mRNA_E_fasciculatus_S2_contig8689.16796.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig8689.16796.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7C1_ECTSI) HSP 1 Score: 618 bits (1594), Expect = 3.540e-209 Identity = 435/580 (75.00%), Postives = 449/580 (77.41%), Query Frame = 1
Query: 142 QSLRLRQLVEERQLVVGTSGAKDWTNIARKIPPKTDLQCMLHWNHVINPELTKGKGSWKQEEDERIMQLVEHHGKKWSVIATQLKAENGKMTRVGKQIRERYLHHLDPNLKKGDWSVQEEEVLVREHGIHKNKWAQIAKSLPGRCSNDIKNHWYAHERRQREISRASTSSTAA-ATETPPIVVQRTTRPFPISMSPHLARILPAPAPPRQVLSESEDGXXXXXXXXXVGEVLLERPQESPTSAAPGAPVDSHFLGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLLLQQPAGDYDPTHVAGSGGXXXXXXXXXXXXXXGSIDDHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGTDAGGDMVGPVPTAEEDVDPGQDFGLPLAKRARIDGGDHSGGGGG--DAGGEGHDMLIGGSGVGSVGVSDVEDENTVADSFVGSGFGSDEHAAVGAGXXXXXXXDGGRIDDDVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---SASAVARLEEHH---AGIGSDGEDGHNGVDGGDADCVFSGWDRLRNE 1854
QSLRLRQLVEERQLVVGTSGAKDWTNIARKIPPKTDLQCMLHWNHVINPELTKGKGSWKQEEDERI+QLVEHHGKKWSVIA+QLKAENGKMTRVGKQIRERYLHHLDPNLKKGDWSV+EEE+LVREHGIHKNKWAQIAKSLPGRCSNDIKNHWYAHERRQREISRASTSSTAA AT TPPIVVQRT RPFP+S +P+L RQVLSES+ G VG VLLERPQE P SAAPG P D HFLGG GLLLQQPAGDYDPTHVAGSGGXXXXXXXXXXXXXX +DDH XXXXXXXXXXXXXXXXXXXXXXXXXGTDAGG +VGPVP+AEE+VDP QDFGLPLAKRARIDGGD D GGEGHDMLI GSGV SVGV DVEDENTVADSFVGSGFGSD+HAAV AGXXXXXXX RIDDDV XXXXXXXXXXXXX XXXXXXXXXXXX S SA ARLEEHH AGIGSDGE GH+GVDGGDADCVF GWDRLR E
Sbjct: 369 QSLRLRQLVEERQLVVGTSGAKDWTNIARKIPPKTDLQCMLHWNHVINPELTKGKGSWKQEEDERIIQLVEHHGKKWSVIASQLKAENGKMTRVGKQIRERYLHHLDPNLKKGDWSVEEEEILVREHGIHKNKWAQIAKSLPGRCSNDIKNHWYAHERRQREISRASTSSTAATATGTPPIVVQRTARPFPMSANPYL----------RQVLSESKHGGEHHHSGG-VGGVLLERPQEPPISAAPGGPGDGHFLGGVVVDCGGAPEQHEESVEVEDRHRDGSIDD--GLLLQQPAGDYDPTHVAGSGGXXXXXXXXXXXXXX-XMDDHDHGDMMXXXXXXXXXXXXXXXXXXXXXXXXXGTDAGGVLVGPVPSAEEEVDPEQDFGLPLAKRARIDGGDXXXXXXXXXDPGGEGHDMLIDGSGVSSVGVGDVEDENTVADSFVGSGFGSDDHAAVDAGXXXXXXXXXXRIDDDVVGAGSGVMDHFGAXXXXXXXXXXXXXGGLERFEDAGTIGDGDXXXXXXXXXXXXVDNGGGSPSAAARLEEHHRHHAGIGSDGEGGHDGVDGGDADCVFPGWDRLRTE 934
BLAST of mRNA_E_fasciculatus_S2_contig8689.16796.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNI5_9PHAE) HSP 1 Score: 396 bits (1017), Expect = 3.210e-127 Identity = 373/638 (58.46%), Postives = 384/638 (60.19%), Query Frame = 1
