mRNA_E_fasciculatus_S2_contig9032.17125.1 (mRNA) Ectocarpus fasciculatus EfasUO2

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E_fasciculatus_S2_contig9032.17125.1
Unique NamemRNA_E_fasciculatus_S2_contig9032.17125.1
TypemRNA
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Homology
BLAST of mRNA_E_fasciculatus_S2_contig9032.17125.1 vs.
Match: Uncharacterized (protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FP69_ECTSI)

HSP 1 Score: 590 bits (1520), Expect = 3.190e-198
Identity = 329/366 (89.89%), Postives = 333/366 (90.98%), Query Frame = 3
Query:    3 KGDPEKEDKDLLKHRVWFWQDKLPHTDQYVLRWESDWLVTLGKSVETIVKSLSQSAMQETLKYTTLAAIMTSLAWPLALISLSSMIDADWTIGRERADVAGKILADALLNREQGCRPVTLVGTSLGARLIFACLEEIARRHELWEEQMXXXXXXXXXXXXXXXXXXXXX-AGRGPSRSKMTRLKNAVTPDNRGKSKAGLNGVGVSGGSXXXXXXXXXX-----KNEARCAAGVIENVCLLGAPVGATAARWERVARMAHGRVINGYSKSDVIIGLVFRAKSLSLSVSGIQKVSAVGVENVDLSSVVGSNHFNYNRKMPEILELLDLDNCSKYIGPGDSAEDCSPAPPAGQRLGSDDVVVYGTTVVP 1082
            KGDPEKEDKDLLKHRVWFWQDKLPHTDQYVLRWESDWLVTLGKSVETI+KSLSQSAMQETLKYTTLAAIMTSLAWPLALISLSSMIDADWTIGRERADVAGKILADALLNREQGCRPVTLVGTSLGARLIFACLEEIARRHELWEEQM  XXXXX               AGRGP RSKMTRL+NAVTPDNRGKSKAGLNGVGVS GS XXXXXXXXX     KNEARCAAGVIENVCLLGAPVGATAARWERVARMAHGRVINGYSKSDVIIGLVFRAKSLSLSVSGIQKVSAVGVENVDLSSVVGSNHFNYNRKMPEILELLDLDN S YIG GDS E+ SPA  AGQR GSD+VVVYGTTVVP
Sbjct:  600 KGDPEKEDKDLLKHRVWFWQDKLPHTDQYVLRWESDWLVTLGKSVETIIKSLSQSAMQETLKYTTLAAIMTSLAWPLALISLSSMIDADWTIGRERADVAGKILADALLNREQGCRPVTLVGTSLGARLIFACLEEIARRHELWEEQMMEXXXXXQDHWGCAAAGSSATTAGRGPPRSKMTRLRNAVTPDNRGKSKAGLNGVGVSAGSSXXXXXXXXXXXXXXKNEARCAAGVIENVCLLGAPVGATAARWERVARMAHGRVINGYSKSDVIIGLVFRAKSLSLSVSGIQKVSAVGVENVDLSSVVGSNHFNYNRKMPEILELLDLDNTSTYIGRGDSPEEISPAVAAGQRYGSDNVVVYGTTVVP 965          
BLAST of mRNA_E_fasciculatus_S2_contig9032.17125.1 vs.
Match: Uncharacterized (protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4D9_9STRA)

HSP 1 Score: 233 bits (595), Expect = 3.490e-68
Identity = 130/305 (42.62%), Postives = 181/305 (59.34%), Query Frame = 3
Query:   69 LPHTDQYVLRWESDWLVTLGKSVETIVKSLSQSAMQETLKYTTLAAIMTSLAWPLALISLSSMIDADWTIGRERADVAGKILADALLNREQGCRPVTLVGTSLGARLIFACLEEIARRHELWEEQMXXXXXXXXXXXXXXXXXXXXXAGRGPSRSKMTRLKNAVTPDNRGKSKAGLNGVGVSGGSXXXXXXXXXXKNEARC-AAGVIENVCLLGAPVGATAARWERVARMAHGRVINGYSKSDVIIGLVFRAKSLSLSVSGIQKVSAVGVENVDLSSVVGSNHFNYNRKMPEILELLDLDNCSKY 980
            +PH++Q++L WES  LV LG SV   ++    +A+Q+ L++T L  +  +++ P+ L++L+  ID+DW IG ERAD AGK+LA  LL+REQG RPVTL+GTS+GARL+F+CLEE+ RRHELWE                                     K   +P  RG+   G+ G                      C AAG+IEN  LLGAPVG +  RWERVAR+ HGR+INGY K D I+GL++R + LS+SV+G+Q +++  VEN DLS  + S H  Y  ++PEI+ LL LD+C +Y
Sbjct:    1 MPHSEQHLLVWESKLLVELGDSVVKALQDAGLTALQQGLQFTALGVLAAAVSLPITLVALADYIDSDWAIGCERADKAGKVLAGILLSREQGTRPVTLIGTSIGARLMFSCLEEMVRRHELWEASG----------------------------------KQRASPPRRGRKGGGMGGP---------------------CNAAGIIENAVLLGAPVGVSPKRWERVARVVHGRLINGYFKKDGILGLIYRIRRLSVSVAGLQPIASRAVENADLSPAL-SQHMQYCSRVPEIMALLQLDDCRRY 249          
BLAST of mRNA_E_fasciculatus_S2_contig9032.17125.1 vs.
