mRNA_E_fasciculatus_S2_contig8689.16796.1 (mRNA) Ectocarpus fasciculatus EfasUO2

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E_fasciculatus_S2_contig8689.16796.1
Unique NamemRNA_E_fasciculatus_S2_contig8689.16796.1
TypemRNA
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Homology
BLAST of mRNA_E_fasciculatus_S2_contig8689.16796.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7C1_ECTSI)

HSP 1 Score: 618 bits (1594), Expect = 3.540e-209
Identity = 435/580 (75.00%), Postives = 449/580 (77.41%), Query Frame = 1
Query:  142 QSLRLRQLVEERQLVVGTSGAKDWTNIARKIPPKTDLQCMLHWNHVINPELTKGKGSWKQEEDERIMQLVEHHGKKWSVIATQLKAENGKMTRVGKQIRERYLHHLDPNLKKGDWSVQEEEVLVREHGIHKNKWAQIAKSLPGRCSNDIKNHWYAHERRQREISRASTSSTAA-ATETPPIVVQRTTRPFPISMSPHLARILPAPAPPRQVLSESEDGXXXXXXXXXVGEVLLERPQESPTSAAPGAPVDSHFLGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLLLQQPAGDYDPTHVAGSGGXXXXXXXXXXXXXXGSIDDHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGTDAGGDMVGPVPTAEEDVDPGQDFGLPLAKRARIDGGDHSGGGGG--DAGGEGHDMLIGGSGVGSVGVSDVEDENTVADSFVGSGFGSDEHAAVGAGXXXXXXXDGGRIDDDVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---SASAVARLEEHH---AGIGSDGEDGHNGVDGGDADCVFSGWDRLRNE 1854
            QSLRLRQLVEERQLVVGTSGAKDWTNIARKIPPKTDLQCMLHWNHVINPELTKGKGSWKQEEDERI+QLVEHHGKKWSVIA+QLKAENGKMTRVGKQIRERYLHHLDPNLKKGDWSV+EEE+LVREHGIHKNKWAQIAKSLPGRCSNDIKNHWYAHERRQREISRASTSSTAA AT TPPIVVQRT RPFP+S +P+L          RQVLSES+ G         VG VLLERPQE P SAAPG P D HFLGG                               GLLLQQPAGDYDPTHVAGSGGXXXXXXXXXXXXXX  +DDH      XXXXXXXXXXXXXXXXXXXXXXXXXGTDAGG +VGPVP+AEE+VDP QDFGLPLAKRARIDGGD         D GGEGHDMLI GSGV SVGV DVEDENTVADSFVGSGFGSD+HAAV AGXXXXXXX   RIDDDV             XXXXXXXXXXXXX                XXXXXXXXXXXX      S SA ARLEEHH   AGIGSDGE GH+GVDGGDADCVF GWDRLR E
Sbjct:  369 QSLRLRQLVEERQLVVGTSGAKDWTNIARKIPPKTDLQCMLHWNHVINPELTKGKGSWKQEEDERIIQLVEHHGKKWSVIASQLKAENGKMTRVGKQIRERYLHHLDPNLKKGDWSVEEEEILVREHGIHKNKWAQIAKSLPGRCSNDIKNHWYAHERRQREISRASTSSTAATATGTPPIVVQRTARPFPMSANPYL----------RQVLSESKHGGEHHHSGG-VGGVLLERPQEPPISAAPGGPGDGHFLGGVVVDCGGAPEQHEESVEVEDRHRDGSIDD--GLLLQQPAGDYDPTHVAGSGGXXXXXXXXXXXXXX-XMDDHDHGDMMXXXXXXXXXXXXXXXXXXXXXXXXXGTDAGGVLVGPVPSAEEEVDPEQDFGLPLAKRARIDGGDXXXXXXXXXDPGGEGHDMLIDGSGVSSVGVGDVEDENTVADSFVGSGFGSDDHAAVDAGXXXXXXXXXXRIDDDVVGAGSGVMDHFGAXXXXXXXXXXXXXGGLERFEDAGTIGDGDXXXXXXXXXXXXVDNGGGSPSAAARLEEHHRHHAGIGSDGEGGHDGVDGGDADCVFPGWDRLRTE 934          
BLAST of mRNA_E_fasciculatus_S2_contig8689.16796.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNI5_9PHAE)

HSP 1 Score: 396 bits (1017), Expect = 3.210e-127
Identity = 373/638 (58.46%), Postives = 384/638 (60.19%), Query Frame = 1
