prot_E_fasciculatus_S2_contig898.17071.1 (polypeptide) Ectocarpus fasciculatus EfasUO2

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_E_fasciculatus_S2_contig898.17071.1
Unique Name	prot_E_fasciculatus_S2_contig898.17071.1
Type	polypeptide
Organism	Ectocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Sequence length	258

Homology

[Close]

BLAST of mRNA_E_fasciculatus_S2_contig898.17071.1 vs. uniprot
Match: D8LQP8_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LQP8_ECTSI)

HSP 1 Score: 442 bits (1138), Expect = 6.590e-156
Identity = 232/260 (89.23%), Postives = 236/260 (90.77%), Query Frame = 0

Query:    1 MMDWVSSKATRLASLLLLSQACVLCSGFVPGAPPAASPYLAHHTKFGTDTSTTSAAGYDIFRAL--GSKRSGTADAVTSSPRRGSMSRLSMSMSPAPPVKPPKKRTGGGG-NGDELFVRELIEPEKSVILTSWRDYAQRDGSEKFVESIEILNKMVAWRSGVVAARKRRFTLACCKGSSVQAVACVQIGPKNESVRSFLAQEACMSVCLLNVDPSSPKFKAGAHLCREIKDIGKLENMAVTFDPIKDIYSGRFYAATLAM 257
            MMDWVSSKATRL  LLLLSQACVLCSGFVPG  P+ASPYLAHH KF  DTSTTSAAGYD FRAL  GSKRSGTADAVTSSPRRG +SRLSMSMSP+PPVKP          NGDELFVRELIEPEKSVILTSWRDYAQRDG EKF E IEILNKMVAWRSGVVAARKRRFTLACCKGSSVQAVACVQIGPKNESVRSFLAQEACMSVCLLNVDPSSPKFKAGAHLCREIKDIGKLENMAV+FDPIKDIYSGRFYAATLAM
Sbjct:    1 MMDWVSSKATRLVILLLLSQACVLCSGFVPGVSPSASPYLAHHAKFSPDTSTTSAAGYDFFRALTLGSKRSGTADAVTSSPRRGPISRLSMSMSPSPPVKPXXXXXXXXXXNGDELFVRELIEPEKSVILTSWRDYAQRDGGEKFAECIEILNKMVAWRSGVVAARKRRFTLACCKGSSVQAVACVQIGPKNESVRSFLAQEACMSVCLLNVDPSSPKFKAGAHLCREIKDIGKLENMAVSFDPIKDIYSGRFYAATLAM 260

[Close]

BLAST of mRNA_E_fasciculatus_S2_contig898.17071.1 vs. uniprot
Match: A0A835YR80_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YR80_9STRA)

HSP 1 Score: 149 bits (377), Expect = 1.110e-41
Identity = 72/169 (42.60%), Postives = 110/169 (65.09%), Query Frame = 0

Query:   94 APPVKPPK-KRTGGGGNGDELFVRELIEPEKSVILTSWRDYAQRDGSE----KFVESIEILNKMVAWRSGVVAARKRRFTLACCKGSSVQAVACVQIGPKNESVRSFLAQEACMSVCLLNVDPSSPKFKAGAHLCREIKDIGKLENMAVTFDPIKDIYSGRFYAATLAM 257
            +PP KPP+ K+ GGGGN  + ++R++ + EK ++L  W  Y++R   E    +  E +++  KM AWR G   ARKRRF LA C+G +V AV CVQIGP N S  +F+ Q+  M+V  + V PS  K  AG  L +++K+IG+ + + V F+P+K++Y GRFY A+++M
Sbjct:    5 SPPTKPPELKKYGGGGN--DPYIRDIDDEEKQLVLGGWIGYSRRIAMEEEDPRLEEFMQVCRKMQAWRRGTGGARKRRFALAACQGDNVDAVVCVQIGPDNRSFAAFITQDMVMTVGFIAVSPSRAKLGAGTFLVKQLKEIGRAQGIRVDFEPLKEVYKGRFYLASISM 171

The following BLAST results are available for this feature:

BLAST of mRNA_E_fasciculatus_S2_contig898.17071.1 vs. uniprot

BLAST of mRNA_E_fasciculatus_S2_contig898.17071.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
D8LQP8_ECTSI	6.590e-156	89.23	Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2...	[more]
A0A835YR80_9STRA	1.110e-41	42.60	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_N_REGION	Signal peptide N-region	coord: 1..11
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_C_REGION	Signal peptide C-region	coord: 24..31
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_H_REGION	Signal peptide H-region	coord: 12..23
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 32..257
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE	Signal Peptide	coord: 1..31
None	No IPR available	SIGNALP_EUK	SignalP-noTM	SignalP-noTM	coord: 1..27 score: 0.722

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
E_fasciculatus_S2_contig898	contig	E_fasciculatus_S2_contig898:17322..20293 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2	2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90	2022-09-16
OGS1.0 of Ectocarpus fasciculatus EfasUO2	2022-07-07

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_E_fasciculatus_S2_contig898.17071.1	mRNA_E_fasciculatus_S2_contig898.17071.1	Ectocarpus fasciculatus EfasUO2	mRNA	E_fasciculatus_S2_contig898 16892..21453 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_E_fasciculatus_S2_contig898.17071.1 ID=prot_E_fasciculatus_S2_contig898.17071.1|Name=mRNA_E_fasciculatus_S2_contig898.17071.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=258bp
MMDWVSSKATRLASLLLLSQACVLCSGFVPGAPPAASPYLAHHTKFGTDT
STTSAAGYDIFRALGSKRSGTADAVTSSPRRGSMSRLSMSMSPAPPVKPP
KKRTGGGGNGDELFVRELIEPEKSVILTSWRDYAQRDGSEKFVESIEILN
KMVAWRSGVVAARKRRFTLACCKGSSVQAVACVQIGPKNESVRSFLAQEA
CMSVCLLNVDPSSPKFKAGAHLCREIKDIGKLENMAVTFDPIKDIYSGRF
YAATLAM*