mRNA_E_fasciculatus_S2_contig9412.17460.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig9412.17460.1 vs.
Match: FA_desaturase (domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KG61_9PHAE) HSP 1 Score: 241 bits (615), Expect = 1.000e-75 Identity = 111/112 (99.11%), Postives = 112/112 (100.00%), Query Frame = 3
Query: 78 VNYVEHYGLERKRDDQGKTEPVGFEHSWDAPHRLTNMVLFKLQRHGDHHVNSTRRYQTLRAEPSRSPQLPLGYPGCILLALFPPLWRAVMDKRVLKLRSKNHPGRAWRHGPP 413
VNYVEHYGLERKRD+QGKTEPVGFEHSWDAPHRLTNMVLFKLQRHGDHHVNSTRRYQTLRAEPSRSPQLPLGYPGCILLALFPPLWRAVMDKRVLKLRSKNHPGRAWRHGPP
Sbjct: 335 VNYVEHYGLERKRDEQGKTEPVGFEHSWDAPHRLTNMVLFKLQRHGDHHVNSTRRYQTLRAEPSRSPQLPLGYPGCILLALFPPLWRAVMDKRVLKLRSKNHPGRAWRHGPP 446
BLAST of mRNA_E_fasciculatus_S2_contig9412.17460.1 vs.
Match: Fatty (acid desaturase-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CE88_9STRA) HSP 1 Score: 143 bits (361), Expect = 6.140e-37 Identity = 69/111 (62.16%), Postives = 81/111 (72.97%), Query Frame = 3
Query: 78 VNYVEHYGLERKRDDQGKTEPVGFEHSWDAPHRLTNMVLFKLQRHGDHHVNSTRRYQTLRAEPSRSPQLPLGYPGCILLALFPPLWRAVMDKRVLKLRSKNHPGRAWRHGP 410
VNY+EHYGLER+ GK E VG EHSWD+P RL+NM LFKLQRH DHH+ + +RYQ L A+ +PQLP GYPG ILLA PP W VMD R+ LR++ HPGR WR GP
Sbjct: 556 VNYLEHYGLERREVSPGKYESVGVEHSWDSPFRLSNMCLFKLQRHADHHIAAGKRYQLLLAQKD-APQLPCGYPGSILLAFVPPAWFRVMDPRIHALRAR-HPGRVWRFGP 664
BLAST of mRNA_E_fasciculatus_S2_contig9412.17460.1 vs.
Match: Alkane (monooxygenase n=1 Tax=Legionella steigerwaltii TaxID=460 RepID=A0A378L8H5_9GAMM) HSP 1 Score: 132 bits (332), Expect = 1.730e-34 Identity = 65/101 (64.36%), Postives = 76/101 (75.25%), Query Frame = 3
Query: 78 VNYVEHYGLERKRDDQGKTEPVGFEHSWDAPHRLTNMVLFKLQRHGDHHVNSTRRYQTLRAEPSRSPQLPLGYPGCILLALFPPLWRAVMDKRVLKLRSKN 380
+NY+EHYGLERK+ G E V +HSW+A H L+NM+LF+LQRH DHHV+ R YQ LR S SPQLP GY G ++LALFPPLWR VMDKRVL RSKN
Sbjct: 250 INYIEHYGLERKKLANGSYEKVSAQHSWNASHWLSNMILFQLQRHSDHHVHGARPYQLLRHIDS-SPQLPSGYLGMLILALFPPLWRKVMDKRVLIYRSKN 349
BLAST of mRNA_E_fasciculatus_S2_contig9412.17460.1 vs.
Match: Alkane (1-monooxygenase 2 n=3 Tax=Legionellaceae TaxID=444 RepID=A0A377GK50_9GAMM) HSP 1 Score: 131 bits (329), Expect = 4.710e-34 Identity = 65/101 (64.36%), Postives = 74/101 (73.27%), Query Frame = 3
Query: 78 VNYVEHYGLERKRDDQGKTEPVGFEHSWDAPHRLTNMVLFKLQRHGDHHVNSTRRYQTLRAEPSRSPQLPLGYPGCILLALFPPLWRAVMDKRVLKLRSKN 380
+NY+EHYGLERK+ G E V +HSW+A H L+NM+LF LQRH DHHV+ R YQ LR SPQLP GY G I+LALFPPLWR VMDKRVL RSKN
Sbjct: 250 INYIEHYGLERKKLANGAYEKVSIQHSWNASHWLSNMLLFHLQRHSDHHVHGARPYQLLR-HIDTSPQLPSGYLGMIILALFPPLWRRVMDKRVLAHRSKN 349
BLAST of mRNA_E_fasciculatus_S2_contig9412.17460.1 vs.
