prot_E_fasciculatus_S2_contig931.17369.1 (polypeptide) Ectocarpus fasciculatus EfasUO2

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E_fasciculatus_S2_contig931.17369.1
Unique Nameprot_E_fasciculatus_S2_contig931.17369.1
Typepolypeptide
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Sequence length311
Homology
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BLAST of mRNA_E_fasciculatus_S2_contig931.17369.1 vs. uniprot
Match: D7G477_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G477_ECTSI)

HSP 1 Score: 484 bits (1246), Expect = 7.760e-168
Identity = 277/303 (91.42%), Postives = 286/303 (94.39%), Query Frame = 0 
Query:    8 RKEAGESQDHEGQYRIRRPNLRQLDDKDVDAVFAEGPGAINSLRDVQSWRVLVMGLQRLSGKDMARHVPTNVRPHRRHTLPLAAKGDLARKQDYLPGRGRRTSLLGTAYEPAALFLKQRAERKSVREADLEKDTARAAEKWNLKPLLEKPERCAIGETDGEQTSSSRGNLSVAGLPLLDEDVDIIVHLLRQNHAFTRLDLSRCFLSEKQFVSLAQALAWNSRIEELFLQXXXXXXXXXXXXXXXXXXXXHIHCLDVRGCKGLDEKSIRVLLGGARSKGNLLTFNGMKLANLRAEGTDELDLSG 310
            RKEA ES+DH GQ RIRRPNLRQLDDKDVDAVFAEGPGAINSLRDVQSWRVLVMGLQRLSGKDMARHVPTNVRP RRHTLPLAAKGDLARKQDYLPGRGRRTSLLGTAYEPAALFLKQRAER+S+READLEKDTA+AAEKWNLKPL EK ERC   E+DGEQTSS RGNLSVAGLPLLDEDVDIIVHLLRQNHAF RLDLSRCFLSEKQFVSLAQALAWNSRIEELF  XXXXXXXXXXXXXXXXXXXX  H LDVRGCKGLDEKSI+V+LGGARSKGNLLTFNGM LA+LRAEG+DELDLSG
Sbjct:  197 RKEAEESRDHGGQSRIRRPNLRQLDDKDVDAVFAEGPGAINSLRDVQSWRVLVMGLQRLSGKDMARHVPTNVRPRRRHTLPLAAKGDLARKQDYLPGRGRRTSLLGTAYEPAALFLKQRAERRSIREADLEKDTAKAAEKWNLKPLREKSERC---ESDGEQTSS-RGNLSVAGLPLLDEDVDIIVHLLRQNHAFKRLDLSRCFLSEKQFVSLAQALAWNSRIEELFXXXXXXXXXXXXXXXXXXXXXXXXHSLDVRGCKGLDEKSIKVILGGARSKGNLLTFNGMNLADLRAEGSDELDLSG 495
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig931.17369.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G477_ECTSI7.760e-16891.42Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 170..301
e-value: 2.0E-14
score: 55.4
NoneNo IPR availableSUPERFAMILY52047RNI-likecoord: 177..288

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig931contigE_fasciculatus_S2_contig931:6196..8762 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO22022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig931.17369.1mRNA_E_fasciculatus_S2_contig931.17369.1Ectocarpus fasciculatus EfasUO2mRNAE_fasciculatus_S2_contig931 6196..8762 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E_fasciculatus_S2_contig931.17369.1 ID=prot_E_fasciculatus_S2_contig931.17369.1|Name=mRNA_E_fasciculatus_S2_contig931.17369.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=311bp
MEAFTIGRKEAGESQDHEGQYRIRRPNLRQLDDKDVDAVFAEGPGAINSL
RDVQSWRVLVMGLQRLSGKDMARHVPTNVRPHRRHTLPLAAKGDLARKQD
YLPGRGRRTSLLGTAYEPAALFLKQRAERKSVREADLEKDTARAAEKWNL
KPLLEKPERCAIGETDGEQTSSSRGNLSVAGLPLLDEDVDIIVHLLRQNH
AFTRLDLSRCFLSEKQFVSLAQALAWNSRIEELFLQECVFTGVRTAALAD
VLTLNSHIHCLDVRGCKGLDEKSIRVLLGGARSKGNLLTFNGMKLANLRA
EGTDELDLSG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032675LRR_dom_sf