mRNA_E_fasciculatus_S2_contig945.17482.1 (mRNA) Ectocarpus fasciculatus EfasUO2
|
Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig945.17482.1 vs.
Match: MND1 (family n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LRU4_ECTSI) HSP 1 Score: 367 bits (942), Expect = 2.000e-121 Identity = 191/202 (94.55%), Postives = 195/202 (96.53%), Query Frame = 1
Query: 304 MGKRGLSVEEKRDKVLDIYHSTKAIYSLKEIEKAASKQGVTVNTVKEVNQSLVDDGLVDMDKIGASNFFWSFPSKVAVTKQNVVDNLEQSIAKAEDNTATNKRKISELEEGRADTASRREKLGRLQENGLRLQELDMEYESLKENDPAELEKVTRLTQVCKDGVNRWTDNSWCIKSXMVKTKGMSGKDVDKYLQIKGDFDQV 909
M KRGLSVEEKRDKVLDIYHSTKAIYSLKEIEKAASKQGVT+NTVK+VNQSLVDDGLVDMDKIGASNFFWSFPSKVAVTKQNVVDNLEQSIAKAEDNTA NKRK SELEEGRADTASRREKLGRLQENGLRLQEL+ EYESLKENDPAELEKV RLTQVCKDGVNRWTDNSWCIKS MVKTKGMSGKDVD+YLQIKGDFD V
Sbjct: 1 MVKRGLSVEEKRDKVLDIYHSTKAIYSLKEIEKAASKQGVTINTVKDVNQSLVDDGLVDMDKIGASNFFWSFPSKVAVTKQNVVDNLEQSIAKAEDNTAANKRKFSELEEGRADTASRREKLGRLQENGLRLQELEKEYESLKENDPAELEKVARLTQVCKDGVNRWTDNSWCIKSWMVKTKGMSGKDVDRYLQIKGDFDLV 202
BLAST of mRNA_E_fasciculatus_S2_contig945.17482.1 vs.
Match: Meiotic (nuclear division protein 1 n=1 Tax=Undaria pinnatifida TaxID=74381 RepID=F5BX17_UNDPI) HSP 1 Score: 285 bits (728), Expect = 2.430e-89 Identity = 145/202 (71.78%), Postives = 171/202 (84.65%), Query Frame = 1
Query: 304 MGKRGLSVEEKRDKVLDIYHSTKAIYSLKEIEKAASKQGVTVNTVKEVNQSLVDDGLVDMDKIGASNFFWSFPSKVAVTKQNVVDNLEQSIAKAEDNTATNKRKISELEEGRADTASRREKLGRLQENGLRLQELDMEYESLKENDPAELEKVTRLTQVCKDGVNRWTDNSWCIKSXMVKTKGMSGKDVDKYLQIKGDFDQV 909
M K+GLS+EEKR K+L+IYH TK+I+SLKEIEKAASKQGV T+K+VNQSLVDDGLVDMDKIG SNFFWSFPSK V +QN++D+L++ IAKAED A NKRKI+ L E RADT R+ KL RLQ+N R+++L+ EYE+LKENDPAELEKVT + +VCKDGVNRWTDN+W IKS MVKT+GMSG DVDKYLQIK DFD V
Sbjct: 1 MVKKGLSLEEKRAKILNIYHGTKSIFSLKEIEKAASKQGVVSQTIKDVNQSLVDDGLVDMDKIGPSNFFWSFPSKAVVDRQNLIDSLKRDIAKAEDTAAVNKRKIASLVEERADTEERQLKLRRLQDNKQRVKQLESEYETLKENDPAELEKVTNVAEVCKDGVNRWTDNTWSIKSWMVKTRGMSGADVDKYLQIKADFDHV 202
BLAST of mRNA_E_fasciculatus_S2_contig945.17482.1 vs.