Query: 106 MPPVVYHRWTQEQSLRLRQLVEERQLVVGTSGAKDWTNIARKIPPKTDLQCMLHWNHVINPELTKGKGSWKQEEDERIMQLVEHHGKKWSVIATQLKAENGKMTRVGKQIRERYLHHLDPNLKKGDWSVQEEEVLVREHGIHKNKWAQIAKSLPGRCSNDIKNHWYAHERRQREISRASTSSTA-AATETPPIVVQRTTRPFPISMSPHLARILPAPAPP---------------------------------------------RQVLSESEDGXXXXXXXXXVGEVLLERPQESPTSAAPGAPVDSHFLGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLLLQQPAGDYDPTHVAGSGGXXXXXXXXXXXXXXGSIDDHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGTDAGGDMVGPVPTAEEDVDPGQDFGLPLAKRARIDGGDHSGGGGGDA---GGEGHDMLIGGSGVGSVGVSDVEDENTVADSFVGSGFGSDEHAAVGAGXXXXXXXDGGRIDDDVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---SASAVARLEEHH---AGIGSDGEDGHNGVDGGDADCVFSGWDRLRNE 1854
MPPVVY RWTQEQSLRLRQLVEER+LVVGTSGAKDWTNIARK LVEHHGKKWSVIA+QLKAENGKMTRVGKQIRERYLHHLDPNLKKGDWSV+E VR W + LP + + YAHERRQREISRAS SST AATETPPIVVQRT RPFP+S +P+LARILPAP PP RQVLSESEDGXXXXXXXXX D HFLG XXXXXXXX GLLLQQPAGDYDPTHVAGSGG XXXXXXXXXXG IDDH XXXXXXXXXXXXXXXXXXXXXXXXXGTDAGG MVGPV TAEE+VDPGQDFGLPLAKRARIDGGD GGEGH MLI GSGVGS GV DVEDENTVADSFVGSGFGSDEH AV AG XXXXXX G RIDDDV XXXXX XXXXXXXXXXXXX S SAVARLEEHH AGIGSD GDADCVF GWDRLR+E
Sbjct: 1 MPPVVYQRWTQEQSLRLRQLVEERRLVVGTSGAKDWTNIARK--------------------------------------LVEHHGKKWSVIASQLKAENGKMTRVGKQIRERYLHHLDPNLKKGDWSVEE----VR--------WLSVI--LPVHIPVPV-HMLYAHERRQREISRASASSTXXAATETPPIVVQRTARPFPMSANPYLARILPAPPPPVLVSAPLAASPVASXXXXXXXXXXXXXXXXXXXXXXXDIPPLIEQRQVLSESEDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXG-DCHFLG--XXXXXXXXAPEQHEESVEVEDRHGDGSIDDGLLLQQPAGDYDPTHVAGSGGDGGHXXXXXXXXXXG-IDDHDHGDMMXXXXXXXXXXXXXXXXXXXXXXXXXGTDAGGVMVGPVATAEEEVDPGQDFGLPLAKRARIDGGDXXXXXXXXXXXPGGEGHHMLIDGSGVGSAGVGDVEDENTVADSFVGSGFGSDEHPAVDAGGXXXXXX-GDRIDDDVVGAGSGVMDHFSATEIGXXXXXGEDGGGLERFEQAGTIGDGXXXXXXXXXXXXXVDNGGGSLSAVARLEEHHRHHAGIGSDXXXXXXXXXXGDADCVFPGWDRLRSE 580
BLAST of mRNA_E_fasciculatus_S2_contig8689.16796.1 vs.
Match: transcriptional (activator Myb isoform X2 n=1 Tax=Sphaerodactylus townsendi TaxID=933632 RepID=UPI002025CB90) HSP 1 Score: 158 bits (399), Expect = 1.220e-37 Identity = 91/209 (43.54%), Postives = 128/209 (61.24%), Query Frame = 1
Query: 127 RWTQEQSLRLRQLVEERQLVVGTSGAKDWTNIARKIPPKTDLQCMLHWNHVINPELTKGKGSWKQEEDERIMQLVEHHG-KKWSVIATQLKAENGKMTRVGKQIRERYLHHLDPNLKKGDWSVQEEEVLVREHGIHKNKWAQIAKSLPGRCSNDIKNHWYAHERRQ-------REISRASTSSTAAA----------TETPPIVVQRTT 699
RWT+E+ +L+QLVE+ +G +DW IA +P +TD+QC W V+NPEL KG W +EED+R+++LV+ +G K+WSVIA LK R+GKQ RER+ +HL+P +KK W+ +E+ ++ + H N+WA+IAK LPGR N IKNHW + RR+ +E S+AS SS AA+ T TPP V TT
Sbjct: 42 RWTREEDEKLKQLVEQ-------NGTEDWKVIANFLPNRTDVQCQHRWQKVLNPELIKGP--WTKEEDQRVIELVQKYGPKRWSVIAKHLKG------RIGKQCRERWHNHLNPEVKKTSWTEEEDRIIYQAHKRLGNRWAEIAKLLPGRTDNAIKNHWNSTMRRKVEQEGYLQESSKASQSSVAASFQKSNHLMGYTPTPPSVQLPTT 235
BLAST of mRNA_E_fasciculatus_S2_contig8689.16796.1 vs.