Match: Hypothetical (protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RYC4_9STRA)

HSP 1 Score: 167 bits (424), Expect = 4.880e-42
Identity = 110/335 (32.84%), Postives = 169/335 (50.45%), Query Frame = 3
Query:   45 RVWFWQDKLPHTDQYVLRWESDWLVTLGKSVETIVKSLSQSAMQETLKYTTLAAIMTSLAWPLALISLSSMIDADWTIGRERADVAGKILADALLNREQGCRPVTLVGTSLGARLIFACLEEIARRHELWEEQMXXXXXXXXXXXXXXXXXXXXXAGRGPSRSKMTRLKNAVTP--DNRGKSKAGLNGVGVSGGSXXXXXXXXXXKNEARCAAGVIENVCLLGAPVGATAARWERVARMAHGRVINGYSKSDVIIGLVFRAKSLSLSVSGIQKVSAVGV-------------------------ENVDLSSVVGSNHFNYNRKMPEILELLDLDN 968
            +VWFW  +   T+QY LRWES  L TLG SV  +++S S +A +E   YT  AA++ ++AWP  +I     ID  WT+  ERAD+AG++LA+ LL R  G RPVTL+G S+GARLIF+CL  + ++HE W  ++                                    A+ P   NRG  +                      KN     AG++E+V L+G PV    ++W  VA++  GR++N YS +D  +G+++R +  S +V+GI+ V+   V                         E++D+SSV+   H +Y +K+P+IL+L+ LD+
Sbjct:  185 QVWFWSQRFHGTEQYYLRWESATLTTLGSSVMELIQSASTAAAREVATYTVFAAVVAAVAWPYYIIKAFDSIDPIWTLACERADLAGQLLAETLLERAHGSRPVTLIGYSMGARLIFSCLRTLRQKHETWLAEVQEETA-------------------------------ALEPHGSNRGADERSA-----------------MFKNSP--VAGLVEDVVLMGTPV-PCGSQWTEVAKIVGGRLVNCYSATDWTLGILYRYQRWSTTVAGIRPVNPNAVDAEKLQGVDVDVDLTVNDEGAYWNLEDLDVSSVI-KYHSDYPKKIPQILDLVALDD 467          
BLAST of mRNA_E_fasciculatus_S2_contig9032.17125.1 vs.
Match: Uncharacterized (protein n=5 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TZH7_9STRA)

HSP 1 Score: 169 bits (428), Expect = 7.240e-41
Identity = 106/314 (33.76%), Postives = 162/314 (51.59%), Query Frame = 3
Query:   27 KDLLKHRVWFWQDKLPHTDQYVLRWESDWLVTLGKSVETIVKSLSQSAMQETLKYTTLAAIMTSLAWPLALISLSSMIDADWTIGRERADVAGKILADALLNREQGCRPVTLVGTSLGARLIFACLEEIARRHELWEEQMXXXXXXXXXXXXXXXXXXXXXAGRGPSRSKMTRLKNAVTPDNRGKSKAGLNGVGVSGGSXXXXXXXXXXKNEARCAAGVIENVCLLGAPVGATAARWERVARMAHGRVINGYSKSDVIIGLVFRAKSLSLSVSGIQKVSAVGVENVDLSSVVGSNHFNYNRKMPEILELLDLDN 968
            +DL +    +W D  P+ + + L WES  L  +G SV  IV S  Q A  E L +T  A+++++LAWP+ L+  + MID  WTI  E+AD AG++LA  L+ +E+G RP+ L+G S+GARLI ACL E+AR H  WE+                            S S +     A TP  R K++ G                           +G+I+ V L+GAPV  + + W +  ++  GR++N YSK D ++ L++R   L  + +GI  V   G+ENVD+S +V   H +Y  K+ +IL L+ L++
Sbjct:  585 RDLSQDFSPWWLDMFPYLETFTLHWESKALSKMGSSVMDIVASFGQQAALEVLTFTAAASLVSALAWPITLLQAADMIDNSWTIACEKADRAGQLLAQILVRKERGHRPIVLIGFSMGARLIMACLSELARIHNSWEDGQNDKGQKPEVQIKA-------------STSAVQLSPTASTPS-REKTETGSP------------------------VSGLIDTVVLMGAPVSCSESSWVKARKVVAGRLVNCYSKKDWVLSLMYRYHKLVTNAAGIAPVHVCGIENVDVSELV-PGHQHYATKIKDILLLVGLED 859          
BLAST of mRNA_E_fasciculatus_S2_contig9032.17125.1 vs.