Match: Hypothetical (protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XYC3_9STRA) HSP 1 Score: 198 bits (504), Expect = 3.080e-56 Identity = 103/201 (51.24%), Postives = 143/201 (71.14%), Query Frame = 1
Query: 310 KRGLSVEEKRDKVLDIYHSTKAIYSLKEIEKAASKQGVTVNTVKEVNQSLVDDGLVDMDKIGASNFFWSFPSKVAVTKQNVVDNLEQSIAKAEDNTATNKRKISELEE-GRADTASRREKLGRLQENGLRLQELDMEYESLKENDPAELEKVTRLTQVCKDGVNRWTDNSWCIKSXMVKTKGMSGKDVDKYLQIKGDFDQV 909
++GLS+EEKR ++L IYHS+ +Y+LKEIEK ASK GV + T+K+VNQSL+DD LVD DKIG++NFFWSFPSKV V K+ +++L++ I ++ + K+++LE GR D+ +RRE L +L + R ELD + LKENDP EL ++ L + K+ VNRWTDN W +KS VK KGM KDVD+Y+Q+ DFD +
Sbjct: 5 RKGLSLEEKRQRILGIYHSSGEVYNLKEIEKIASKAGVVLQTIKDVNQSLIDDHLVDADKIGSANFFWSFPSKVYVVKKTKIESLQKQIEDSKRQLNAAQDKVADLENAGRQDSNTRREGLAKLDQERKRGSELDERLQCLKENDPEELLRLKNLQEEIKEHVNRWTDNIWAVKSWCVKKKGMPSKDVDRYMQLPQDFDYI 205
BLAST of mRNA_E_fasciculatus_S2_contig945.17482.1 vs.
Match: Uncharacterized (protein n=24 Tax=Phytophthora TaxID=4783 RepID=H3HEE5_PHYRM) HSP 1 Score: 181 bits (459), Expect = 9.050e-50 Identity = 93/202 (46.04%), Postives = 142/202 (70.30%), Query Frame = 1
Query: 304 MGKRGLSVEEKRDKVLDIYHSTKAIYSLKEIEKAASKQGVTVNTVKEVNQSLVDDGLVDMDKIGASNFFWSFPSKVAVTKQNVVDNLEQSIAKAEDNTATNKRKISELEEGRADTASRREKLGRLQENGLRLQELDMEYESLKENDPAELEKVTRLTQVCKDGVNRWTDNSWCIKSXMVKTKGMSGKDVDKYLQIKGDFDQV 909
M ++G+S++EKR+++L IYH +K +++LKE+EK SK GV + TVK+VNQ+LVDD LVD DKIG+ N+FWSFPSK++ T++ + LEQ A+D K+ + + + R ++ R +KL RL+E ++Q L + + L ENDP LE++ R ++ K+G +RWTDN + +KS +VK +G+ GK+VDK+L IK DFD V
Sbjct: 1 MPRKGVSLQEKRERILRIYHESKEVFNLKEVEKLGSKAGVVLQTVKDVNQALVDDVLVDCDKIGSGNYFWSFPSKLSQTRRRKLSELEQRHQTAQDKLVKVKQNVEKQKGLRPESEERVQKLRRLEEQKAKVQVLRTKVQHLAENDPEILEQLERKVRMAKEGSDRWTDNVYTLKSWVVKKRGVEGKEVDKWLGIKDDFDYV 202
BLAST of mRNA_E_fasciculatus_S2_contig945.17482.1 vs.
Match: Protein (involved in meiotic recombination/predicted coiled-coil protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AFA8_PLAHL) HSP 1 Score: 177 bits (448), Expect = 3.450e-48 Identity = 91/202 (45.05%), Postives = 141/202 (69.80%), Query Frame = 1
Query: 304 MGKRGLSVEEKRDKVLDIYHSTKAIYSLKEIEKAASKQGVTVNTVKEVNQSLVDDGLVDMDKIGASNFFWSFPSKVAVTKQNVVDNLEQSIAKAEDNTATNKRKISELEEGRADTASRREKLGRLQENGLRLQELDMEYESLKENDPAELEKVTRLTQVCKDGVNRWTDNSWCIKSXMVKTKGMSGKDVDKYLQIKGDFDQV 909
M ++G+S++EKR+++L IYH +K +++LKE+EK SK GV + TVK+VNQ+LVDD LVD DKIG+ N+FWSFPSK++ +++ + LEQ ++ K KI E + R+D+ R +KL RL+E ++++ L + L ENDPA LE + + K+G +RWTDN + +KS +VK +G+ GK+V+K+L+I+ DFD V
Sbjct: 1 MPRKGVSLQEKRERILRIYHESKEVFNLKEVEKLGSKAGVVLQTVKDVNQALVDDALVDCDKIGSGNYFWSFPSKLSQSRKRKLSELEQCRQARQEKLDRVKEKIEEQQALRSDSDERIQKLKRLEELKVKVESLRNTMQHLAENDPAILEDLECKVGIAKEGADRWTDNVFTLKSWVVKKRGVEGKEVNKWLEIQDDFDYV 202
BLAST of mRNA_E_fasciculatus_S2_contig945.17482.1 vs.