Match: MYB (proto-oncogene, transcription factor n=2 Tax=Chelonoidis abingdonii TaxID=106734 RepID=A0A8C0H5G6_CHEAB) HSP 1 Score: 152 bits (385), Expect = 2.570e-37 Identity = 81/187 (43.32%), Postives = 120/187 (64.17%), Query Frame = 1
Query: 127 RWTQEQSLRLRQLVEERQLVVGTSGAKDWTNIARKIPPKTDLQCMLHWNHVINPELTKGKGSWKQEEDERIMQLVEHHG-KKWSVIATQLKAENGKMTRVGKQIRERYLHHLDPNLKKGDWSVQEEEVLVREHGIHKNKWAQIAKSLPGRCSNDIKNHWYAHERRQ-------REISRASTSSTAAA 663
RWT+E+ +L++LVE+ +G +DW IA +P +TD+QC W V+NPEL KG W +EED+R+++LV+ +G K+WSVIA LK R+GKQ RER+ +HL+P +KK W+ +E+ ++ + H N+WA+IAK LPGR N IKNHW + RR+ +E S+A+ SS A +
Sbjct: 42 RWTREEDEKLKKLVEQ-------NGTEDWKVIANFLPNRTDVQCQHRWQKVLNPELIKGP--WTKEEDQRVIELVQKYGPKRWSVIAKHLKG------RIGKQCRERWHNHLNPEVKKTSWTEEEDRIIYQAHKRLGNRWAEIAKLLPGRTDNAIKNHWNSTMRRKVEQEGYLQESSKANQSSLAGS 213
BLAST of mRNA_E_fasciculatus_S2_contig8689.16796.1 vs.
Match: myb-related (protein 3R-1 n=1 Tax=Theobroma cacao TaxID=3641 RepID=UPI000848E8B2) HSP 1 Score: 150 bits (378), Expect = 3.660e-37 Identity = 78/172 (45.35%), Postives = 106/172 (61.63%), Query Frame = 1
Query: 130 WTQEQSLRLRQLVEERQLVVGTSGAKDWTNIARKIPPKTDLQCMLHWNHVINPELTKGKGSWKQEEDERIMQLVEHHGKK-WSVIATQLKAENGKMTRVGKQIRERYLHHLDPNLKKGDWSVQEEEVLVREHGIHKNKWAQIAKSLPGRCSNDIKNHWYAHERRQREISRAS 642
WT+E+ L V++ K+W IA +P +TD+QC+ W V+NP+L KG W +EEDE I +LVE GKK WS IA L R+GKQ RER+ +HL+P++KK W+ +EE VL+R HG + N+WA+IAK LPGR N IKNHW +++ EI AS
Sbjct: 45 WTEEEDKMLTTAVQK-------FNGKNWKKIAECVPDRTDVQCLHRWQKVLNPDLVKGP--WSKEEDELIFELVEKQGKKKWSEIAKYLPG------RIGKQCRERWFNHLNPDIKKTAWTEEEELVLIRAHGTYGNRWAEIAKLLPGRTENSIKNHWNCSVKKKVEILAAS 201
BLAST of mRNA_E_fasciculatus_S2_contig8689.16796.1 vs.