Query:  106 MPPVVYHRWTQEQSLRLRQLVEERQLVVGTSGAKDWTNIARKIPPKTDLQCMLHWNHVINPELTKGKGSWKQEEDERIMQLVEHHGKKWSVIATQLKAENGKMTRVGKQIRERYLHHLDPNLKKGDWSVQEEEVLVREHGIHKNKWAQIAKSLPGRCSNDIKNHWYAHERRQREISRASTSSTA-AATETPPIVVQRTTRPFPISMSPHLARILPAPAPP---------------------------------------------RQVLSESEDGXXXXXXXXXVGEVLLERPQESPTSAAPGAPVDSHFLGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLLLQQPAGDYDPTHVAGSGGXXXXXXXXXXXXXXGSIDDHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGTDAGGDMVGPVPTAEEDVDPGQDFGLPLAKRARIDGGDHSGGGGGDA---GGEGHDMLIGGSGVGSVGVSDVEDENTVADSFVGSGFGSDEHAAVGAGXXXXXXXDGGRIDDDVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---SASAVARLEEHH---AGIGSDGEDGHNGVDGGDADCVFSGWDRLRNE 1854
            MPPVVY RWTQEQSLRLRQLVEER+LVVGTSGAKDWTNIARK                                      LVEHHGKKWSVIA+QLKAENGKMTRVGKQIRERYLHHLDPNLKKGDWSV+E    VR        W  +   LP      + +  YAHERRQREISRAS SST  AATETPPIVVQRT RPFP+S +P+LARILPAP PP                                             RQVLSESEDGXXXXXXXXX                      D HFLG  XXXXXXXX                      GLLLQQPAGDYDPTHVAGSGG    XXXXXXXXXXG IDDH      XXXXXXXXXXXXXXXXXXXXXXXXXGTDAGG MVGPV TAEE+VDPGQDFGLPLAKRARIDGGD            GGEGH MLI GSGVGS GV DVEDENTVADSFVGSGFGSDEH AV AG XXXXXX G RIDDDV                 XXXXX                   XXXXXXXXXXXXX      S SAVARLEEHH   AGIGSD          GDADCVF GWDRLR+E
Sbjct:    1 MPPVVYQRWTQEQSLRLRQLVEERRLVVGTSGAKDWTNIARK--------------------------------------LVEHHGKKWSVIASQLKAENGKMTRVGKQIRERYLHHLDPNLKKGDWSVEE----VR--------WLSVI--LPVHIPVPV-HMLYAHERRQREISRASASSTXXAATETPPIVVQRTARPFPMSANPYLARILPAPPPPVLVSAPLAASPVASXXXXXXXXXXXXXXXXXXXXXXXDIPPLIEQRQVLSESEDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXG-DCHFLG--XXXXXXXXAPEQHEESVEVEDRHGDGSIDDGLLLQQPAGDYDPTHVAGSGGDGGHXXXXXXXXXXG-IDDHDHGDMMXXXXXXXXXXXXXXXXXXXXXXXXXGTDAGGVMVGPVATAEEEVDPGQDFGLPLAKRARIDGGDXXXXXXXXXXXPGGEGHHMLIDGSGVGSAGVGDVEDENTVADSFVGSGFGSDEHPAVDAGGXXXXXX-GDRIDDDVVGAGSGVMDHFSATEIGXXXXXGEDGGGLERFEQAGTIGDGXXXXXXXXXXXXXVDNGGGSLSAVARLEEHHRHHAGIGSDXXXXXXXXXXGDADCVFPGWDRLRSE 580          
BLAST of mRNA_E_fasciculatus_S2_contig8689.16796.1 vs.
Match: transcriptional (activator Myb isoform X2 n=1 Tax=Sphaerodactylus townsendi TaxID=933632 RepID=UPI002025CB90)

HSP 1 Score: 158 bits (399), Expect = 1.220e-37
Identity = 91/209 (43.54%), Postives = 128/209 (61.24%), Query Frame = 1
Query:  127 RWTQEQSLRLRQLVEERQLVVGTSGAKDWTNIARKIPPKTDLQCMLHWNHVINPELTKGKGSWKQEEDERIMQLVEHHG-KKWSVIATQLKAENGKMTRVGKQIRERYLHHLDPNLKKGDWSVQEEEVLVREHGIHKNKWAQIAKSLPGRCSNDIKNHWYAHERRQ-------REISRASTSSTAAA----------TETPPIVVQRTT 699
            RWT+E+  +L+QLVE+       +G +DW  IA  +P +TD+QC   W  V+NPEL KG   W +EED+R+++LV+ +G K+WSVIA  LK       R+GKQ RER+ +HL+P +KK  W+ +E+ ++ + H    N+WA+IAK LPGR  N IKNHW +  RR+       +E S+AS SS AA+          T TPP V   TT
Sbjct:   42 RWTREEDEKLKQLVEQ-------NGTEDWKVIANFLPNRTDVQCQHRWQKVLNPELIKGP--WTKEEDQRVIELVQKYGPKRWSVIAKHLKG------RIGKQCRERWHNHLNPEVKKTSWTEEEDRIIYQAHKRLGNRWAEIAKLLPGRTDNAIKNHWNSTMRRKVEQEGYLQESSKASQSSVAASFQKSNHLMGYTPTPPSVQLPTT 235          
BLAST of mRNA_E_fasciculatus_S2_contig8689.16796.1 vs.