Match: Meiotic (nuclear division protein 1 n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TRE1_9STRA) HSP 1 Score: 177 bits (448), Expect = 3.560e-48 Identity = 95/201 (47.26%), Postives = 135/201 (67.16%), Query Frame = 1
Query: 310 KRGLSVEEKRDKVLDIYHSTKAIYSLKEIEKAASKQGVTVNTVKEVNQSLVDDGLVDMDKIGASNFFWSFPSKVAVTKQNVVDNLEQSIAKAEDNTATNKRKISELEEGRADTASRREKLGRLQENGLRLQELDME-YESLKENDPAELEKVTRLTQVCKDGVNRWTDNSWCIKSXMVKTKGMSGKDVDKYLQIKGDFDQV 909
++G+S+EEKR +L IYHST A+YSLKE+E ASKQGV +VK+VNQ LVDDGLV+M+K+GASN F++FP K +K+ NLE +A+ + + +T + K + L GR D+ RR+ + E L L+ +E + K+NDP ++E++ +CK GVNRWTDN + IKS +VK +GM KDVDK+L + FD V
Sbjct: 4 RKGMSLEEKRQTILKIYHSTGAVYSLKEMEGLASKQGVVSQSVKDVNQGLVDDGLVEMEKVGASNVFFAFPGKAIASKRTATVNLESEVARLKAHVSTLEEKAAALSAGRQDSEKRRQNMEDY-ETALALKTKQLEEVQRFKDNDPVKIERLEAQAALCKQGVNRWTDNIFSIKSYLVKKRGMYSKDVDKFLGLTDSFDYV 203
BLAST of mRNA_E_fasciculatus_S2_contig945.17482.1 vs.
Match: Hypothetical (protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XLC7_HETAK) HSP 1 Score: 175 bits (444), Expect = 5.750e-48 Identity = 94/200 (47.00%), Postives = 122/200 (61.00%), Query Frame = 1
Query: 310 KRGLSVEEKRDKVLDIYHSTKAIYSLKEIEKAASKQGVTVNTVKEVNQSLVDDGLVDMDKIGASNFFWSFPSKVAVTKQNVVDNLEQSIAKAEDNTATNKRKISELEEGRADTASRREKLGRLQENGLRLQELDMEYESLKENDPAELEKVTRLTQVCKDGVNRWTDNSWCIKSXMVKTKGMSGKDVDKYLQIKGDFDQV 909
++G+S EEKR ++L IYH K + +LKE+EK KQGV V ++KEVNQ+LVDD LVD DKIG++NFFWSFPSKVA L GR DT RR +L +LQ+ R LD ++LKENDP EL ++ T+ CK+ NRWTDN W +KS +K KGM+ +VD+YLQ+ DFD V
Sbjct: 5 RKGVSYEEKRTRILGIYHEKKEVLNLKELEKLGVKQGVVVQSIKEVNQALVDDNLVDTDKIGSANFFWSFPSKVAEL----------------------------LGAGRHDTPQRRAQLQKLQDEKAREAALDQRLDTLKENDPRELARIETETEKCKEAANRWTDNIWALKSWCIKKKGMASTEVDRYLQLSSDFDYV 176
BLAST of mRNA_E_fasciculatus_S2_contig945.17482.1 vs.
Match: Uncharacterized (protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D7I4_9STRA) HSP 1 Score: 178 bits (451), Expect = 1.660e-47 Identity = 99/205 (48.29%), Postives = 137/205 (66.83%), Query Frame = 1
Query: 301 TMGKR-GLSVEEKRDKVLDIYHSTKAIYSLKEIEKAASKQGVTVNTVKEVNQSLVDDGLVDMDKIGASNFFWSFPSKVAVTKQNVVDNLEQSIAKAEDNTATNKRKISELEEGRADTASRREKLGRLQENGLRLQELDME-YESLKENDPAELEKVTRLTQVCKDGVNRWTDNSWCIKSXMVKTKGMSGKDVDKYLQIKGDFDQV 909
TM KR G+S+EEKR +L IYHST A+YSLKE+E ASKQGV +VK+VNQ LVDDGLV+M+K+GASN F++FP K +K+ NLE +A+ + + +T + K + L GR D+ RR+ + E L L+ +E + K+NDP ++E++ +CK GVNRWTDN + IKS +VK +GM KDVDK+L + FD V
Sbjct: 86 TMPKRKGMSLEEKRQTILKIYHSTGAVYSLKEMEGLASKQGVVSQSVKDVNQGLVDDGLVEMEKVGASNVFFAFPGKAIASKRTATVNLESEVARLKAHVSTLEEKAAALSTGRQDSEKRRQNMEDY-ETALALKTKQLEEVQRFKDNDPVKIERLEAQAALCKQGVNRWTDNIFSIKSYLVKKRGMYSKDVDKFLGLTDSFDYV 289
BLAST of mRNA_E_fasciculatus_S2_contig945.17482.1 vs.
