mRNA_E_fasciculatus_S2_contig9471.17504.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig9471.17504.1 vs.
Match: Peptidase_M3 (domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LMM4_9PHAE) HSP 1 Score: 472 bits (1214), Expect = 1.700e-163 Identity = 235/243 (96.71%), Postives = 236/243 (97.12%), Query Frame = 1
Query: 112 ERSGKGEQDDGRLMSHSEVETLFHEFGHALHSLLSRTELQHVSGTRVPVDFCEIPSHLMEHFVWDRTMLTKFARHYRTGEAPPPALLDGLHRSKTLFAGLGIQTQLLYATLDQQLFGPQPEGGVWSSASVADALQERIAGLPRCEGAFWHSRFGHFTGYGASYYAYLYAKMFTSAIWERHFVKDPLNSDAGELLWKELLIHGGAKDPHEMLRVLLGEEQGSGGDAGLRAGVASLLKDTGAVAT 840
ER GK D GRLMSHSEVETLFHEFGHALHSLLSRTELQHVSGTRVPVDFCEIPSHLMEHFVWDRTMLTKFARHYRTGEAPP ALLDGLHRSKTLFAGLGIQTQLLYATLDQQLFGPQPEGGVWSSASVADALQERIAGLPRCEGAFWHSRFGHFTGYGASYYAYLYAKMFTSAIWERHF +DPLNSDAGELLWKELLIHGGAKDPHEMLRVLLGEEQGSGGDAGLRAGVASLLKDTGAVAT
Sbjct: 2 ERFGK---DGGRLMSHSEVETLFHEFGHALHSLLSRTELQHVSGTRVPVDFCEIPSHLMEHFVWDRTMLTKFARHYRTGEAPPAALLDGLHRSKTLFAGLGIQTQLLYATLDQQLFGPQPEGGVWSSASVADALQERIAGLPRCEGAFWHSRFGHFTGYGASYYAYLYAKMFTSAIWERHFARDPLNSDAGELLWKELLIHGGAKDPHEMLRVLLGEEQGSGGDAGLRAGVASLLKDTGAVAT 241
BLAST of mRNA_E_fasciculatus_S2_contig9471.17504.1 vs.
Match: Mitochondrial (intermediate peptidase (N-terminal) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXL4_ECTSI) HSP 1 Score: 456 bits (1172), Expect = 5.310e-149 Identity = 239/279 (85.66%), Postives = 245/279 (87.81%), Query Frame = 1
Query: 4 HGTLT*LQYQLPTVVLVCNFGLPEPPPHGGNWEQSKERSGKGEQDDGRLMSHSEVETLFHEFGHALHSLLSRTELQHVSGTRVPVDFCEIPSHLMEHFVWDRTMLTKFARHYRTGEAPPPALLDGLHRSKTLFAGLGIQTQLLYATLDQQLFGPQPEGGVWSSASVADALQERIAGLPRCEGAFWHSRFGHFTGYGASYYAYLYAKMFTSAIWERHFVKDPLNSDAGELLWKELLIHGGAKDPHEMLRVLLGEEQGSGGDAGLRAGVASLLKDTGAVAT 840
H T+ YQLPTVVLVCNFGLPEPPP GGN +QSKERSGK DDGRLMSHSEVETLFHEFGHALHSLLSRTELQHVS + +P + H V R L + RHYRTGEAPPPALLDGLHRSKTLFAGLGIQTQLLYATLDQQLFG QPEGGVWSSASVADALQERIAGLPRCEGAFWHSRFGHFTGYGASYYAYLYAKMFTSAIWERHF KDPLNSDAGELLWKELLIHGGAKDPHEMLRVLLGEEQGSGGDAGLRAGV SLLKDTGAVAT
Sbjct: 552 HFTVRCGCYQLPTVVLVCNFGLPEPPPDGGNAKQSKERSGK---DDGRLMSHSEVETLFHEFGHALHSLLSRTELQHVSAS--------VPDAV--HRV--RRGLRQQRRHYRTGEAPPPALLDGLHRSKTLFAGLGIQTQLLYATLDQQLFGRQPEGGVWSSASVADALQERIAGLPRCEGAFWHSRFGHFTGYGASYYAYLYAKMFTSAIWERHFAKDPLNSDAGELLWKELLIHGGAKDPHEMLRVLLGEEQGSGGDAGLRAGVTSLLKDTGAVAT 815
BLAST of mRNA_E_fasciculatus_S2_contig9471.17504.1 vs.