Match: Isoform (12 of Transcriptional activator Myb n=7 Tax=Hominidae TaxID=9604 RepID=P10242-12) HSP 1 Score: 150 bits (380), Expect = 3.730e-37 Identity = 76/168 (45.24%), Postives = 110/168 (65.48%), Query Frame = 1
Query: 127 RWTQEQSLRLRQLVEERQLVVGTSGAKDWTNIARKIPPKTDLQCMLHWNHVINPELTKGKGSWKQEEDERIMQLVEHHG-KKWSVIATQLKAENGKMTRVGKQIRERYLHHLDPNLKKGDWSVQEEEVLVREHGIHKNKWAQIAKSLPGRCSNDIKNHWYAHERRQRE 627
RWT+E+ +L++LVE+ +G DW IA +P +TD+QC W V+NPEL KG W +EED+R+++LV+ +G K+WSVIA LK R+GKQ RER+ +HL+P +KK W+ +E+ ++ + H N+WA+IAK LPGR N IKNHW + RR+ E
Sbjct: 42 RWTREEDEKLKKLVEQ-------NGTDDWKVIANYLPNRTDVQCQHRWQKVLNPELIKGP--WTKEEDQRVIELVQKYGPKRWSVIAKHLKG------RIGKQCRERWHNHLNPEVKKTSWTEEEDRIIYQAHKRLGNRWAEIAKLLPGRTDNAIKNHWNSTMRRKVE 194
BLAST of mRNA_E_fasciculatus_S2_contig8689.16796.1 vs.
Match: transcriptional (activator Myb isoform X3 n=2 Tax=Sphaerodactylus townsendi TaxID=933632 RepID=UPI002026C068) HSP 1 Score: 158 bits (399), Expect = 4.200e-37 Identity = 91/209 (43.54%), Postives = 128/209 (61.24%), Query Frame = 1
Query: 127 RWTQEQSLRLRQLVEERQLVVGTSGAKDWTNIARKIPPKTDLQCMLHWNHVINPELTKGKGSWKQEEDERIMQLVEHHG-KKWSVIATQLKAENGKMTRVGKQIRERYLHHLDPNLKKGDWSVQEEEVLVREHGIHKNKWAQIAKSLPGRCSNDIKNHWYAHERRQ-------REISRASTSSTAAA----------TETPPIVVQRTT 699
RWT+E+ +L+QLVE+ +G +DW IA +P +TD+QC W V+NPEL KG W +EED+R+++LV+ +G K+WSVIA LK R+GKQ RER+ +HL+P +KK W+ +E+ ++ + H N+WA+IAK LPGR N IKNHW + RR+ +E S+AS SS AA+ T TPP V TT
Sbjct: 42 RWTREEDEKLKQLVEQ-------NGTEDWKVIANFLPNRTDVQCQHRWQKVLNPELIKGP--WTKEEDQRVIELVQKYGPKRWSVIAKHLKG------RIGKQCRERWHNHLNPEVKKTSWTEEEDRIIYQAHKRLGNRWAEIAKLLPGRTDNAIKNHWNSTMRRKVEQEGYLQESSKASQSSVAASFQKSNHLMGYTPTPPSVQLPTT 235
BLAST of mRNA_E_fasciculatus_S2_contig8689.16796.1 vs.
Match: Myb-related (protein A n=2 Tax=Aphidini TaxID=33387 RepID=A0A2S2NFC6_SCHGA) HSP 1 Score: 154 bits (389), Expect = 5.650e-37 Identity = 78/169 (46.15%), Postives = 111/169 (65.68%), Query Frame = 1
Query: 127 RWTQEQSLRLRQLVEERQLVVGTSGAKDWTNIARKIPPKTDLQCMLHWNHVINPELTKGKGSWKQEEDERIMQLVEHHG-KKWSVIATQLKAENGKMTRVGKQIRERYLHHLDPNLKKGDWSVQEEEVLVREHGIHKNKWAQIAKSLPGRCSNDIKNHWYAHERRQREI 630
RWT+E+ +RL+QLVEE Q + W IA+ ++D+QC W+ V+NP+L KG W +EEDE +++LVE +G KKW++IA LK R+GKQ RER+ +HL+PN+KK W+ +E+ ++ R H N+WA+IAK LPGR N IKNHW + RR+ EI
Sbjct: 108 RWTKEEDMRLKQLVEEYQ--------ERWDLIAQHFNDRSDIQCQQRWHKVVNPDLVKGP--WTKEEDETVLELVEKYGPKKWTLIARHLKG------RIGKQCRERWHNHLNPNIKKSAWTDEEDRIIFRAHSQWGNQWAKIAKLLPGRTDNAIKNHWNSTMRRKYEI 260
BLAST of mRNA_E_fasciculatus_S2_contig8689.16796.1 vs.
