prot_E_fasciculatus_S2_contig948.17512.1 (polypeptide) Ectocarpus fasciculatus EfasUO2

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E_fasciculatus_S2_contig948.17512.1
Unique Nameprot_E_fasciculatus_S2_contig948.17512.1
Typepolypeptide
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Sequence length497
Homology
BLAST of mRNA_E_fasciculatus_S2_contig948.17512.1 vs. uniprot
Match: D8LM84_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LM84_ECTSI)

HSP 1 Score: 477 bits (1227), Expect = 9.740e-148
Identity = 305/343 (88.92%), Postives = 310/343 (90.38%), Query Frame = 0
Query:  165 NETTDGIPGGTDDGPAFEYKDKVGDLDKDAAGPAAAAPGGAVQAQREDDQPRKDAALEAGLASLDMEDDSPTPFGDVVTLMLSQLRRKDNKFGRAAASSLAALLDAFPECCVYDLVAPTLLDLAGLDGAAXXXXXXXXXXXXXXXKEDPIMQARAVACLAAAWPRVPAPXXXXXXXXXXXXXXXXXXXXXXXG-----------RTDAVCNVQRAHAASLTRALSGAILLKVWSVRVPIYGALSAIVSRTTTAAESRAPVLTGSLLADVVQAVELGADDAKYSQVRAAAISVVGAMTCRKELRLALMPHKEGLAAAARTAAQDPEPKVAVVGSKAAQNLSWWP 496
            NE TDG PGGTDDGPAFEYKDKVGDLD+DAAGPAAAAPG AVQAQRED QPRKDAALEAGLASLDMEDDSPTPFGDVV LMLSQLRRKD KFGRAAASSLA LLDAFPECCVYDLVAPTLL+LAGLDGAA  XXXXXXXXXXX     PIMQARAVACLAAAWPRVPA XXXXXXXXXXXXXXXXXXXXXXX            R DAVCNVQRAHAASLTR LSGAILLKVWSVRVPIYGALSAIVSRTT AAESRAPVLTGSLLADVV+AVELGA+DAKYSQVRAAAISVVGAMTCRKELRLAL PHKEGLA AARTAA+DPEPKVAV GSKAAQNLSWWP
Sbjct: 1946 NEATDGTPGGTDDGPAFEYKDKVGDLDRDAAGPAAAAPGEAVQAQREDGQPRKDAALEAGLASLDMEDDSPTPFGDVVALMLSQLRRKDTKFGRAAASSLAVLLDAFPECCVYDLVAPTLLELAGLDGAAAGXXXXXXXXXXX-----PIMQARAVACLAAAWPRVPAXXXXXXXXXXXXXXXXXXXXXXXXXXXARQADATTTRIDAVCNVQRAHAASLTRVLSGAILLKVWSVRVPIYGALSAIVSRTTAAAESRAPVLTGSLLADVVRAVELGAEDAKYSQVRAAAISVVGAMTCRKELRLALTPHKEGLAGAARTAAEDPEPKVAVEGSKAAQNLSWWP 2283          
BLAST of mRNA_E_fasciculatus_S2_contig948.17512.1 vs. uniprot
Match: A0A836CAR0_9STRA (Proteasome stabiliser-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAR0_9STRA)

