mRNA_E_fasciculatus_S2_contig8852.16947.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig8852.16947.1 vs.
Match: Protein (kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8N7_9PHAE) HSP 1 Score: 244 bits (622), Expect = 1.350e-76 Identity = 113/115 (98.26%), Postives = 114/115 (99.13%), Query Frame = 3
Query: 3 TTNLGTVAWAAPEMLRGGEGGRAEYTAKVDVYSFGVVMWELWERRRPFEDLRSRFDIADTVAAGGRPPIGRGCPPPYADLIRRCWHQDPTKRPFFQDVVEDLEAEIEAAQAVTEL 347
TTNLGTVAWAAPEMLRGGEGGRAEYTAKVDVYSFGVVMWELWERRRPFEDLR+RFDIADTVA GGRPPIGRGCPPPYADLIRRCWHQDPTKRPFFQDVVEDLEAEIEAAQAVTEL
Sbjct: 319 TTNLGTVAWAAPEMLRGGEGGRAEYTAKVDVYSFGVVMWELWERRRPFEDLRNRFDIADTVATGGRPPIGRGCPPPYADLIRRCWHQDPTKRPFFQDVVEDLEAEIEAAQAVTEL 433
BLAST of mRNA_E_fasciculatus_S2_contig8852.16947.1 vs.
Match: Protein (kinase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTH4_ECTSI) HSP 1 Score: 246 bits (629), Expect = 1.850e-72 Identity = 115/115 (100.00%), Postives = 115/115 (100.00%), Query Frame = 3
Query: 3 TTNLGTVAWAAPEMLRGGEGGRAEYTAKVDVYSFGVVMWELWERRRPFEDLRSRFDIADTVAAGGRPPIGRGCPPPYADLIRRCWHQDPTKRPFFQDVVEDLEAEIEAAQAVTEL 347
TTNLGTVAWAAPEMLRGGEGGRAEYTAKVDVYSFGVVMWELWERRRPFEDLRSRFDIADTVAAGGRPPIGRGCPPPYADLIRRCWHQDPTKRPFFQDVVEDLEAEIEAAQAVTEL
Sbjct: 2083 TTNLGTVAWAAPEMLRGGEGGRAEYTAKVDVYSFGVVMWELWERRRPFEDLRSRFDIADTVAAGGRPPIGRGCPPPYADLIRRCWHQDPTKRPFFQDVVEDLEAEIEAAQAVTEL 2197
BLAST of mRNA_E_fasciculatus_S2_contig8852.16947.1 vs.
Match: Protein (kinase domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SNM6_9ARCH) HSP 1 Score: 139 bits (350), Expect = 2.290e-35 Identity = 61/118 (51.69%), Postives = 82/118 (69.49%), Query Frame = 3
Query: 3 TTNLGTVAWAAPEMLRGGEGGRAEYTAKVDVYSFGVVMWELWERRRPFEDLRSRFDIADTVAAGGRPPIGRGCPPPYADLIRRCWHQDPTKRPFFQDVVEDLEAEIEAAQAVTEL*PN 356
T+N+GT AW APE+L R +Y+ KVDVYSFG+V+WELWE++RPF++L+SRFDI D V AG RP I CPP + LI+RCWH DP++RP F +V L+ E+ + L P+
Sbjct: 195 TSNMGTTAWCAPEILTASN--RTKYSVKVDVYSFGMVLWELWEKKRPFDELQSRFDIMDAVRAGKRPTISDNCPPAFKALIQRCWHTDPSRRPMFHYIVRYLKDELARVKRQKTLPPS 310
BLAST of mRNA_E_fasciculatus_S2_contig8852.16947.1 vs.