Match: MYB (proto-oncogene, transcription factor n=2 Tax=Chelonoidis abingdonii TaxID=106734 RepID=A0A8C0H5G6_CHEAB)

HSP 1 Score: 152 bits (385), Expect = 2.570e-37
Identity = 81/187 (43.32%), Postives = 120/187 (64.17%), Query Frame = 1
Query:  127 RWTQEQSLRLRQLVEERQLVVGTSGAKDWTNIARKIPPKTDLQCMLHWNHVINPELTKGKGSWKQEEDERIMQLVEHHG-KKWSVIATQLKAENGKMTRVGKQIRERYLHHLDPNLKKGDWSVQEEEVLVREHGIHKNKWAQIAKSLPGRCSNDIKNHWYAHERRQ-------REISRASTSSTAAA 663
            RWT+E+  +L++LVE+       +G +DW  IA  +P +TD+QC   W  V+NPEL KG   W +EED+R+++LV+ +G K+WSVIA  LK       R+GKQ RER+ +HL+P +KK  W+ +E+ ++ + H    N+WA+IAK LPGR  N IKNHW +  RR+       +E S+A+ SS A +
Sbjct:   42 RWTREEDEKLKKLVEQ-------NGTEDWKVIANFLPNRTDVQCQHRWQKVLNPELIKGP--WTKEEDQRVIELVQKYGPKRWSVIAKHLKG------RIGKQCRERWHNHLNPEVKKTSWTEEEDRIIYQAHKRLGNRWAEIAKLLPGRTDNAIKNHWNSTMRRKVEQEGYLQESSKANQSSLAGS 213          
BLAST of mRNA_E_fasciculatus_S2_contig8689.16796.1 vs.
Match: myb-related (protein 3R-1 n=1 Tax=Theobroma cacao TaxID=3641 RepID=UPI000848E8B2)

HSP 1 Score: 150 bits (378), Expect = 3.660e-37
Identity = 78/172 (45.35%), Postives = 106/172 (61.63%), Query Frame = 1
Query:  130 WTQEQSLRLRQLVEERQLVVGTSGAKDWTNIARKIPPKTDLQCMLHWNHVINPELTKGKGSWKQEEDERIMQLVEHHGKK-WSVIATQLKAENGKMTRVGKQIRERYLHHLDPNLKKGDWSVQEEEVLVREHGIHKNKWAQIAKSLPGRCSNDIKNHWYAHERRQREISRAS 642
            WT+E+   L   V++          K+W  IA  +P +TD+QC+  W  V+NP+L KG   W +EEDE I +LVE  GKK WS IA  L        R+GKQ RER+ +HL+P++KK  W+ +EE VL+R HG + N+WA+IAK LPGR  N IKNHW    +++ EI  AS
Sbjct:   45 WTEEEDKMLTTAVQK-------FNGKNWKKIAECVPDRTDVQCLHRWQKVLNPDLVKGP--WSKEEDELIFELVEKQGKKKWSEIAKYLPG------RIGKQCRERWFNHLNPDIKKTAWTEEEELVLIRAHGTYGNRWAEIAKLLPGRTENSIKNHWNCSVKKKVEILAAS 201          
BLAST of mRNA_E_fasciculatus_S2_contig8689.16796.1 vs.
Match: Isoform (12 of Transcriptional activator Myb n=7 Tax=Hominidae TaxID=9604 RepID=P10242-12)

HSP 1 Score: 150 bits (380), Expect = 3.730e-37
Identity = 76/168 (45.24%), Postives = 110/168 (65.48%), Query Frame = 1
Query:  127 RWTQEQSLRLRQLVEERQLVVGTSGAKDWTNIARKIPPKTDLQCMLHWNHVINPELTKGKGSWKQEEDERIMQLVEHHG-KKWSVIATQLKAENGKMTRVGKQIRERYLHHLDPNLKKGDWSVQEEEVLVREHGIHKNKWAQIAKSLPGRCSNDIKNHWYAHERRQRE 627
            RWT+E+  +L++LVE+       +G  DW  IA  +P +TD+QC   W  V+NPEL KG   W +EED+R+++LV+ +G K+WSVIA  LK       R+GKQ RER+ +HL+P +KK  W+ +E+ ++ + H    N+WA+IAK LPGR  N IKNHW +  RR+ E
Sbjct:   42 RWTREEDEKLKKLVEQ-------NGTDDWKVIANYLPNRTDVQCQHRWQKVLNPELIKGP--WTKEEDQRVIELVQKYGPKRWSVIAKHLKG------RIGKQCRERWHNHLNPEVKKTSWTEEEDRIIYQAHKRLGNRWAEIAKLLPGRTDNAIKNHWNSTMRRKVE 194          
BLAST of mRNA_E_fasciculatus_S2_contig8689.16796.1 vs.