Match: Peptidase_M3 (domain-containing protein n=20 Tax=Phytophthora TaxID=4783 RepID=G5AB65_PHYSP) HSP 1 Score: 245 bits (626), Expect = 1.430e-69 Identity = 123/249 (49.40%), Postives = 161/249 (64.66%), Query Frame = 1
Query: 28 YQLPTVVLVCNFGLPEPPPHGGNWEQSKERSGKGEQDDGRLMSHSEVETLFHEFGHALHSLLSRTELQHVSGTRVPVDFCEIPSHLMEHFVWDRTMLTKFARHYRTGEAPPPALLDGLHRSKTLFAGLGIQTQLLYATLDQQLFGPQP-EGGVWSSASVADALQERIAGLPRCEGAFWHSRFGHFTGYGASYYAYLYAKMFTSAIWERHFV--KDPLNSDAGELLWKELLIHGGAKDPHEMLRVLLGEE 765
YQ P V LVCNF P P D L++H+EVETLFHEFGHA+HSLLSRTE QH+SGTR +DF E PSHL E+F WD ++++FA HYRTG P +++ GL SKT+FA + QTQ LY+ LD QLFG QP ++ + LQ +P +G +WH+RFGH GYGA YY+YLYA++F + IW +F K PLN AGE L+++L++HGGAKDP+++L +LG E
Sbjct: 463 YQKPIVALVCNFNKPAP-------------------DSPSLLTHAEVETLFHEFGHAMHSLLSRTEFQHLSGTRATLDFVETPSHLFEYFAWDYRVVSEFAHHYRTGAPLPASMMQGLRASKTMFAAMDTQTQCLYSMLDLQLFGEQPLPCSPHTTTQMLHELQNSSTLVPHVDGTYWHTRFGHLIGYGAGYYSYLYARVFAADIWHTNFAGPKGPLNRAAGEKLYQKLMVHGGAKDPNDLLVEMLGRE 692
BLAST of mRNA_E_fasciculatus_S2_contig9471.17504.1 vs.
Match: Peptidase_M3 (domain-containing protein (Fragment) n=1 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A421FFW1_9STRA) HSP 1 Score: 242 bits (617), Expect = 3.180e-69 Identity = 123/246 (50.00%), Postives = 159/246 (64.63%), Query Frame = 1
Query: 28 YQLPTVVLVCNFGLPEPPPHGGNWEQSKERSGKGEQDDGRLMSHSEVETLFHEFGHALHSLLSRTELQHVSGTRVPVDFCEIPSHLMEHFVWDRTMLTKFARHYRTGEAPPPALLDGLHRSKTLFAGLGIQTQLLYATLDQQLFGPQPEGGVW-SSASVADALQERIAGLPRCEGAFWHSRFGHFTGYGASYYAYLYAKMFTSAIWERHFVKD-PLNSDAGELLWKELLIHGGAKDPHEMLRVLLG 759
YQ P V LVCNF P P D L++H+EVETLFHEFGHA+HSLLSRTE QH+SGTR +DF E PSHL E+F WD ++ +F+ HY+TG P A++ GL SKT+FA + QTQ LY+ LD QLFG QP ++ + LQ +P +G FWH+RFGH GYGA YY+YLYA++F + IW F + PLN DAGE L+++L++HGGAKDP+E+L +LG
Sbjct: 354 YQKPIVALVCNFNKPAP-------------------DSPSLLTHAEVETLFHEFGHAMHSLLSRTEFQHLSGTRAALDFVETPSHLFEYFAWDYRVVQEFSSHYKTGHPLPAAMMQGLRSSKTMFAAMDTQTQCLYSILDLQLFGEQPLPCTPPTTTQMLHELQNSSTLVPHVDGTFWHTRFGHLIGYGAGYYSYLYARVFAADIWHSCFGRQGPLNRDAGERLYQKLMVHGGAKDPNELLVDILG 580
BLAST of mRNA_E_fasciculatus_S2_contig9471.17504.1 vs.