Match: Uncharacterized (protein n=2 Tax=Phytophthora TaxID=4783 RepID=D0NN16_PHYIT)

HSP 1 Score: 164 bits (414), Expect = 1.720e-40
Identity = 102/308 (33.12%), Postives = 146/308 (47.40%), Query Frame = 3
Query:   45 RVWFWQDKLPHTDQYVLRWESDWLVTLGKSVETIV-KSLSQSAMQETLKYTTLAAIMTSLAWPLALISLSSMIDADWTIGRERADVAGKILADALLNREQGCRPVTLVGTSLGARLIFACLEEIARRHELWEEQMXXXXXXXXXXXXXXXXXXXXXAGRGPSRSKMTRLKNAVTPDNRGKSKAGLNGVGVSGGSXXXXXXXXXXKNEARCAAGVIENVCLLGAPVGATAARWERVARMAHGRVINGYSKSDVIIGLVFRAKSLSLSVSGIQKVSAVGVENVDLSSVVGSNHFNYNRKMPEILELLDLD 965
            R W W+D+ P  DQY L WE   L   GKS+ T   + +S  A  E +KYT LAA+  ++A P  ++ L+ +ID  WT+    AD +GK+LADAL  REQG RPVTLVG  +GARLIF+CL+E+A+   + E                                                                                G++EN  LLG+PV      W    R+  GR+INGYS+ D ++G+++R +  +L+ +GI  +   GVENVDLS ++G  H  Y  K+  I++LL L+
Sbjct:  270 RAWRWKDRFPQGDQYCLIWEEAGLRRFGKSMRTFAAEQVSNYATTEIVKYTALAALFAAVAIPRVILRLADIIDNAWTVTMNAADTSGKLLADALRKREQGLRPVTLVGYGMGARLIFSCLKELAKSETIDES------------------------------------------------------------------------------CGIVENAVLLGSPVPMARDDWANARRVVSGRLINGYSEKDWMLGVMYRYQGWALNSAGIAPIDIAGVENVDLSEIIGG-HLEYKSKIGAIVDLLQLE 498          
BLAST of mRNA_E_fasciculatus_S2_contig9032.17125.1 vs.
Match: Hypothetical (protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WFL1_9STRA)

HSP 1 Score: 167 bits (424), Expect = 3.390e-40
Identity = 110/335 (32.84%), Postives = 169/335 (50.45%), Query Frame = 3
Query:   45 RVWFWQDKLPHTDQYVLRWESDWLVTLGKSVETIVKSLSQSAMQETLKYTTLAAIMTSLAWPLALISLSSMIDADWTIGRERADVAGKILADALLNREQGCRPVTLVGTSLGARLIFACLEEIARRHELWEEQMXXXXXXXXXXXXXXXXXXXXXAGRGPSRSKMTRLKNAVTP--DNRGKSKAGLNGVGVSGGSXXXXXXXXXXKNEARCAAGVIENVCLLGAPVGATAARWERVARMAHGRVINGYSKSDVIIGLVFRAKSLSLSVSGIQKVSAVGV-------------------------ENVDLSSVVGSNHFNYNRKMPEILELLDLDN 968
            +VWFW  +   T+QY LRWES  L TLG SV  +++S S +A +E   YT  AA++ ++AWP  +I     ID  WT+  ERAD+AG++LA+ LL R  G RPVTL+G S+GARLIF+CL  + ++HE W  ++                                    A+ P   NRG  +                      KN     AG++E+V L+G PV    ++W  VA++  GR++N YS +D  +G+++R +  S +V+GI+ V+   V                         E++D+SSV+   H +Y +K+P+IL+L+ LD+
Sbjct:  758 QVWFWSQRFHGTEQYYLRWESATLTTLGSSVMELIQSASTAAAREVATYTVFAAVVAAVAWPYYIIKAFDSIDPIWTLACERADLAGQLLAETLLERAHGSRPVTLIGYSMGARLIFSCLRTLRQKHETWLAEVQEETA-------------------------------ALEPHGSNRGADERSA-----------------MFKNSP--VAGLVEDVVLMGTPV-PCGSQWTEVAKIVGGRLVNCYSATDWTLGILYRYQRWSTTVAGIRPVNPNAVDAEKLQGVDVDVDLTVNDEGAYWNLEDLDVSSVI-KYHSDYPKKIPQILDLVALDD 1040          
BLAST of mRNA_E_fasciculatus_S2_contig9032.17125.1 vs.
Match: Transmembrane (and coiled-coil domain-containing protein 4 n=3 Tax=Myotis TaxID=9434 RepID=S7QAR8_MYOBR)

HSP 1 Score: 164 bits (416), Expect = 3.950e-40
Identity = 107/310 (34.52%), Postives = 161/310 (51.94%), Query Frame = 3
Query:   81 DQYVLRWESDWLVTLGKSVETIVKSLSQSAMQETLKYTTLAAIMTSLAWPLALISLSSMIDADWTIGRERADVAGKILADALLNREQGCRPVTLVGTSLGARLIFACLEEIARRHE--------------LWEEQMXXXXXXXXXXXXXXXXXXXXXAGRGPSRSKMTRLKNAVTPDNRGKSKAGLNGVGVSGGSXXXXXXXXXXKNEARCAAGVIENVCLLGAPVGATAARWERVARMAHGRVINGYSKSDVIIGLVFRAKSLSLSVSGIQKVSAVG--VENVDLSSVVGSNHFNYNRKMPEILELLDL 962
            +QY L WE+ +L+ LG ++ETI+  L+    QE LKYT L+ I  +L WP +L+S++++ID  W +   R+   GK LA  LL+R+QG RPVTL+G SLGAR+I+ CL+E+A+  +              +  E                       A +  S  ++TR  +  +P   G+ +                       +EA    G+IE+V LLGAPV   A  WE   ++  GR+INGYS+ D ++  V+R  S  L V+G+Q V      +ENVDLSSVV S H +Y ++M  IL+ + +
Sbjct:  199 EQYCLAWEAKYLMELGNALETILSGLANIVAQEALKYTVLSGITAALTWPASLLSVANIIDNPWGVCLHRSAEVGKHLAHILLSRQQGRRPVTLIGFSLGARVIYFCLQEMAQEKDCQGIIEDVVLLGAPVEGEAKHWEPFRKVVSGRIINGYSRLIASKAHSTGRITREADVPSPGPTGRLEV----------------------SEAVDCQGIIEDVVLLGAPVEGEAKHWEPFRKVVSGRIINGYSRGDWLLSFVYRTSSAQLQVAGLQPVLLQDRRMENVDLSSVV-SGHLDYGKQMDVILKAVGI 485          
BLAST of mRNA_E_fasciculatus_S2_contig9032.17125.1 vs.