Match: SIS8 (protein (Fragment) n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812V665_SYMMI) HSP 1 Score: 131 bits (329), Expect = 3.560e-32 Identity = 58/106 (54.72%), Postives = 73/106 (68.87%), Query Frame = 3
Query: 3 TTNLGTVAWAAPEMLRGGEGGRAEYTAKVDVYSFGVVMWELWERRRPFEDLRSRFDIADTVAAGGRPPIGRGCPPPYADLIRRCWHQDPTKRPFFQDVVEDLEAEI 320
T+NLGT AW APE+L + Y+ KVDVYSFG+V+WELWER+RP+EDL SRFDI D V G RP I CPP LI+RCWH+ P +RP F +V ++ E+
Sbjct: 674 TSNLGTTAWCAPELLTAMN--KTRYSVKVDVYSFGMVLWELWERKRPYEDLYSRFDIIDAVREGRRPTISSTCPPTLRSLIQRCWHEQPARRPTFAYIVRYVKDEL 777
BLAST of mRNA_E_fasciculatus_S2_contig8852.16947.1 vs.
Match: Hypothetical (protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1Z0F9_9STRA) HSP 1 Score: 124 bits (311), Expect = 9.690e-30 Identity = 60/107 (56.07%), Postives = 74/107 (69.16%), Query Frame = 3
Query: 3 TTNLGTVAWAAPEMLRGGEGGRAEYTAKVDVYSFGVVMWELWERRRPFEDLRSRFDIADTVAAGGRPPIGRGCPPPYADLIRRCWHQDPTKRPFFQDVVEDLEAEIE 323
T+N+GTVAWAAPEML + RA Y +VDVYSFG+V+WEL+E ++PF ++ SRFDI D V G RPPI CP Y DLI +C QDP RP F +V LE E+E
Sbjct: 702 TSNMGTVAWAAPEMLA--KESRANYGLQVDVYSFGMVLWELYECKQPFSEMLSRFDIMDAVRKGVRPPISPSCPELYKDLIIKCVSQDPKLRPTFSFIVNRLERELE 806
BLAST of mRNA_E_fasciculatus_S2_contig8852.16947.1 vs.
Match: Hypothetical (protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4V0N7_9STRA) HSP 1 Score: 124 bits (311), Expect = 1.050e-29 Identity = 60/107 (56.07%), Postives = 74/107 (69.16%), Query Frame = 3
Query: 3 TTNLGTVAWAAPEMLRGGEGGRAEYTAKVDVYSFGVVMWELWERRRPFEDLRSRFDIADTVAAGGRPPIGRGCPPPYADLIRRCWHQDPTKRPFFQDVVEDLEAEIE 323
T+N+GTVAWAAPEML + RA Y +VDVYSFG+V+WEL+E ++PF ++ SRFDI D V G RPPI CP Y DLI +C QDP RP F +V LE E+E
Sbjct: 1538 TSNMGTVAWAAPEMLA--KESRANYGLQVDVYSFGMVLWELYECKQPFSEMLSRFDIMDAVRKGVRPPISPSCPELYKDLIIKCVSQDPKLRPTFSFIVNRLERELE 1642
BLAST of mRNA_E_fasciculatus_S2_contig8852.16947.1 vs.
Match: Hypothetical (protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2JXS2_9STRA) HSP 1 Score: 115 bits (289), Expect = 9.520e-27 Identity = 59/107 (55.14%), Postives = 69/107 (64.49%), Query Frame = 3
Query: 3 TTNLGTVAWAAPEMLRGGEGGRAEYTAKVDVYSFGVVMWELWERRRPFEDLRSRFDIADTVAAGGRPPIGR-GCPPPYADLIRRCWHQDPTKRPFFQDVVEDLEAEI 320
TT +GTVAWAAPEML + YT KVD YSFGVV+WELWER RPF +SRF I D V G RP I R GCP Y LI C +DP+ RP F +V+ L+ E+
Sbjct: 1662 TTLVGTVAWAAPEMLV--HEAKTNYTLKVDQYSFGVVLWELWERARPFSQYKSRFAIMDAVRDGERPRISRPGCPDGYKRLIGMCLQEDPSARPTFSYIVKKLKDEL 1766
BLAST of mRNA_E_fasciculatus_S2_contig8852.16947.1 vs.