Match: transcriptional (activator Myb isoform X3 n=2 Tax=Sphaerodactylus townsendi TaxID=933632 RepID=UPI002026C068)

HSP 1 Score: 158 bits (399), Expect = 4.200e-37
Identity = 91/209 (43.54%), Postives = 128/209 (61.24%), Query Frame = 1
Query:  127 RWTQEQSLRLRQLVEERQLVVGTSGAKDWTNIARKIPPKTDLQCMLHWNHVINPELTKGKGSWKQEEDERIMQLVEHHG-KKWSVIATQLKAENGKMTRVGKQIRERYLHHLDPNLKKGDWSVQEEEVLVREHGIHKNKWAQIAKSLPGRCSNDIKNHWYAHERRQ-------REISRASTSSTAAA----------TETPPIVVQRTT 699
            RWT+E+  +L+QLVE+       +G +DW  IA  +P +TD+QC   W  V+NPEL KG   W +EED+R+++LV+ +G K+WSVIA  LK       R+GKQ RER+ +HL+P +KK  W+ +E+ ++ + H    N+WA+IAK LPGR  N IKNHW +  RR+       +E S+AS SS AA+          T TPP V   TT
Sbjct:   42 RWTREEDEKLKQLVEQ-------NGTEDWKVIANFLPNRTDVQCQHRWQKVLNPELIKGP--WTKEEDQRVIELVQKYGPKRWSVIAKHLKG------RIGKQCRERWHNHLNPEVKKTSWTEEEDRIIYQAHKRLGNRWAEIAKLLPGRTDNAIKNHWNSTMRRKVEQEGYLQESSKASQSSVAASFQKSNHLMGYTPTPPSVQLPTT 235          
BLAST of mRNA_E_fasciculatus_S2_contig8689.16796.1 vs.
Match: Myb-related (protein A n=2 Tax=Aphidini TaxID=33387 RepID=A0A2S2NFC6_SCHGA)

HSP 1 Score: 154 bits (389), Expect = 5.650e-37
Identity = 78/169 (46.15%), Postives = 111/169 (65.68%), Query Frame = 1
Query:  127 RWTQEQSLRLRQLVEERQLVVGTSGAKDWTNIARKIPPKTDLQCMLHWNHVINPELTKGKGSWKQEEDERIMQLVEHHG-KKWSVIATQLKAENGKMTRVGKQIRERYLHHLDPNLKKGDWSVQEEEVLVREHGIHKNKWAQIAKSLPGRCSNDIKNHWYAHERRQREI 630
            RWT+E+ +RL+QLVEE Q        + W  IA+    ++D+QC   W+ V+NP+L KG   W +EEDE +++LVE +G KKW++IA  LK       R+GKQ RER+ +HL+PN+KK  W+ +E+ ++ R H    N+WA+IAK LPGR  N IKNHW +  RR+ EI
Sbjct:  108 RWTKEEDMRLKQLVEEYQ--------ERWDLIAQHFNDRSDIQCQQRWHKVVNPDLVKGP--WTKEEDETVLELVEKYGPKKWTLIARHLKG------RIGKQCRERWHNHLNPNIKKSAWTDEEDRIIFRAHSQWGNQWAKIAKLLPGRTDNAIKNHWNSTMRRKYEI 260          
BLAST of mRNA_E_fasciculatus_S2_contig8689.16796.1 vs.
Match: MYB (proto-oncogene, transcription factor n=6 Tax=Boreoeutheria TaxID=1437010 RepID=A0A2K6DQZ6_MACNE)

HSP 1 Score: 150 bits (380), Expect = 5.820e-37
Identity = 76/168 (45.24%), Postives = 110/168 (65.48%), Query Frame = 1
Query:  127 RWTQEQSLRLRQLVEERQLVVGTSGAKDWTNIARKIPPKTDLQCMLHWNHVINPELTKGKGSWKQEEDERIMQLVEHHG-KKWSVIATQLKAENGKMTRVGKQIRERYLHHLDPNLKKGDWSVQEEEVLVREHGIHKNKWAQIAKSLPGRCSNDIKNHWYAHERRQRE 627
            RWT+E+  +L++LVE+       +G  DW  IA  +P +TD+QC   W  V+NPEL KG   W +EED+R+++LV+ +G K+WSVIA  LK       R+GKQ RER+ +HL+P +KK  W+ +E+ ++ + H    N+WA+IAK LPGR  N IKNHW +  RR+ E
Sbjct:   42 RWTREEDEKLKKLVEQ-------NGTDDWKVIANYLPNRTDVQCQHRWQKVLNPELIKGP--WTKEEDQRVIELVQKYGPKRWSVIAKHLKG------RIGKQCRERWHNHLNPEVKKTSWTEEEDRIIYQAHKRLGNRWAEIAKLLPGRTDNAIKNHWNSTMRRKVE 194          
BLAST of mRNA_E_fasciculatus_S2_contig8689.16796.1 vs.