Match: Uncharacterized (protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7IQF8_9STRA)

HSP 1 Score: 163 bits (412), Expect = 6.360e-40
Identity = 104/308 (33.77%), Postives = 148/308 (48.05%), Query Frame = 3
Query:   45 RVWFWQDKLPHTDQYVLRWESDWLVTLGKSVETIV-KSLSQSAMQETLKYTTLAAIMTSLAWPLALISLSSMIDADWTIGRERADVAGKILADALLNREQGCRPVTLVGTSLGARLIFACLEEIARRHELWEEQMXXXXXXXXXXXXXXXXXXXXXAGRGPSRSKMTRLKNAVTPDNRGKSKAGLNGVGVSGGSXXXXXXXXXXKNEARCAAGVIENVCLLGAPVGATAARWERVARMAHGRVINGYSKSDVIIGLVFRAKSLSLSVSGIQKVSAVGVENVDLSSVVGSNHFNYNRKMPEILELLDLD 965
            R W W+D+ P  DQY L WE   L   GKS+ +   + +S  A  E +KYT LAA+  ++A P  ++ L+ +ID  WTI    AD +GK+LA AL  REQG RPVTLVG  +GARLIF+CL+E+A                                             N+ + D                                  + G++EN  LLG+PV    A W    RM  GR+INGYS+ D ++G+++R +  +L+ +GI  +   GVENVDLS ++G  H  Y  K+  I++LL L+
Sbjct:  313 RAWRWKDRFPQGDQYCLMWEEATLRRFGKSMRSFAAEQVSNYATTELVKYTALAALFAAVAIPRVILRLTDIIDNAWTITMNNADTSGKLLAGALRQREQGLRPVTLVGYGMGARLIFSCLKELA---------------------------------------------NSESQDE---------------------------------SCGIVENAVLLGSPVPMARADWINARRMVSGRLINGYSEKDWMLGVMYRYQGWALNSAGIAPIDIAGVENVDLSEIIGG-HLEYKSKIGAIMDLLQLE 541          
BLAST of mRNA_E_fasciculatus_S2_contig9032.17125.1 vs.
Match: Uncharacterized (protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WLI0_9STRA)

HSP 1 Score: 164 bits (414), Expect = 1.630e-39
Identity = 106/308 (34.42%), Postives = 148/308 (48.05%), Query Frame = 3
Query:   45 RVWFWQDKLPHTDQYVLRWESDWLVTLGKSVETIV-KSLSQSAMQETLKYTTLAAIMTSLAWPLALISLSSMIDADWTIGRERADVAGKILADALLNREQGCRPVTLVGTSLGARLIFACLEEIARRHELWEEQMXXXXXXXXXXXXXXXXXXXXXAGRGPSRSKMTRLKNAVTPDNRGKSKAGLNGVGVSGGSXXXXXXXXXXKNEARCAAGVIENVCLLGAPVGATAARWERVARMAHGRVINGYSKSDVIIGLVFRAKSLSLSVSGIQKVSAVGVENVDLSSVVGSNHFNYNRKMPEILELLDLD 965
            R W W+D+ P  DQY L WE   L   GKS+     + +S  A  E +KYT LAA+ T++A P A++ L+ +ID  W I    AD +GK+LA AL  REQG RPVTLVG  +GARLIF+CL+E+A+  E                                             PD                                  + G++EN  LLG+PV      W    RM  GR+INGYS+ D ++G+++R +  +L+ +GI  +   GVENVDLSS++G  H  Y  K+  I++LL L+
Sbjct:  447 RAWRWKDRFPQGDQYCLMWEEAVLRRFGKSMRRFAAEQVSSYATTEIVKYTALAALFTAVAIPRAILKLADIIDNAWVITMNAADESGKLLAGALRQREQGLRPVTLVGYGMGARLIFSCLKELAKGEE---------------------------------------------PDQ---------------------------------SCGIVENAVLLGSPVPMARDDWANARRMVSGRLINGYSEKDWMLGVMYRYQGWALNSAGIAPLDLAGVENVDLSSLIGG-HLEYKSKIGAIMDLLQLE 675          
BLAST of mRNA_E_fasciculatus_S2_contig9032.17125.1 vs.