Match: Uncharacterized (protein n=2 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7GX63_9STRA) HSP 1 Score: 113 bits (283), Expect = 5.230e-26 Identity = 48/107 (44.86%), Postives = 75/107 (70.09%), Query Frame = 3
Query: 3 TTNLGTVAWAAPEMLRGGEGGRAEYTAKVDVYSFGVVMWELWERRRPFEDLR-SRFDIADTVAAGGRPPIGRGCPPPYADLIRRCWHQDPTKRPFFQDVVEDLEAEI 320
TTN+G+ WAAPE+L+ + +EY+ K+DVYSFG++ W+L+ P+ D+ S +A+ V +G RPPI GCP +A +++RCWH +P +RP F+D+V+ LE E+
Sbjct: 524 TTNIGSACWAAPEVLK--DAATSEYSVKIDVYSFGIICWQLYTCAVPYSDIPGSVLAVAEAVLSGVRPPIPAGCPRLFAKIMKRCWHDNPLRRPSFEDIVQLLEIEL 628
BLAST of mRNA_E_fasciculatus_S2_contig8852.16947.1 vs.
Match: Uncharacterized (protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CNT0_PYTOL) HSP 1 Score: 113 bits (283), Expect = 5.680e-26 Identity = 51/107 (47.66%), Postives = 74/107 (69.16%), Query Frame = 3
Query: 3 TTNLGTVAWAAPEMLRGGEGGRAEYTAKVDVYSFGVVMWELWERRRPFEDLR-SRFDIADTVAAGGRPPIGRGCPPPYADLIRRCWHQDPTKRPFFQDVVEDLEAEI 320
TTN+G+ WAAPE+L+ + EY+ KVDVYSFGV+ W+L+ + P+ D+ S +A+ V AG RP I CP +A ++RRCWH+DP +RP F+D+V+ LE E+
Sbjct: 761 TTNIGSACWAAPEVLKDEDS--TEYSLKVDVYSFGVICWQLYTCKSPYTDIPGSVLALAEAVIAGRRPEIPADCPTLFAKIMRRCWHEDPVRRPNFEDIVQLLEMEL 865
BLAST of mRNA_E_fasciculatus_S2_contig8852.16947.1 vs.
Match: Hypothetical (protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BNC5_9STRA) HSP 1 Score: 109 bits (273), Expect = 1.880e-25 Identity = 57/110 (51.82%), Postives = 70/110 (63.64%), Query Frame = 3
Query: 3 TTNLGTVAWAAPEMLRGGEGGRAEYTAKVDVYSFGVVMWELWERRRPFEDLRSRFDIADTVAAGGRPPIGRGCPPPYADLIRRCWHQDPTKRPFFQDVVEDLEAEIEAAQ 332
T+NLGT A+AAPEML + R Y+ KVDVYSFG+V+WE+ ER+ PF +L+SRFDI + V G RP I C YA+L R C P RP F +V LE E E AQ
Sbjct: 191 TSNLGTTAYAAPEMLVPAK--RTHYSLKVDVYSFGMVLWEMLERQPPFMELKSRFDIMEAVVEGRRPLIHASCSDGYANLFRWCVAHAPQDRPTFPFIVRKLEDEAERAQ 298 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig8852.16947.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig8852.16947.1 >prot_E_fasciculatus_S2_contig8852.16947.1 ID=prot_E_fasciculatus_S2_contig8852.16947.1|Name=mRNA_E_fasciculatus_S2_contig8852.16947.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=103bp MLRGGEGGRAEYTAKVDVYSFGVVMWELWERRRPFEDLRSRFDIADTVAAback to top mRNA from alignment at E_fasciculatus_S2_contig8852:1785..3219+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig8852.16947.1 ID=mRNA_E_fasciculatus_S2_contig8852.16947.1|Name=mRNA_E_fasciculatus_S2_contig8852.16947.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=1435bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig8852:1785..3219+ (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig8852:1785..3219+ >mRNA_E_fasciculatus_S2_contig8852.16947.1 ID=mRNA_E_fasciculatus_S2_contig8852.16947.1|Name=mRNA_E_fasciculatus_S2_contig8852.16947.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=309bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig8852:1785..3219+ (Ectocarpus fasciculatus EfasUO2)back to top |