Match: Alkane (monooxygenase n=1 Tax=Legionella cherrii TaxID=28084 RepID=A0A0W0S8S6_9GAMM) HSP 1 Score: 130 bits (328), Expect = 6.750e-34 Identity = 65/101 (64.36%), Postives = 75/101 (74.26%), Query Frame = 3
Query: 78 VNYVEHYGLERKRDDQGKTEPVGFEHSWDAPHRLTNMVLFKLQRHGDHHVNSTRRYQTLRAEPSRSPQLPLGYPGCILLALFPPLWRAVMDKRVLKLRSKN 380
+NY+EHYGLERK+ G E V +HSW+A H L+NM+LF LQRH DHHV+ R YQ LR S SPQLP GY G ++LALFPPLWR VMDKRVL RSKN
Sbjct: 250 INYIEHYGLERKKLANGSYEKVSAQHSWNASHWLSNMLLFHLQRHSDHHVHGARPYQLLRHIDS-SPQLPSGYLGMLILALFPPLWRGVMDKRVLISRSKN 349
BLAST of mRNA_E_fasciculatus_S2_contig9412.17460.1 vs.
Match: Alkane (1-monooxygenase n=1 Tax=Legionella sp. PC997 TaxID=2755562 RepID=A0A7G4RHJ9_9GAMM) HSP 1 Score: 129 bits (324), Expect = 2.720e-33 Identity = 64/101 (63.37%), Postives = 73/101 (72.28%), Query Frame = 3
Query: 78 VNYVEHYGLERKRDDQGKTEPVGFEHSWDAPHRLTNMVLFKLQRHGDHHVNSTRRYQTLRAEPSRSPQLPLGYPGCILLALFPPLWRAVMDKRVLKLRSKN 380
+NYVEHYGLERK+ G E V +HSW+A H L+NM+LF LQRH DHHV+ R YQ LR SPQLP GY G I+LALFPPLWR VMDKRVL R+ N
Sbjct: 250 INYVEHYGLERKKFADGSYEKVSIQHSWNASHWLSNMLLFHLQRHSDHHVHGARPYQLLR-HLDASPQLPSGYLGMIILALFPPLWRKVMDKRVLAHRASN 349
BLAST of mRNA_E_fasciculatus_S2_contig9412.17460.1 vs.
Match: Hypothetical (protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H4D6_9STRA) HSP 1 Score: 121 bits (303), Expect = 2.890e-32 Identity = 62/111 (55.86%), Postives = 77/111 (69.37%), Query Frame = 3
Query: 78 VNYVEHYGLERKRDDQGKTEPVGFEHSWDAPHRLTNMVLFKLQRHGDHHVNSTRRYQTLRAEPSRSPQLPLGYPGCILLALFPPLWRAVMDKRVLKLRSKNHPGRAWRHGP 410
VNY+EHYGLER+ G+ E V +HSWD R+TN V+FKL+RH DHH ++ +RYQTL+A S SPQLP GY ILLA FPPLW VM R+L R + G+ +RHGP
Sbjct: 4 VNYLEHYGLERRELKPGQYEQVQPQHSWDTACRVTNHVMFKLERHADHHAHAGKRYQTLQAYDS-SPQLPAGYATMILLAFFPPLWHMVMHPRLLAHR-RQQVGQVFRHGP 112
BLAST of mRNA_E_fasciculatus_S2_contig9412.17460.1 vs.