Match: Uncharacterized (protein n=8 Tax=Phytophthora TaxID=4783 RepID=A0A6A3L8H1_9STRA)

HSP 1 Score: 164 bits (414), Expect = 2.060e-39
Identity = 103/308 (33.44%), Postives = 145/308 (47.08%), Query Frame = 3
Query:   45 RVWFWQDKLPHTDQYVLRWESDWLVTLGKSVETIV-KSLSQSAMQETLKYTTLAAIMTSLAWPLALISLSSMIDADWTIGRERADVAGKILADALLNREQGCRPVTLVGTSLGARLIFACLEEIARRHELWEEQMXXXXXXXXXXXXXXXXXXXXXAGRGPSRSKMTRLKNAVTPDNRGKSKAGLNGVGVSGGSXXXXXXXXXXKNEARCAAGVIENVCLLGAPVGATAARWERVARMAHGRVINGYSKSDVIIGLVFRAKSLSLSVSGIQKVSAVGVENVDLSSVVGSNHFNYNRKMPEILELLDLD 965
            R W W+D+ P  DQY L WE   L   GKS+ T   + +S  A  E +KYT LAA+  ++A P  +  L+ +ID  WT+    AD +GK+LADAL  REQG RPVTL+G  +GARLIF+CL+E+A+   L E                                                                              A G++EN  LLG+PV      W    R+  GR+INGYS  D ++G+++R +  +L+ +GI  +   GVENVDLS V+G  H  Y  K+  I+++L L+
Sbjct:  475 RAWRWKDRFPQGDQYCLVWEEAGLRRFGKSMRTFAAEQVSTYATAELVKYTALAALFAAIAIPRVIFRLADIIDNAWTVTMNAADASGKLLADALRQREQGLRPVTLIGYGMGARLIFSCLKELAKSDSLDE------------------------------------------------------------------------------ACGIVENAVLLGSPVPLARDDWTNARRVVSGRLINGYSDKDWMLGIMYRYQGWALNSAGIAPIDIAGVENVDLSEVIGG-HLEYKSKIGVIMDMLQLE 703          
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig9032.17125.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Uncharacterized3.190e-19889.89protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FP69... [more]
Uncharacterized3.490e-6842.62protein n=1 Tax=Tribonema minus TaxID=303371 RepID... [more]
Hypothetical4.880e-4232.84protein n=1 Tax=Rhizochromulina marina TaxID=10348... [more]
Uncharacterized7.240e-4133.76protein n=5 Tax=Nannochloropsis gaditana TaxID=725... [more]
Uncharacterized1.720e-4033.12protein n=2 Tax=Phytophthora TaxID=4783 RepID=D0NN... [more]
Hypothetical3.390e-4032.84protein n=1 Tax=Rhizochromulina marina TaxID=10348... [more]
Transmembrane3.950e-4034.52and coiled-coil domain-containing protein 4 n=3 Ta... [more]
Uncharacterized6.360e-4033.77protein n=3 Tax=Phytophthora kernoviae TaxID=32545... [more]
Uncharacterized1.630e-3934.42protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID... [more]
Uncharacterized2.060e-3933.44protein n=8 Tax=Phytophthora TaxID=4783 RepID=A0A6... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig9032contigE_fasciculatus_S2_contig9032:99..5210 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score478.4
Seed ortholog evalue2.5e-132
Seed eggNOG ortholog2880.D7FP69
Preferred nameTMCO4
Model size1774
KEGG koko:K14773
Hectar predicted targeting categorysignal peptide
GOsGO:0003674,GO:0003824,GO:0005575,GO:0006810,GO:0008150,GO:0016020,GO:0016021,GO:0016192,GO:0016298,GO:0016787,GO:0016788,GO:0031224,GO:0044425,GO:0051179,GO:0051234
Exons7
EggNOG free text desc.Protein of unknown function (DUF726)
EggNOG OGsKOG2385@1,KOG2385@2759
Cds size918
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko03009
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig9032.17125.1prot_E_fasciculatus_S2_contig9032.17125.1Ectocarpus fasciculatus EfasUO2polypeptideE_fasciculatus_S2_contig9032 785..3986 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842557.4522424-UTR-E_fasciculatus_S2_contig9032:98..7841696842557.4522424-UTR-E_fasciculatus_S2_contig9032:98..784Ectocarpus fasciculatus EfasUO2UTRE_fasciculatus_S2_contig9032 99..784 -