Match: MYB (proto-oncogene, transcription factor n=8 Tax=Catarrhini TaxID=9526 RepID=A0A2K5ZVK3_MANLE)

HSP 1 Score: 150 bits (380), Expect = 5.950e-37
Identity = 76/168 (45.24%), Postives = 110/168 (65.48%), Query Frame = 1
Query:  127 RWTQEQSLRLRQLVEERQLVVGTSGAKDWTNIARKIPPKTDLQCMLHWNHVINPELTKGKGSWKQEEDERIMQLVEHHG-KKWSVIATQLKAENGKMTRVGKQIRERYLHHLDPNLKKGDWSVQEEEVLVREHGIHKNKWAQIAKSLPGRCSNDIKNHWYAHERRQRE 627
            RWT+E+  +L++LVE+       +G  DW  IA  +P +TD+QC   W  V+NPEL KG   W +EED+R+++LV+ +G K+WSVIA  LK       R+GKQ RER+ +HL+P +KK  W+ +E+ ++ + H    N+WA+IAK LPGR  N IKNHW +  RR+ E
Sbjct:   43 RWTREEDEKLKKLVEQ-------NGTDDWKVIANYLPNRTDVQCQHRWQKVLNPELIKGP--WTKEEDQRVIELVQKYGPKRWSVIAKHLKG------RIGKQCRERWHNHLNPEVKKTSWTEEEDRIIYQAHKRLGNRWAEIAKLLPGRTDNAIKNHWNSTMRRKVE 195          
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig8689.16796.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Uncharacterized3.540e-20975.00protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
Uncharacterized3.210e-12758.46protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
transcriptional1.220e-3743.54activator Myb isoform X2 n=1 Tax=Sphaerodactylus t... [more]
MYB2.570e-3743.32proto-oncogene, transcription factor n=2 Tax=Chelo... [more]
myb-related3.660e-3745.35protein 3R-1 n=1 Tax=Theobroma cacao TaxID=3641 Re... [more]
Isoform3.730e-3745.2412 of Transcriptional activator Myb n=7 Tax=Homini... [more]
transcriptional4.200e-3743.54activator Myb isoform X3 n=2 Tax=Sphaerodactylus t... [more]
Myb-related5.650e-3746.15protein A n=2 Tax=Aphidini TaxID=33387 RepID=A0A2S... [more]
MYB5.820e-3745.24proto-oncogene, transcription factor n=6 Tax=Boreo... [more]
MYB5.950e-3745.24proto-oncogene, transcription factor n=8 Tax=Catar... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig8689contigE_fasciculatus_S2_contig8689:553..4609 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start0
Seed ortholog score622.1
Seed ortholog evalue2.8e-175
Seed eggNOG ortholog2880.D7G7C1
Model size1870
KEGG koko:K09422
Hectar predicted targeting categoryother localisation
Exons6
EggNOG free text desc.RNA polymerase II transcription regulator recruiting activity
EggNOG OGsCOG5147@1,KOG0048@2759
Cds size1869
COG Functional cat.ADK
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko03000
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig8689.16796.1prot_E_fasciculatus_S2_contig8689.16796.1Ectocarpus fasciculatus EfasUO2polypeptideE_fasciculatus_S2_contig8689 553..4609 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842525.3627872-CDS-E_fasciculatus_S2_contig8689:552..16591696842525.3627872-CDS-E_fasciculatus_S2_contig8689:552..1659Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8689 553..1659 -
1696842525.3778107-CDS-E_fasciculatus_S2_contig8689:1800..19631696842525.3778107-CDS-E_fasciculatus_S2_contig8689:1800..1963Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8689 1801..1963 -