Match: Alkane-1-monooxygenase (n=2 Tax=Legionella TaxID=445 RepID=A0A378JNT5_9GAMM) HSP 1 Score: 126 bits (317), Expect = 3.140e-32 Identity = 60/102 (58.82%), Postives = 75/102 (73.53%), Query Frame = 3
Query: 78 VNYVEHYGLERKRDDQGKTEPVGFEHSWDAPHRLTNMVLFKLQRHGDHHVNSTRRYQTLRAEPSRSPQLPLGYPGCILLALFPPLWRAVMDKRVLKLRSKNH 383
VNY+EHYGLER++ G+ E V F+HSW+A H L+N++LF+LQRH DHH+N + YQ L+ SPQLP GY G I LAL PPLW VMDKRVL RSK++
Sbjct: 250 VNYIEHYGLERQKLANGQYEKVSFQHSWNANHWLSNVILFQLQRHADHHLNGAKPYQVLK-HIDESPQLPTGYLGMIFLALIPPLWHKVMDKRVLDYRSKHN 350
BLAST of mRNA_E_fasciculatus_S2_contig9412.17460.1 vs.
Match: Alkane (monooxygenase n=6 Tax=Legionella TaxID=445 RepID=A0A0W0ZV20_9GAMM) HSP 1 Score: 125 bits (314), Expect = 7.760e-32 Identity = 62/101 (61.39%), Postives = 74/101 (73.27%), Query Frame = 3
Query: 78 VNYVEHYGLERKRDDQGKTEPVGFEHSWDAPHRLTNMVLFKLQRHGDHHVNSTRRYQTLRAEPSRSPQLPLGYPGCILLALFPPLWRAVMDKRVLKLRSKN 380
+NY+EHYGLERK+ G E V +HSW+A H L+NM+LF+LQRH DHHV+ R YQ LR S SPQLP GY G I+LAL PPLWR +MDKRVL R+ N
Sbjct: 250 INYIEHYGLERKKLTNGSYEKVSEQHSWNASHWLSNMLLFQLQRHSDHHVHGARPYQLLRHIDS-SPQLPSGYLGMIILALCPPLWRRIMDKRVLAKRALN 349
BLAST of mRNA_E_fasciculatus_S2_contig9412.17460.1 vs.
Match: Alkane (1-monooxygenase n=1 Tax=Oleiagrimonas soli TaxID=1543381 RepID=A0A099CVF7_9GAMM) HSP 1 Score: 125 bits (314), Expect = 9.630e-32 Identity = 61/111 (54.95%), Postives = 77/111 (69.37%), Query Frame = 3
Query: 57 STSTVTKVNYVEHYGLERKRDDQGKTEPVGFEHSWDAPHRLTNMVLFKLQRHGDHHVNSTRRYQTLRAEPSRSPQLPLGYPGCILLALFPPLWRAVMDKRVLKLRSKNHPG 389
+ +T+ +NYVEHYGL R RD QG+ E V HSW+A RLTN +LF+LQRH DHH ++ RRYQ LR + SPQLP GY G +LAL PPLWR +MD+RV ++N G
Sbjct: 250 AAATLEVINYVEHYGLRRARDAQGRYERVTHLHSWNASQRLTNWLLFQLQRHSDHHAHARRRYQVLRHH-ADSPQLPTGYAGMFVLALVPPLWRRLMDERVRHFNARNDLG 359 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig9412.17460.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig9412.17460.1 >prot_E_fasciculatus_S2_contig9412.17460.1 ID=prot_E_fasciculatus_S2_contig9412.17460.1|Name=mRNA_E_fasciculatus_S2_contig9412.17460.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=139bp MAHAMTWDRACSRACRPPSTSTVTKVNYVEHYGLERKRDDQGKTEPVGFEback to top mRNA from alignment at E_fasciculatus_S2_contig9412:748..2399+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig9412.17460.1 ID=mRNA_E_fasciculatus_S2_contig9412.17460.1|Name=mRNA_E_fasciculatus_S2_contig9412.17460.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=1652bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig9412:748..2399+ (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig9412:748..2399+ >mRNA_E_fasciculatus_S2_contig9412.17460.1 ID=mRNA_E_fasciculatus_S2_contig9412.17460.1|Name=mRNA_E_fasciculatus_S2_contig9412.17460.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=417bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig9412:748..2399+ (Ectocarpus fasciculatus EfasUO2)back to top |