1696842557.5299437-UTR-E_fasciculatus_S2_contig9032:3986..40161696842557.5299437-UTR-E_fasciculatus_S2_contig9032:3986..4016Ectocarpus fasciculatus EfasUO2UTRE_fasciculatus_S2_contig9032 3987..4016 -
1696842557.5516186-UTR-E_fasciculatus_S2_contig9032:4681..47591696842557.5516186-UTR-E_fasciculatus_S2_contig9032:4681..4759Ectocarpus fasciculatus EfasUO2UTRE_fasciculatus_S2_contig9032 4682..4759 -
1696842557.566101-UTR-E_fasciculatus_S2_contig9032:5148..52101696842557.566101-UTR-E_fasciculatus_S2_contig9032:5148..5210Ectocarpus fasciculatus EfasUO2UTRE_fasciculatus_S2_contig9032 5149..5210 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842557.4767444-CDS-E_fasciculatus_S2_contig9032:784..10151696842557.4767444-CDS-E_fasciculatus_S2_contig9032:784..1015Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig9032 785..1015 -
1696842557.4913855-CDS-E_fasciculatus_S2_contig9032:1590..20041696842557.4913855-CDS-E_fasciculatus_S2_contig9032:1590..2004Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig9032 1591..2004 -
1696842557.501385-CDS-E_fasciculatus_S2_contig9032:2262..23641696842557.501385-CDS-E_fasciculatus_S2_contig9032:2262..2364Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig9032 2263..2364 -
1696842557.5107985-CDS-E_fasciculatus_S2_contig9032:3226..33281696842557.5107985-CDS-E_fasciculatus_S2_contig9032:3226..3328Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig9032 3227..3328 -
1696842557.5200999-CDS-E_fasciculatus_S2_contig9032:3917..39861696842557.5200999-CDS-E_fasciculatus_S2_contig9032:3917..3986Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig9032 3918..3986 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E_fasciculatus_S2_contig9032.17125.1

>prot_E_fasciculatus_S2_contig9032.17125.1 ID=prot_E_fasciculatus_S2_contig9032.17125.1|Name=mRNA_E_fasciculatus_S2_contig9032.17125.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=306bp
MQETLKYTTLAAIMTSLAWPLALISLSSMIDADWTIGRERADVAGKILAD
ALLNREQGCRPVTLVGTSLGARLIFACLEEIARRHELWEEQMMEAGGGQD
QWGGAAAGSSTTTAGRGPSRSKMTRLKNAVTPDNRGKSKAGLNGVGVSGG
SSNSGGGSSSSKNEARCAAGVIENVCLLGAPVGATAARWERVARMAHGRV
INGYSKSDVIIGLVFRAKSLSLSVSGIQKVSAVGVENVDLSSVVGSNHFN
YNRKMPEILELLDLDNCSKYIGPGDSAEDCSPAPPAGQRLGSDDVVVYGT
TVVPT*
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mRNA from alignment at E_fasciculatus_S2_contig9032:99..5210-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E_fasciculatus_S2_contig9032.17125.1 ID=mRNA_E_fasciculatus_S2_contig9032.17125.1|Name=mRNA_E_fasciculatus_S2_contig9032.17125.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=5112bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig9032:99..5210- (Ectocarpus fasciculatus EfasUO2)