Match: Peptidase_M3 (domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X1H8_GLOUD) HSP 1 Score: 243 bits (621), Expect = 5.390e-69 Identity = 123/248 (49.60%), Postives = 159/248 (64.11%), Query Frame = 1
Query: 25 QYQLPTVVLVCNFGLPEPPPHGGNWEQSKERSGKGEQDDGRLMSHSEVETLFHEFGHALHSLLSRTELQHVSGTRVPVDFCEIPSHLMEHFVWDRTMLTKFARHYRTGEAPPPALLDGLHRSKTLFAGLGIQTQLLYATLDQQLFGPQP-EGGVWSSASVADALQERIAGLPRCEGAFWHSRFGHFTGYGASYYAYLYAKMFTSAIWERHFVKDPLNSDAGELLWKELLIHGGAKDPHEMLRVLLGEE 765
+YQ P V LVCNF P P + S L++HSEVETLFHEFGHA+HSLLSRTE QH+SGTR +DF E PSHL E+F WD + +FARHY T E P ++ GL SK +FA + QTQ LY+ LD ++F QP ++ + LQ +P +G FWH+RFGH GYGA YY+YLY++MF S IW F +P+N+DAG+ L+KEL+IHGGAKDP+EML ++G +
Sbjct: 444 KYQKPIVALVCNFSKPAP------YSPS-------------LLTHSEVETLFHEFGHAMHSLLSRTEFQHLSGTRAQLDFVETPSHLFEYFAWDYRFVREFARHYETNEPIPHDMMVGLKMSKNMFAAMDTQTQCLYSLLDLKIFSEQPLPYDPSTTTEILKQLQNVSTLVPHVDGTFWHTRFGHLIGYGAGYYSYLYSRMFASDIWHACFSDNPINADAGDKLYKELMIHGGAKDPNEMLLTMIGRK 672
BLAST of mRNA_E_fasciculatus_S2_contig9471.17504.1 vs.
Match: Uncharacterized (protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FJW8_PYTOL) HSP 1 Score: 243 bits (620), Expect = 1.210e-68 Identity = 121/247 (48.99%), Postives = 155/247 (62.75%), Query Frame = 1
Query: 25 QYQLPTVVLVCNFGLPEPPPHGGNWEQSKERSGKGEQDDGRLMSHSEVETLFHEFGHALHSLLSRTELQHVSGTRVPVDFCEIPSHLMEHFVWDRTMLTKFARHYRTGEAPPPALLDGLHRSKTLFAGLGIQTQLLYATLDQQLFGPQPEGGVWSSASVADALQERIAGLPRCEGAFWHSRFGHFTGYGASYYAYLYAKMFTSAIWERHFVKDPLNSDAGELLWKELLIHGGAKDPHEMLRVLLGEE 765
+YQ P V LVCNF P P L++HSEVETLFHEFGH +HS+LSRTE QH SGTR +DF E PSHL E+F WD ++ +FARH+RT E P +++ L +SK +F+ + QTQ LY+ LD LFGPQ G S+ LQ +P G +WH+RFGH GYGA YY+YLY+ +F S IW F DPLN +AG+ L++ L+ HGGAKDP+EMLR L+G+E
Sbjct: 473 EYQTPLVALVCNFNKPAPSAP-------------------TLLNHSEVETLFHEFGHVMHSMLSRTEFQHFSGTRTAMDFVETPSHLFEYFAWDYRVVREFARHHRTNEPIPREMMESLRQSKHMFSAMDTQTQCLYSLLDLSLFGPQK--GASSTTETLKQLQNEHTLVPYVPGTYWHTRFGHLVGYGAGYYSYLYSHVFASDIWTSVFQSDPLNKEAGQRLYQNLMAHGGAKDPNEMLRSLIGKE 698
BLAST of mRNA_E_fasciculatus_S2_contig9471.17504.1 vs.