1696842525.3931117-CDS-E_fasciculatus_S2_contig8689:2390..24911696842525.3931117-CDS-E_fasciculatus_S2_contig8689:2390..2491Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8689 2391..2491 -
1696842525.4039588-CDS-E_fasciculatus_S2_contig8689:2827..29801696842525.4039588-CDS-E_fasciculatus_S2_contig8689:2827..2980Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8689 2828..2980 -
1696842525.4151049-CDS-E_fasciculatus_S2_contig8689:3901..40151696842525.4151049-CDS-E_fasciculatus_S2_contig8689:3901..4015Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8689 3902..4015 -
1696842525.4262958-CDS-E_fasciculatus_S2_contig8689:4378..46091696842525.4262958-CDS-E_fasciculatus_S2_contig8689:4378..4609Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8689 4379..4609 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E_fasciculatus_S2_contig8689.16796.1

>prot_E_fasciculatus_S2_contig8689.16796.1 ID=prot_E_fasciculatus_S2_contig8689.16796.1|Name=mRNA_E_fasciculatus_S2_contig8689.16796.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=623bp
QQLQQQQQQQQQQQQESTTTPASAPTPAPVSAPAAMPPVVYHRWTQEQSL
RLRQLVEERQLVVGTSGAKDWTNIARKIPPKTDLQCMLHWNHVINPELTK
GKGSWKQEEDERIMQLVEHHGKKWSVIATQLKAENGKMTRVGKQIRERYL
HHLDPNLKKGDWSVQEEEVLVREHGIHKNKWAQIAKSLPGRCSNDIKNHW
YAHERRQREISRASTSSTAAATETPPIVVQRTTRPFPISMSPHLARILPA
PAPPRQVLSESEDGGDHHHGGGGVGEVLLERPQESPTSAAPGAPVDSHFL
GGVVVDGGGGAPEQQEESVEVEDRRRLSSSIDDGLLLQQPAGDYDPTHVA
GSGGDGGNGGGSGGGGDDGSIDDHDHRDMMMMIMASHAMPLPPPPAPAEA
PAPAPGTDAGGDMVGPVPTAEEDVDPGQDFGLPLAKRARIDGGDHSGGGG
GDAGGEGHDMLIGGSGVGSVGVSDVEDENTVADSFVGSGFGSDEHAAVGA
GGGGGGGGDGGRIDDDVVGAGSGVMDHFGATEIGGDGGDGGGLERFEESG
TIGDGDLERFEPAEATGDVDNGGGSASAVARLEEHHAGIGSDGEDGHNGV
DGGDADCVFSGWDRLRNEHSPR*
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mRNA from alignment at E_fasciculatus_S2_contig8689:553..4609-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E_fasciculatus_S2_contig8689.16796.1 ID=mRNA_E_fasciculatus_S2_contig8689.16796.1|Name=mRNA_E_fasciculatus_S2_contig8689.16796.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=4057bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig8689:553..4609- (Ectocarpus fasciculatus EfasUO2)
CAGCAGCTGCAGCAGCAACAACAGCAGCAGCAGCAGCAGCAGCAAGAATC GACTACGACGCCGGCTTCGGCTCCGACGCCTGCGCCCGTATCCGCGCCGG CAGCAATGCCTCCCGTGGTGTATCATCGGTGGACGCAGGAGCAGAGCTTG CGCTTAAGGCAGCTGGTGGAGGAGAGACAGCTGGTGGTCGGCACCTCTGG GGCGAAGGACTGGACGAACATCGCGAGGAAGGTGTGTGTAGGCCGGAGAA GGAAAAACACGATAGATCCAATAGGGAGATGAGGACGATTCGAGGGAGAG GAAATAGGATCTCGTTCGGACAAGGCTTGTAGATCGCGCATCTTTTTAGG TCGCAGCAAGAACAGCAACAGGATAAGCGGAGACCGATCGGCAGCACCTG GGATGAGGAGGCCCAGGCTAATGGGTGGCACGGCCGCTCAAGCTCATACA GGCTGTTCTCAGAGCCATGCAACACCGCTCGTCATTGGTAGACGTCAACG TTTCTGCTCCGCAACCGCGGCCCCCGCTTGCTAACTTCGTTCCTGATTTT TGTTTTTTCGCTGCGTGCTTGTGACGCTGTGCTGCTTTCGGTAGATTCCG CCAAAGACGGATCTCCAGTGCATGCTCCACTGGAACCACGTGATCAACCC GGAACTGACGAAGGGCAAGGGTTCGTGGAAGCAGGAAGAGGACGAGAGGA