ACAAGGGGGACCCTGAAAAGGAGGACAAGGATTTGTTGAAGCACCGGGTT TGGTTCTGGCAGGTGCGGAACTAGCTGACCGGTCTGCAACGGGGTGGTTT ACGCACGTACTGTAGTTGCCGAGCTTTTTGGCAGGAGAGTTTGCTGTGAA GATTTGGGTTCTTGTTTGCGCATCGGAGGTTCGAAGCAGAAATATAAGTG TTTTTTTTTTACCGAACCCGAGTGTCCACCATGTTTCGCGGGAGAAGACT TCGAAAACGTCCTGCACCGTTGTGCTGGGAACTTCTGTATACTTCCTTTT TGAGGTACCAGGAGCGGCAAGACCAAGTGTGGTTTGTGTACCAATATTCC AATGCGGTCGTGTTCGCTGTTTTCTGTCTGTTACACACGTTCTACTTGTC GTGCTTGCTTACCTGCTACCGTGCTTACCTGTTGCCGTGTGGCCAACTCA GGACAAGCTGCCGCACACCGACCAGTACGTGCTACGCTGGGAGAGCGACT GGCTCGTTACGCTGGGCAAGAGCGTGGAGGTAAGTATGTAAAGTACCGTG GGGCGCCAGCTACATGCGATAGCACCCTTCGGCTAGGACAAAGAGGTGGT CGCTGACTATTTCAATGCAGTTGGCGCACTAGTGCTACGGTTGCGCCCTG AAAGCGACCCGTTCGATGCGACCGTTTCAACCGCACTCTCCACGGATGAT CGATCGTCGTTCGGTCGCCGCCAGGTTTCTCAGTTTTTTTTGTCGGTTCC CGTCCGGCCAATGCGTTGGGTCGGTGTTTTGTCGGAGGGCCGCGTTTGCC GCATTAGAAAGAAAAACGCACTAGTACTATAAATCGAGTTCACCCGCATC CTAGGAAAAAGAGTACACAGGTACACACTGCCACGTAGGAACCTCTTGTC TTTGCCTGAGGCTGGCCGTTCCTTATTTTCCCTGCTGGGTAGCCCACAAA CGACTTTACAGGTGTTAGTACAATTGTATAGGAATCTTATCCGAACACCT GTTCGCATGCTCAAGTCGTTAGATTGTCCTCTATTGCAGCCTGAACTTAG TAACTCCCAAGTTATTAATTTCGTCTCGCCGTTTTGACCGAAAGCGTTTT CGAATTTCCTGGGTTGGGATACACGAGGTTCAAAAGTCACAAGGGTGCTT AACTCCAACCCCCGCGGCGTGTGTGCATCCTACCTATCGCGCAGACGATA GTCAAGAGCTTGAGCCAGAGCGCCATGCAGGAGACTCTCAAGTACACCAC TCTGGCGGCGATCATGACGTCACTAGCCTGGCCGTTGGCACTGGTGAATG TCCTCGGCAACGCTGCCGGTTTTATTTCTCTTTTTGCCCTTGCTGATGAC ACGTTCTGTTTGGCTGCGGCCTCCACACGCGTGCTCGGCGTCTTCATTCT ATGCCTGACGTGAACCTTAACCTTGACGTCCTGACGTGAACCTTAACCTT GACGTCCTGACGTGAGCCTTAACCTTGACGTCCTGACGTGAACCTTAACC TTGACGTCCTGACGTGAACCTTAACCTTGACGTCCTGACGTGAACCTCAA CCCTGACGTCCTGACGTGAACCTCAACCTTGACGTCCTGACGTGAACCTT AACCTTGACGTCCTGACGTGAACCTTAACCTTGACGTCCTGACGTGAACC TTAACCTTGACGTCACGGTCTGCTTTCTATTCGGGAGTTTTTTGTTTTTT GTTGCTGCTTCACGCTGTATGACGATGGCGCTGCCGTCCCTGCACAATCG CTACCAACACCGTCCCTCTTCAAACACGTACATCGCAATATTGTGGCGAA ATATCTTTTGATGAGCTGGAACAACTACAATGACAACAACTTTACACACT TTTTTGTCCCCGAAAAAACTTTTTCTCGCCAGATTTCGCTCTCAAGCATG ATCGACGCTGATTGGACGATCGGGAGGGAACGTGCGGACGTCGCAGGAAA GATTCTGGCCGACGCGCTGCTTAACAGGGAGCAGGTAAGATCCACAGAGG AGGCACGCCAAACCCGTACGTAGTGAATATATGCTGCTGTCTCGTGTGCG GGGCCCTCAGGACCACGACACAGTATATGAGTTCTAGTATATCACACTTA AAAGACACATGCAATATGGCCGTTTAAACGCCCAATGTAGTCCATCCCAC GCTATGCTCCGAAGCCTGGCTATCACGGTTTGAGAATGAAGTTGCTCTTT TTCCTTCTCTGTTCACGGGGGAAGTTTATTTGCTCTTCTGTCAAGCCATT TCAGGTTTATATTAACTCCATGCCTTTTTGCTCTGGAGACACACTTGACT AGCTGCTGTGGTGGATATGGTCACATCCCCGCGATGTCTGTCGAGAACGA CCCCCTTTTCTCACGTAACGACGGAAAGAATCGGGGTTGGAATTACGCCG CACATGCTTCTCTTGACGATAGAGTGCGGGATGATTACTCCAACCTAAAG TTCCTCCTCGATGTACTGATGAATTGTCCGTCGTTTTGTCCATGCATCTC TTGCGTTGTCACGTGGCCTGATCGTTCGATGACGTTATTGCTATGGGGGA TGAATGACTGCATTTCGATGGCCGGCCGAAAGTTGGAGCGAAATCTGATT TGCAGGCGTTGATGTTCGAACGATGGAAAGGTGCATCTGGAATGCGCCCC CAATCAACAGCAAAAGGCACGAGCCTCTAGAAAAGACAACAACACGAGTG ACGAACGAACTCATTAGATTGACTAAGGTCGCAATGCTTGGCTAGGTTTT TTGTACGGTAAACGTTTTCTGAGGCGGTCTGTCTGACAAGACGCTTTGCT CGTTGTTTGTTGTGTACGAACGCGTTTGGTCGCCGGCTCTCGTCAGGGGT GCCGCCCTGTCACCCTGGTGGGGACCTCTCTGGGAGCCCGGCTAATCTTC GCCTGTCTCGAGGAGATCGCTAGGCGACACGAGCTTTGGGAGGAGCAGGT GTGTTCTGCCTGGGGGCGCCGCGTATCCCCCCCCCCCCTCTCGACCTGCC ACTTCTTCAGCGGGTCTGTAGAAATTGGAGCACGAGAAGCGAATAGCCTC CCACGGCTGCCCCACGCCTGCAGGGCACAGGATCGGGGGAAAATCGCCCA GATTTGCACTCGTAGGTGTCTGTTCCACGTGTCGGACGATGCCACGGCGC CATACGTATACACGTGAACCAATTGGCTCGCGCTCTCTGCGTTTGTTTCT CGTCAGATGATGGAAGCCGGGGGGGGGCAAGACCAATGGGGCGGCGCCGC CGCCGGCTCGTCCACCACCACAGCGGGGAGAGGCCCGTCGCGAAGCAAGA TGACCCGCCTAAAGAACGCCGTAACCCCTGACAACAGGGGCAAGAGCAAG GCCGGCCTTAACGGCGTCGGCGTCTCCGGCGGCAGCAGCAACAGCGGCGG