Match: Mitochondrial (intermediate peptidase, putative (Fragment) n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C4N3_PYTIN) HSP 1 Score: 239 bits (609), Expect = 1.480e-68 Identity = 123/252 (48.81%), Postives = 160/252 (63.49%), Query Frame = 1
Query: 25 QYQLPTVVLVCNFGLPEPPPHGGNWEQSKERSGKGEQDDGRLMSHSEVETLFHEFGHALHSLLSRTELQHVSGTRVPVDFCEIPSHLMEHFVWDRTMLTKFARHYRTGEAPPPALLDGLHRSKTLFAGLGIQTQLLYATLDQQLFGPQPEGGVWSSASVADAL----QERIAGLPRCEGAFWHSRFGHFTGYGASYYAYLYAKMFTSAIWERHFVKDPLNSDAGELLWKELLIHGGAKDPHEMLRVLLGEEQ 768
+YQ P V LVCNF +P PH + L+SHSEVETLFHEFGHALHSLLSRTE QH+SGTR +DF E PSHL E+F WD ++ +FARH+ TGEA P ++ L +SK +FA + QTQ LY+ LD QLFG +S + + AL Q + +P EG WH+RFGH GYGA YY+YLY+++F SAIW+ F PL+ AG+ L +L+IHGGA+ P E+L L+G+ +
Sbjct: 296 RYQKPLVALVCNFN--KPAPHAPS-----------------LLSHSEVETLFHEFGHALHSLLSRTEFQHLSGTRASLDFVETPSHLFEYFAWDYRVVREFARHHATGEALPEEMMTRLKQSKHMFAAMDAQTQCLYSLLDLQLFGASANSSSDASTTXSTALLRDLQNKHTLVPHVEGTCWHTRFGHLVGYGAGYYSYLYSRVFASAIWQHRFAAAPLSRSAGQELHDQLMIHGGARAPQEILTALVGQRE 528
BLAST of mRNA_E_fasciculatus_S2_contig9471.17504.1 vs.
Match: Peptidase_M3 (domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3HCI0_PHYRM) HSP 1 Score: 246 bits (629), Expect = 7.150e-68 Identity = 123/249 (49.40%), Postives = 163/249 (65.46%), Query Frame = 1
Query: 28 YQLPTVVLVCNFGLPEPPPHGGNWEQSKERSGKGEQDDGRLMSHSEVETLFHEFGHALHSLLSRTELQHVSGTRVPVDFCEIPSHLMEHFVWDRTMLTKFARHYRTGEAPPPALLDGLHRSKTLFAGLGIQTQLLYATLDQQLFGPQPEGGVW-SSASVADALQERIAGLPRCEGAFWHSRFGHFTGYGASYYAYLYAKMFTSAIWERHFV--KDPLNSDAGELLWKELLIHGGAKDPHEMLRVLLGEE 765
YQ P V LVCNF P P D L++H+EVETLFHEFGHA+HSLLSRTE QH+SGTR +DF E PSHL E+F WD ++++FA HYRTG PPA++ GL SKT+FA + QTQ LY+ LD QLFG QP + ++ + LQ +P +G +WH+RFGH GYGA YY+YLYA++F + IW +F+ + PLN +GE L+++L++HGGAKDP+ +L +LG E
Sbjct: 881 YQKPIVALVCNFNKPAP-------------------DSPSLLTHAEVETLFHEFGHAMHSLLSRTEFQHLSGTRAALDFVETPSHLFEYFAWDHRVVSEFAHHYRTGAPLPPAMMQGLRASKTMFAAMDTQTQCLYSMLDLQLFGEQPLPCMPPTTTQMLHELQNSSTLVPHVDGTYWHTRFGHLIGYGAGYYSYLYARVFAADIWHTNFIGAQGPLNRKSGEQLYQKLMVHGGAKDPNALLVDMLGRE 1110
BLAST of mRNA_E_fasciculatus_S2_contig9471.17504.1 vs.