Match: Uncharacterized (protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y0R0_9STRA) HSP 1 Score: 169 bits (428), Expect = 2.590e-45 Identity = 90/203 (44.33%), Postives = 136/203 (67.00%), Query Frame = 1
Query: 304 MGKR-GLSVEEKRDKVLDIYHSTKAIYSLKEIEKAASKQGVTVNTVKEVNQSLVDDGLVDMDKIGASNFFWSFPSKVAVTKQNVVDNLEQSIAKAEDNTATNKRKISELEEGRADTASRREKLGRLQENGLRLQELDMEYESLKENDPAELEKVTRLTQVCKDGVNRWTDNSWCIKSXMVKTKGMSGKDVDKYLQIKGDFDQV 909
M KR G+S+EEKR ++L IYH +K +++LKE+EK +K GV + T+K+VNQ+LVDDGLVD DKIG+ N+FWSFPSK++ ++ + LEQ A A+D A ++ I E + R ++ R KL RL E +++L + + L +NDP L ++ R QV K G +RWTDN + ++S + + +G + +VDK+L IK DFD +
Sbjct: 1 MSKRKGVSLEEKRARILHIYHDSKDVFNLKEVEKIGAKAGVVLQTIKDVNQALVDDGLVDCDKIGSGNYFWSFPSKLSQARKRKLGELEQRKAAAQDKLAKVRQSIDEQKSKRTESDDRAAKLQRLAELQASVKDLKAKVQHLADNDPEILAQLERSVQVAKIGADRWTDNVFTMRSWVAQKRGCASSEVDKWLGIKDDFDYI 203
BLAST of mRNA_E_fasciculatus_S2_contig945.17482.1 vs.
Match: Uncharacterized (protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FKH2_PYTOL) HSP 1 Score: 168 bits (426), Expect = 5.160e-45 Identity = 87/200 (43.50%), Postives = 134/200 (67.00%), Query Frame = 1
Query: 310 KRGLSVEEKRDKVLDIYHSTKAIYSLKEIEKAASKQGVTVNTVKEVNQSLVDDGLVDMDKIGASNFFWSFPSKVAVTKQNVVDNLEQSIAKAEDNTATNKRKISELEEGRADTASRREKLGRLQENGLRLQELDMEYESLKENDPAELEKVTRLTQVCKDGVNRWTDNSWCIKSXMVKTKGMSGKDVDKYLQIKGDFDQV 909
K+G+S+EEKR+++L IYH +K +Y++KEIEK +K GV + T+K+VNQ+LVDD LVD DKIG+ N+FWSFPSKV+ ++ + LEQ + + K+++ + + R D+ R KL RL E ++++ + + L +NDPA LE + R QV K G +RWTDN + ++S + + +G S +VDK+L IK DFD +
Sbjct: 5 KKGVSLEEKRERILKIYHESKDVYNIKEIEKLGAKAGVVLQTIKDVNQALVDDALVDFDKIGSGNYFWSFPSKVSQQRKRKLSELEQRKQSTSEQLSKVKQEVEKQKSLRTDSDDRVAKLQRLAELQTHVKDMKAKIQHLADNDPAILEHLERNMQVAKVGADRWTDNVYTVRSWVAQKRGCSTGEVDKWLGIKDDFDYI 204 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig945.17482.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig945.17482.1 >prot_E_fasciculatus_S2_contig945.17482.1 ID=prot_E_fasciculatus_S2_contig945.17482.1|Name=mRNA_E_fasciculatus_S2_contig945.17482.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=203bp MGKRGLSVEEKRDKVLDIYHSTKAIYSLKEIEKAASKQGVTVNTVKEVNQback to top mRNA from alignment at E_fasciculatus_S2_contig945:480..5089- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig945.17482.1 ID=mRNA_E_fasciculatus_S2_contig945.17482.1|Name=mRNA_E_fasciculatus_S2_contig945.17482.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=4610bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig945:480..5089- (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig945:480..5089- >mRNA_E_fasciculatus_S2_contig945.17482.1 ID=mRNA_E_fasciculatus_S2_contig945.17482.1|Name=mRNA_E_fasciculatus_S2_contig945.17482.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=609bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig945:480..5089- (Ectocarpus fasciculatus EfasUO2)back to top |