CGGTAGCAGCAGCAGCAAGAACGAGGCGAGGTGTGCGGCAGGCGTGATCG AGAACGTTTGCCTGCTCGGCGCGCCCGTGGGAGCCACCGCGGCCCGGTGG GAGCGCGTTGCGAGGATGGCCCACGGGAGGGTCATCAACGGGTACTCCAA GTCCGACGTCATCATCGGGCTTGTCTTCAGGGCCAAGAGCTTGTCGCTTT CCGTTTCCGGCATTCAAAAGGTGTGGGGCTTGCGCTCGTCAGCGGTTGGG TCGCGTGGGTGTTGTTTTTGGAAGCCCGGCATGGTCGGGCCATGTTGTGC AAGACTTCTCTCGCCGCTTGGTGTTCTCTCCCAAAGCGACCTACCTGCCT TCCTCCTGTGTAACCCCGGCTGATATGCCAGAAATGTATGCCGAAACGTG GGTAGACTGTCACCAGAATAGATGGGACGCACACGCACACAATGTACCGA GAGGTACTAAAAAAGGGACATGGTAGATGGCGCATTCCTTTCCCGCGGCG AAACTAACGCCGACGTGGCACACACACAAGACCCACACGCAGCGAGATGC ATGATCAAAACCGACAAGCTCACCAGCATGTCTCGAGCATGCCCGAGCAT GCTATGAGTATGCCATGAGTATGTCATGCCGCCCCCACGACGATTTTGTT CAGGAGTGTTGCTGTTGGCATAGACAGGGTGTACTTCGTTTTAGCATATA TGATATCAAGCTACTCTCTACAACTACTTGTGATCGATTCGCTCCCGGCG TGGCGAAACGTTTTTGTGTGCGTTGCTGTACCTGCGTGATTCCAGGTGTC GGCGGTGGGCGTAGAGAACGTCGACCTGTCCTCAGTAGTCGGGTCCAACC ACTTCAACTACAACCGCAAGATGCCAGAGATCCTGGAGCTGCTGGATCTT GACAACTGCTCCAAGTATATCGGCCCTGGCGACTCCGCCGAGGACTGCTC TCCAGCTCCGCCGGCCGGACAGCGTTTGGGGAGCGATGACGTCGTGGTGT ACGGTACTACCGTAGTTCCAACGTAAAGTAAAGCTCACACCAGGTGGAAT GTGATACACATGACGAATCCGTCTTACGTCTACGTGTAGCAGAGCTGTCT CTTGTATGACGTGAGGAGGAGCCGTCGAATGTTATGACACGAGCTAAAAG CCATCTCTTGTGGGATATGCGGCAGAGCCGCCTCCTTGATGACATGAGTC AAAAGCCGTCTTATGTATGACATGTAGCAGAGCCACCTCGCATGGCATGA GAAATACCCGTGGCTTGTGGCAAAGCCGTCTTCTGTATGGCACGAGCCCA AGCTGTCTCATACAGGCTATGCGGCAAAGCCGGCATATCCGGGGGTGTAT CGTGTCGGTCGATGAAAAATCATGATTATGTACCGAAGCCATACCTTGTT TTTTCTTGAAGTGCCTGAGCATTCCTCTCTTACTGCAGTACTGTAGGTGC AATGGATGTAGGCGATCGTGTAGATTGACGTTGGTGGCTGGTTGTATGTT CACTGTCGTTTAGGAAGCTCCGTGAAGGACCAAATACCCAATTTGCGAAC TGTTCCTCAATTGCAAGTTGGGGTTTCTGCTGCTGCGACAAAAAAAACTA CTACGCATACATTGAAACAGAAATCCAGTCTCAGAAGACCTTTTGTTCCC GGCCCAGGGACTGACCGTTCAAATCATGTCATTTGGGGGCGGTCGACCAG GAATTACAGTAC
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Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig9032:99..5210-

>mRNA_E_fasciculatus_S2_contig9032.17125.1 ID=mRNA_E_fasciculatus_S2_contig9032.17125.1|Name=mRNA_E_fasciculatus_S2_contig9032.17125.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=918bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig9032:99..5210- (Ectocarpus fasciculatus EfasUO2)
ATGCAGGAGACTCTCAAGTACACCACTCTGGCGGCGATCATGACGTCACT
AGCCTGGCCGTTGGCACTGATTTCGCTCTCAAGCATGATCGACGCTGATT
GGACGATCGGGAGGGAACGTGCGGACGTCGCAGGAAAGATTCTGGCCGAC
GCGCTGCTTAACAGGGAGCAGGGGTGCCGCCCTGTCACCCTGGTGGGGAC
CTCTCTGGGAGCCCGGCTAATCTTCGCCTGTCTCGAGGAGATCGCTAGGC
GACACGAGCTTTGGGAGGAGCAGATGATGGAAGCCGGGGGGGGGCAAGAC
CAATGGGGCGGCGCCGCCGCCGGCTCGTCCACCACCACAGCGGGGAGAGG
CCCGTCGCGAAGCAAGATGACCCGCCTAAAGAACGCCGTAACCCCTGACA
ACAGGGGCAAGAGCAAGGCCGGCCTTAACGGCGTCGGCGTCTCCGGCGGC
AGCAGCAACAGCGGCGGCGGTAGCAGCAGCAGCAAGAACGAGGCGAGGTG
TGCGGCAGGCGTGATCGAGAACGTTTGCCTGCTCGGCGCGCCCGTGGGAG
CCACCGCGGCCCGGTGGGAGCGCGTTGCGAGGATGGCCCACGGGAGGGTC
ATCAACGGGTACTCCAAGTCCGACGTCATCATCGGGCTTGTCTTCAGGGC
CAAGAGCTTGTCGCTTTCCGTTTCCGGCATTCAAAAGGTGTCGGCGGTGG
GCGTAGAGAACGTCGACCTGTCCTCAGTAGTCGGGTCCAACCACTTCAAC
TACAACCGCAAGATGCCAGAGATCCTGGAGCTGCTGGATCTTGACAACTG
CTCCAAGTATATCGGCCCTGGCGACTCCGCCGAGGACTGCTCTCCAGCTC
CGCCGGCCGGACAGCGTTTGGGGAGCGATGACGTCGTGGTGTACGGTACT
ACCGTAGTTCCAACGTAA
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