TAATGCAGGTACATACCCCGTTGTGGTTGCCGTAGTTGTGGTTGCGGTTC GGGTTGCTGGTTGTGGCTGCTGGTTGTGGTCGGGGCTGTGGTTGTAGGTG TGGTTGTATTGTGGTCGTGGGGTGTGGTTGTAGTCGTAACTGTGGTTGTA GTTGTAACTGTGGTTGTAGTTGTAACTGTGGTTGTAGTTGTAACTGTGGT TGCAGTCGTGGTTGTGGTTGCTGTTGTCAGTTGTTGACTGTACGTGGTGA TGGTGTTTCTGTTGAGGGTGTCGCTCGCGATTCATGAAGGCGTGACAGCT GATACGTTCGAACTGGCTTGTCGCGACCCTCTACCCGATCTGGCGCCGCA AAACATGCACCACACTGAGGTATTGGGGAAGACGAGCTCCGATCAGGGGA AAACATACCTTTTGTTTCCTCTGCAGTAGCGCGCGATCATTCGGTACGAT ATCGCCAAGTGTTAACGAAATTGGCTGGGTGTCGCGTCAGCTACACGCTC TTGAACCCAGCAGGAAAAGCTTGGAAGGACACGAAGGTATGCTGGGCTGT ATGAGCGTCTAGAAAGTGCCCGGAATAGTCCTGTCCCCTTTTGCGATTTC CTCGGGACGTATCACCACTAAAGAAATGAGCTGTTTGCTGTCTCGAGGAG TTTATTTCTCTCCTACGCATCCGTCGCCCGGCGATAGTTTCATGACAATT TTCCATCTATCAAATATCCGTCCAAGTCGCGTCCGCATCCCCCCCCCGAT GCTGCGTGTAGCCGTTTCGCCCTCACTCACTGGACACCCTGCCTCCGTAC ACCATGGAAACCCTCTCGTCCCTCCGTGTCACCTGGCCCGACCAAGTTAA TCTTCAATAGCCCAACTCATCAAGTTGTCCCTACCCGTCCCCTCCCTTGG ATCTGCCCGCCGGAACACTACACCACCAGCTGGTGGAGCATCACGGCAAG AAGTGGAGCGTTATCGCGACCCAGCTCAAGGCAGAGAATGGCAAGATGAC GCGCGTCGGCAAGCAGATCCGGGAGAGGTACCTGCACCACCTGGACCCGA ACCTCAAGAAGGGGGACTGGTCCGTGCAAGAGGTGCGGTTGAAGTTGTCT TGTCATTGTGCCTGTTGTGCGTGTATGCGGAGGGAGATCGTGCTATTGTC TTTGGGTGTGACGTACGGGCCTGTTCACAACCTTGGTGCCACTGCACGGG GGGGAGTCGTGTTTTTTATCTTTGTGCTCGGGCCGGACACACGTGCTTGC TCACATCCTGTGGCCTGTTCACATGCTTGTGCCATTTTACGCGGCACACA CGTGCGTGTTGACAATCCTTGTGGCAGTGGGGATCGTGCCTGTCACTGTC ATGATTCAATTTGGACATGACACCACGCCGTTGCTGTGTGATTTTGCCGG GTTTTCTAATTTTTTCAGGAGGAAGTTCTTGTCCGGGAGCACGGTATTCA TAAGAATAAGTGGGCGCAGATCGCCAAGTCTCTCCCGGGGCGCTGCTCCA ACGACATCAAGAACCATTGGTGAGGGCCGGAGAAGGGGAGGGAGATAGAG TGAGAGTTGAGAAACACAGATATAGCGGGACATGCCCAGAGAGCGAGAGC GAGAGGCGGAGAGTGAGAGGGAGGCGAGAAAGAGTGAGAGAAACAAAAGA GAGTGAGAGGAAACAAGAGAGAGTGCGGGGCTCGCTGGGTGTGTGAAGTT TTCCTATTACCGACGTGGACCACCGATATGTTAACCGAGGCCCACGCAAG TACGTCATTTTGCCAAGTCTTTGAATGAGTCGTCGCAACAAGTCGGGGTT GTGGTGTACACACAGCGTCCCTTGAAAGCACCGACAAAGGGAACAACGAA GACTGCTGCTGCCGCTCCGCTGCCGCTCCGCTGCTAGCAGACTGCTAACT CCCGTCCCCCCGGCCATGTTATCTCCATATCCGTTCTTCGGTACAGGTAT GCGCACGAGCGACGGCAGAGGGAGATCTCGCGGGCTTCCACGTCGTCGAC GGCCGCGGCGACGGAGACCCCGCCCATCGTCGTACAACGCACAACACGGC CTTTCCCCATCTCCATGAGCCCTCATCTGGCGAGAATACTGCCTGCTCCC GCCCCTCCGGTGTTCGTCTCAGCGCCCTCGGCCGCCGCCGCCCCCGTTTC TTCACCCCCAGCCCCCGCTTCCGCACCCCCGGCCCTTGCTGCCGCCCCCC CTGCTGCTCCCGCCCCGGCCCCTGCCGATATCCCGCCGCTCATTGAGCAG CGGCAAGTTCTGTCGGAGTCGGAGGATGGCGGGGATCATCACCATGGCGG CGGCGGTGTCGGCGAGGTGCTGCTGGAGCGGCCGCAGGAGTCGCCGACTT CGGCGGCGCCGGGGGCCCCGGTAGACAGTCATTTCCTCGGGGGGGTGGTC GTCGACGGCGGCGGGGGCGCCCCCGAGCAGCAAGAGGAGTCCGTTGAGGT GGAAGACAGACGCCGACTCAGCAGCAGCATCGACGACGGCTTGCTCCTCC AACAGCCGGCGGGAGACTACGACCCCACTCACGTCGCCGGGAGCGGCGGC GACGGGGGCAACGGCGGCGGCAGCGGCGGCGGTGGAGACGACGGCAGTAT TGACGACCATGATCACCGCGACATGATGATGATGATAATGGCTTCGCACG CCATGCCGCTGCCGCCGCCACCAGCGCCGGCGGAGGCCCCGGCACCCGCC CCGGGAACGGATGCCGGGGGTGATATGGTGGGCCCTGTGCCAACGGCGGA AGAAGACGTTGATCCAGGGCAGGATTTCGGGTTGCCGCTTGCCAAACGCG CTCGGATTGATGGCGGCGATCACAGCGGCGGCGGCGGCGGCGACGCGGGC