Match: MYB (proto-oncogene, transcription factor n=6 Tax=Boreoeutheria TaxID=1437010 RepID=A0A2K6DQZ6_MACNE) HSP 1 Score: 150 bits (380), Expect = 5.820e-37 Identity = 76/168 (45.24%), Postives = 110/168 (65.48%), Query Frame = 1
Query: 127 RWTQEQSLRLRQLVEERQLVVGTSGAKDWTNIARKIPPKTDLQCMLHWNHVINPELTKGKGSWKQEEDERIMQLVEHHG-KKWSVIATQLKAENGKMTRVGKQIRERYLHHLDPNLKKGDWSVQEEEVLVREHGIHKNKWAQIAKSLPGRCSNDIKNHWYAHERRQRE 627
RWT+E+ +L++LVE+ +G DW IA +P +TD+QC W V+NPEL KG W +EED+R+++LV+ +G K+WSVIA LK R+GKQ RER+ +HL+P +KK W+ +E+ ++ + H N+WA+IAK LPGR N IKNHW + RR+ E
Sbjct: 42 RWTREEDEKLKKLVEQ-------NGTDDWKVIANYLPNRTDVQCQHRWQKVLNPELIKGP--WTKEEDQRVIELVQKYGPKRWSVIAKHLKG------RIGKQCRERWHNHLNPEVKKTSWTEEEDRIIYQAHKRLGNRWAEIAKLLPGRTDNAIKNHWNSTMRRKVE 194
BLAST of mRNA_E_fasciculatus_S2_contig8689.16796.1 vs.
Match: MYB (proto-oncogene, transcription factor n=8 Tax=Catarrhini TaxID=9526 RepID=A0A2K5ZVK3_MANLE) HSP 1 Score: 150 bits (380), Expect = 5.950e-37 Identity = 76/168 (45.24%), Postives = 110/168 (65.48%), Query Frame = 1
Query: 127 RWTQEQSLRLRQLVEERQLVVGTSGAKDWTNIARKIPPKTDLQCMLHWNHVINPELTKGKGSWKQEEDERIMQLVEHHG-KKWSVIATQLKAENGKMTRVGKQIRERYLHHLDPNLKKGDWSVQEEEVLVREHGIHKNKWAQIAKSLPGRCSNDIKNHWYAHERRQRE 627
RWT+E+ +L++LVE+ +G DW IA +P +TD+QC W V+NPEL KG W +EED+R+++LV+ +G K+WSVIA LK R+GKQ RER+ +HL+P +KK W+ +E+ ++ + H N+WA+IAK LPGR N IKNHW + RR+ E
Sbjct: 43 RWTREEDEKLKKLVEQ-------NGTDDWKVIANYLPNRTDVQCQHRWQKVLNPELIKGP--WTKEEDQRVIELVQKYGPKRWSVIAKHLKG------RIGKQCRERWHNHLNPEVKKTSWTEEEDRIIYQAHKRLGNRWAEIAKLLPGRTDNAIKNHWNSTMRRKVE 195 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig8689.16796.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig8689.16796.1 >prot_E_fasciculatus_S2_contig8689.16796.1 ID=prot_E_fasciculatus_S2_contig8689.16796.1|Name=mRNA_E_fasciculatus_S2_contig8689.16796.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=623bp QQLQQQQQQQQQQQQESTTTPASAPTPAPVSAPAAMPPVVYHRWTQEQSLback to top mRNA from alignment at E_fasciculatus_S2_contig8689:553..4609- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig8689.16796.1 ID=mRNA_E_fasciculatus_S2_contig8689.16796.1|Name=mRNA_E_fasciculatus_S2_contig8689.16796.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=4057bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig8689:553..4609- (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig8689:553..4609- >mRNA_E_fasciculatus_S2_contig8689.16796.1 ID=mRNA_E_fasciculatus_S2_contig8689.16796.1|Name=mRNA_E_fasciculatus_S2_contig8689.16796.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=1869bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig8689:553..4609- (Ectocarpus fasciculatus EfasUO2)back to top |