HSP 1 Score: 91.7 bits (226), Expect = 1.180e-15
Identity = 172/522 (32.95%), Postives = 222/522 (42.53%), Query Frame = 0
Query:    1 MLPAILAEVSRAISSVSRVTKRQGCSGLKDLASILGPSLGEESSGRRLIRRVLSQVPGRTWEGKEELLEAVVALCAAGKGSAITLEPFVWGGEGXXXXXXXXXXGVKRNXXXXXXXXXXXXXXXXXXXXXSSSGQLEE---SSSATAGAEGIVRGTDGAASSSSDGDNETTDGIPGGTDDGPAFEYKDKVGDLDKDAAGPAAAAPGGAVQAQREDDQPRKDAALEAGLASLDMEDDSPTP----FGDVVTLMLSQLRRKDNKFGRAAASSLAALLDAFPECCVYDLVAPTLLDLAGLDGAAXXXXXXXXXXXXXXXKED----------------PIMQARAVACLAAAWPRVPAPXXXXXXXXXXXXXXXXXXXXXXXGRTDAVCNVQRAHAASLTRALSGAILLKVWSVRVPIYGALSAIVSRTTTAA--ESRAPVLTGSLLADVVQAVEL--GADDAKYSQVRAAAISVVGAMTCRKELR---LALMPHKEGLAAAARTAAQDPEPKVAVVGSKAAQNL 492
            +L  I AE+  A+   SR  + +  +         G  LGE+++G  ++  +L  VPGR WE KE LLEAVV +    +G    +E  + G EGXXXXXXXXXX     XXXXXXX               +    E    S +AT+G E                +    DG  GG+    A  Y+DK+GDL              A +A+  D              +   +  +P P    +G+VV L++ QL R+     RAAASS+AAL  AFPEC  +   APTLL  A L    XXXXXXXXXXXXXXX                   P+MQARAV  L AAWPR                           G                    + A+  +VWSVRV +   +  I+     AA  ++ A    G  L  V  AV    G  D KYS VR AA     A+          L+L+P KE L   AR AA D +  VA +G+KA Q L
Sbjct: 1986 LLAPIAAEIVGALGGTSRGGRLRAAAAXXXXXXXXGARLGEDAAGAEVLGALLRAVPGRAWERKEALLEAVVKVAVECRGG---MELSMRGAEGXXXXXXXXXXXXXXXXXXXXXXAELESDAPGAVNNGVADAPAEAGGGSGAATSGTEDXXXXXXXXXXXXXXXE----DGADGGS---AAAAYEDKLGDL--------------AAEAEPMDXXXXXXXXXXXXXGA--QQAAAPAPPRIAYGEVVGLLVRQLGRQSKLVRRAAASSVAALAPAFPECDTFAAAAPTLLRAALLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPVMQARAVEALTAAWPR---------------------------GAGGXXXXXXXXXXXXXXXXXAAALPTRVWSVRVQLLRLIKTILEAGFGAATADAAAAASCGRALPAVAPAVASAGGIGDLKYSAVRVAAAEAALALASVSPAGPGGLSLVPFKEALQDVARVAAADGDASVASLGAKAQQAL 2454          
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig948.17512.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LM84_ECTSI9.740e-14888.92Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836CAR0_9STRA1.180e-1532.95Proteasome stabiliser-domain-containing protein n=... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR024372Proteasome component Ecm29PANTHERPTHR23346:SF19PROTEASOME ADAPTER AND SCAFFOLD PROTEIN ECM29coord: 2..451
NoneNo IPR availablePANTHERPTHR23346TRANSLATIONAL ACTIVATOR GCN1-RELATEDcoord: 2..451
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 10..490

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig948contigE_fasciculatus_S2_contig948:5056..8164 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO22022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig948.17512.1mRNA_E_fasciculatus_S2_contig948.17512.1Ectocarpus fasciculatus EfasUO2mRNAE_fasciculatus_S2_contig948 4411..8645 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E_fasciculatus_S2_contig948.17512.1 ID=prot_E_fasciculatus_S2_contig948.17512.1|Name=mRNA_E_fasciculatus_S2_contig948.17512.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=497bp
MLPAILAEVSRAISSVSRVTKRQGCSGLKDLASILGPSLGEESSGRRLIR
RVLSQVPGRTWEGKEELLEAVVALCAAGKGSAITLEPFVWGGEGGGGGGE
ASSRGVKRNRTSELEDEEEHDGEAVAATAQSSSGQLEESSSATAGAEGIV
RGTDGAASSSSDGDNETTDGIPGGTDDGPAFEYKDKVGDLDKDAAGPAAA
APGGAVQAQREDDQPRKDAALEAGLASLDMEDDSPTPFGDVVTLMLSQLR
RKDNKFGRAAASSLAALLDAFPECCVYDLVAPTLLDLAGLDGAAAAAAAA
AAGTTSGGGKEDPIMQARAVACLAAAWPRVPAPPASPSAPAPDAGAAAAA
AAAAAAGRTDAVCNVQRAHAASLTRALSGAILLKVWSVRVPIYGALSAIV
SRTTTAAESRAPVLTGSLLADVVQAVELGADDAKYSQVRAAAISVVGAMT
CRKELRLALMPHKEGLAAAARTAAQDPEPKVAVVGSKAAQNLSWWP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR016024ARM-type_fold
IPR024372Ecm29