GGGGAGGGTCACGATATGCTGATTGGCGGCAGTGGCGTCGGCAGTGTGGG TGTGAGTGATGTAGAAGACGAGAACACCGTTGCTGATAGCTTCGTGGGAA GCGGGTTCGGCAGCGATGAGCACGCGGCCGTGGGTGCCGGCGGTGGCGGT GGTGGCGGTGGGGATGGCGGCCGGATTGATGACGACGTGGTCGGAGCCGG CAGCGGTGTGATGGACCACTTCGGCGCGACAGAGATTGGCGGCGACGGCG GCGACGGCGGGGGCCTGGAAAGGTTCGAAGAATCCGGGACCATCGGTGAC GGCGACCTCGAGAGGTTCGAGCCGGCGGAGGCAACGGGGGACGTCGATAA CGGCGGTGGGAGTGCCTCCGCTGTAGCCCGCCTTGAAGAACACCACGCCG GCATCGGTTCTGATGGCGAAGACGGCCACAACGGTGTTGACGGAGGCGAC GCAGATTGCGTGTTCTCTGGGTGGGACAGACTCAGGAACGAGCACTCGCC ACGTTGA
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Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig8689:553..4609-

>mRNA_E_fasciculatus_S2_contig8689.16796.1 ID=mRNA_E_fasciculatus_S2_contig8689.16796.1|Name=mRNA_E_fasciculatus_S2_contig8689.16796.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=1869bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig8689:553..4609- (Ectocarpus fasciculatus EfasUO2)
CAGCAGCTGCAGCAGCAACAACAGCAGCAGCAGCAGCAGCAGCAAGAATC
GACTACGACGCCGGCTTCGGCTCCGACGCCTGCGCCCGTATCCGCGCCGG
CAGCAATGCCTCCCGTGGTGTATCATCGGTGGACGCAGGAGCAGAGCTTG
CGCTTAAGGCAGCTGGTGGAGGAGAGACAGCTGGTGGTCGGCACCTCTGG
GGCGAAGGACTGGACGAACATCGCGAGGAAGATTCCGCCAAAGACGGATC
TCCAGTGCATGCTCCACTGGAACCACGTGATCAACCCGGAACTGACGAAG
GGCAAGGGTTCGTGGAAGCAGGAAGAGGACGAGAGGATAATGCAGCTGGT
GGAGCATCACGGCAAGAAGTGGAGCGTTATCGCGACCCAGCTCAAGGCAG
AGAATGGCAAGATGACGCGCGTCGGCAAGCAGATCCGGGAGAGGTACCTG
CACCACCTGGACCCGAACCTCAAGAAGGGGGACTGGTCCGTGCAAGAGGA
GGAAGTTCTTGTCCGGGAGCACGGTATTCATAAGAATAAGTGGGCGCAGA
TCGCCAAGTCTCTCCCGGGGCGCTGCTCCAACGACATCAAGAACCATTGG
TATGCGCACGAGCGACGGCAGAGGGAGATCTCGCGGGCTTCCACGTCGTC
GACGGCCGCGGCGACGGAGACCCCGCCCATCGTCGTACAACGCACAACAC
GGCCTTTCCCCATCTCCATGAGCCCTCATCTGGCGAGAATACTGCCTGCT
CCCGCCCCTCCGCGGCAAGTTCTGTCGGAGTCGGAGGATGGCGGGGATCA
TCACCATGGCGGCGGCGGTGTCGGCGAGGTGCTGCTGGAGCGGCCGCAGG
AGTCGCCGACTTCGGCGGCGCCGGGGGCCCCGGTAGACAGTCATTTCCTC
GGGGGGGTGGTCGTCGACGGCGGCGGGGGCGCCCCCGAGCAGCAAGAGGA
GTCCGTTGAGGTGGAAGACAGACGCCGACTCAGCAGCAGCATCGACGACG
GCTTGCTCCTCCAACAGCCGGCGGGAGACTACGACCCCACTCACGTCGCC
GGGAGCGGCGGCGACGGGGGCAACGGCGGCGGCAGCGGCGGCGGTGGAGA
CGACGGCAGTATTGACGACCATGATCACCGCGACATGATGATGATGATAA
TGGCTTCGCACGCCATGCCGCTGCCGCCGCCACCAGCGCCGGCGGAGGCC
CCGGCACCCGCCCCGGGAACGGATGCCGGGGGTGATATGGTGGGCCCTGT
GCCAACGGCGGAAGAAGACGTTGATCCAGGGCAGGATTTCGGGTTGCCGC
TTGCCAAACGCGCTCGGATTGATGGCGGCGATCACAGCGGCGGCGGCGGC
GGCGACGCGGGCGGGGAGGGTCACGATATGCTGATTGGCGGCAGTGGCGT
CGGCAGTGTGGGTGTGAGTGATGTAGAAGACGAGAACACCGTTGCTGATA
GCTTCGTGGGAAGCGGGTTCGGCAGCGATGAGCACGCGGCCGTGGGTGCC
GGCGGTGGCGGTGGTGGCGGTGGGGATGGCGGCCGGATTGATGACGACGT
GGTCGGAGCCGGCAGCGGTGTGATGGACCACTTCGGCGCGACAGAGATTG
GCGGCGACGGCGGCGACGGCGGGGGCCTGGAAAGGTTCGAAGAATCCGGG
ACCATCGGTGACGGCGACCTCGAGAGGTTCGAGCCGGCGGAGGCAACGGG
GGACGTCGATAACGGCGGTGGGAGTGCCTCCGCTGTAGCCCGCCTTGAAG
AACACCACGCCGGCATCGGTTCTGATGGCGAAGACGGCCACAACGGTGTT
GACGGAGGCGACGCAGATTGCGTGTTCTCTGGGTGGGACAGACTCAGGAA
CGAGCACTCGCCACGTTGA
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