCTACCCCTGCTTTCTTTCCGGTCTGCTGG
GCCGCCTCAGGAGCCCCCCCCCCATCCCCCACCCCCCAGCTCCAAACCCA
GCTCAGTTCTTGCCGCGTCGCCGCCCAGGAAAACAATCTGCTTGTAGAAC
ATAGGCACCATGTTTATGACGATAACGTTCAAAAGTCATTCACTGTCGTT
CGGGGGGGGGGGCAGGGGGCTCGGGGCAGTGATGTTGGGTTTAGGGGGCT
GGGCCGCGGATGCCCCCCACCGGGAGTATTCCTGCTCGCCGAGCCCCCCG
TAGTCCTCTTCAAGTGGAGGACTGCCACCCCCCTCGGGAAAATGTTAAGG
TGCAAAAATAAAGTTGACAAGATGGCGCGGATGGACCTCCCGCCCTGCCG
CCGCCCCCCCTCGGTAGCAACAAAAGTAGGTACCCCCCGGCGTTGTGCCC
GCTTTGGGTGTCACATATCCCAAAAAAATGACCATGTCTGGGAAGTTCGG
TTGGGCAAAGTGGGTTTCGTCTTGTCGTTTGAGCGAACAAAGGCAGCGAG
TGAACATGGGGGCGAAAACATTACTCAAACACAGCAGCACGGAACGGCAC
GCGGTCGAAAAACAGGTGATTGTGGTGCAGGAGGGGAATCGGAATATCCC
GCCGAACGCGCCGGATGGTGGCCATTGGAGGCAGGAGAGGTACTGCGGGC
TCATCACGTGGCTGGTCGCCCTCTTCGTTGTCCCGTTCATCGGCTGCTGC
CTCCCCTGTTGTCCTTGTGACGAGCGGACAGTG back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig10071:146..4728+
>mRNA_E-fasciculatus_F_contig10071.78.1 ID=mRNA_E-fasciculatus_F_contig10071.78.1|Name=mRNA_E-fasciculatus_F_contig10071.78.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=936bp|location=Sequence derived from alignment at E-fasciculatus_F_contig10071:146..4728+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female) back to top