Match: Mitochondrial (intermediate peptidase n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TEG5_9STRA) HSP 1 Score: 241 bits (614), Expect = 1.560e-67 Identity = 121/246 (49.19%), Postives = 160/246 (65.04%), Query Frame = 1
Query: 28 YQLPTVVLVCNFGLPEPPPHGGNWEQSKERSGKGEQDDGRLMSHSEVETLFHEFGHALHSLLSRTELQHVSGTRVPVDFCEIPSHLMEHFVWDRTMLTKFARHYRTGEAPPPALLDGLHRSKTLFAGLGIQTQLLYATLDQQLFGPQPEGGVWSSASVADALQERIAGLPRCEGAFWHSRFGHFTGYGASYYAYLYAKMFTSAIWERHFVKDPLNSDAGELLWKELLIHGGAKDPHEMLRVLLGEE 765
YQLP V LVCNF +P +G L++H+E+E LFHEFGHALHSLLSRT QHV+GTR PVDF E PSHL+E+FVWD+ +L +FA H++TG P L L +K F+GL Q Q+LY+ +DQ+LFGPQP ++++ ++QE++ +P EGA WH+RFGH TGYGA YY YLY ++F S + + +AGE LWKE+L+HGG KDP +LR +LGEE
Sbjct: 500 YQLPVVALVCNFSPCDP-------------AGPV------LLTHAELEALFHEFGHALHSLLSRTRFQHVAGTRAPVDFVETPSHLLEYFVWDQRVLAQFAHHHQTGRPIPAELTAALRAAKREFSGLDTQIQVLYSLVDQKLFGPQPLAEDPTTSAFLASVQEKVMQMPHSEGAVWHARFGHLTGYGAGYYGYLYDRVFASHLXXXXXXXXXXSREAGERLWKEMLVHGGGKDPCHILRDVLGEE 726
BLAST of mRNA_E_fasciculatus_S2_contig9471.17504.1 vs.
Match: Zincin-like (metalloproteases family protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1HTE0_KLENI) HSP 1 Score: 242 bits (617), Expect = 1.970e-67 Identity = 127/255 (49.80%), Postives = 169/255 (66.27%), Query Frame = 1
Query: 28 YQLPTVVLVCNFGLPEPPPHGGNWEQSKERSGKGEQDDGRLMSHSEVETLFHEFGHALHSLLSRTELQHVSGTRVPVDFCEIPSHLMEHFVWDRTMLTKFARHYRTGEAPPPALLDGLHRSKTLFAGLGIQTQLLYATLDQQLFGPQPEGGVWSSASVADALQERIAGLPRCEGAFWHSRFGHFTGYGASYYAYLYAKMFTSAIWERHFVKDPLNSDAGELLWKELLIHGGAKDPHEMLRVLLGE----EQGSGG 780
+QLP V LVCN PPP G L+SH EVET+FHEFGHALH+LLSRTE QH+SGTR +DF E PS+L+E FV D +L FARHY TGEA PP ++ GL +SK +F+ + +Q Q++Y+ +DQ FGPQ GGV ++A +A LQE+ + EG W +RF H GYGA YY+YLYAK F+S +W ++F DPLN +AGE+L +++L +GG++DP +L+ +LGE E GSGG
Sbjct: 578 WQLPAVALVCNL----PPPQNGAPS---------------LLSHGEVETMFHEFGHALHTLLSRTEYQHLSGTRGKLDFIETPSNLLELFVDDHRVLRHFARHYSTGEAIPPEVVSGLRQSKRMFSAMDLQVQVVYSLMDQAFFGPQSVGGVDTTAVIAQ-LQEQHTPIGHVEGTCWQARFNHLVGYGAGYYSYLYAKAFSSELWAQYFAADPLNREAGEMLRRDVLQYGGSRDPLRILKHVLGEHSMKETGSGG 812 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig9471.17504.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig9471.17504.1 >prot_E_fasciculatus_S2_contig9471.17504.1 ID=prot_E_fasciculatus_S2_contig9471.17504.1|Name=mRNA_E_fasciculatus_S2_contig9471.17504.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=231bp MSHSEVETLFHEFGHALHSLLSRTELQHVSGTRVPVDFCEIPSHLMEHFVback to top mRNA from alignment at E_fasciculatus_S2_contig9471:240..5858- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig9471.17504.1 ID=mRNA_E_fasciculatus_S2_contig9471.17504.1|Name=mRNA_E_fasciculatus_S2_contig9471.17504.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=5619bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig9471:240..5858- (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig9471:240..5858- >mRNA_E_fasciculatus_S2_contig9471.17504.1 ID=mRNA_E_fasciculatus_S2_contig9471.17504.1|Name=mRNA_E_fasciculatus_S2_contig9471.17504.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=693bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig9471:240..5858- (Ectocarpus fasciculatus EfasUO2)back to top |