mRNA_E_fasciculatus_S2_contig8677.16788.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig8677.16788.1 vs.
Match: DLH (domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FRF8_ECTSI) HSP 1 Score: 489 bits (1258), Expect = 1.740e-172 Identity = 233/245 (95.10%), Postives = 238/245 (97.14%), Query Frame = 1
Query: 106 MASAACCAAGPPVACDYTPKGTISKIGDVDTYFVGSGPKAIVVVYDIFGFSPQLKQVCDMFAAAGFNVAMPDFCKGNHWLLENFPPKDKSELGAWFGTTGKWETSILPTFIPAVAHMKEHRGAEVVGVTGFCWGGMIAMKAASLDADAEGAVKAGGNVHPAMLSAELAQDVKVPVLIMPSGEDPDHLPLKEVLDKKPFGDKCQYRRFDDMHHGFCAARGDWADAVQATRAAEAIDTFVKFYSANL 840
MASAACCAAGPPVACDYTPKGTISKIGDVDTYFVGSGPKA+VVVYDIFGFSPQLKQVCDMFAAAGFNVAMPDFCKGN W LENFPPKD+SELGAWFGTTGKWETSI PTFIPAVAHMKEHRGAEVVGVTGFCWGGMIAMKAASLD DAEG VKAGG VHPAMLSAELAQDVKVPVLIMPSGEDPDHLP+KEVLDKKPFGDKCQYRRFDDMHHGFCAARGDWA+AVQATRAAEAID FVKFY+ANL
Sbjct: 1 MASAACCAAGPPVACDYTPKGTISKIGDVDTYFVGSGPKALVVVYDIFGFSPQLKQVCDMFAAAGFNVAMPDFCKGNPWPLENFPPKDRSELGAWFGTTGKWETSIRPTFIPAVAHMKEHRGAEVVGVTGFCWGGMIAMKAASLDPDAEGGVKAGGTVHPAMLSAELAQDVKVPVLIMPSGEDPDHLPVKEVLDKKPFGDKCQYRRFDDMHHGFCAARGDWANAVQATRAAEAIDAFVKFYTANL 245
BLAST of mRNA_E_fasciculatus_S2_contig8677.16788.1 vs.
Match: Alpha/Beta (hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8A5_9STRA) HSP 1 Score: 291 bits (744), Expect = 1.860e-94 Identity = 144/245 (58.78%), Postives = 170/245 (69.39%), Query Frame = 1
Query: 106 MASAACCAAGPPVACDYTPKGTISKIGDVDTYFVGSGPKAIVVVYDIFGFSPQLKQVCDMFAAAGFNVAMPDFCKGNHWLLENFPPKDKSELGAWFGTTGKWETSILPTFIPAVAHMKEHRGAEVVGVTGFCWGGMIAMKAASLDADAEGAVKAGGNVHPAMLSAELAQDVKVPVLIMPSGEDPDHLPLKEVLDKKPFGDKCQYRRFDDMHHGFCAARGDWADAVQATRAAEAIDTFVKFYSANL 840
MAS ACC AGPP++ DY PKGTI+ IGD + YF GSGP+AI +VYDIFG SPQ KQVCD A AGF+VAMPDF +G WLLENFPPKD+ E AW G ++ I P AHM+E GA+V G GFCWGG IA KAA A+G V AG VH A ++ EL + V VP+ ++PSG+DPD PLKEVLDKKPFG C Y RF+DMHHGFCAARGDW+ + A RA+EA+ F NL
Sbjct: 1 MASPACCKAGPPISSDYEPKGTIATIGDQEVYFSGSGPRAICIVYDIFGLSPQAKQVCDKLADAGFSVAMPDFARGQPWLLENFPPKDQGEFMAWVGKHD-FDAVIRPDMERVQAHMRETMGAKVFGAIGFCWGGSIATKAAC----AQGLVAAGAAVHYAFITPELVEGVCVPLCLLPSGDDPDTAPLKEVLDKKPFGAACVYHRFEDMHHGFCAARGDWSQPLIAQRASEAVAMLSDFMDKNL 240
BLAST of mRNA_E_fasciculatus_S2_contig8677.16788.1 vs.
Match: DLH (domain-containing protein n=1 Tax=Chlamydomonas schloesseri TaxID=2026947 RepID=A0A836BBU2_9CHLO) HSP 1 Score: 194 bits (493), Expect = 1.190e-56 Identity = 107/241 (44.40%), Postives = 134/241 (55.60%), Query Frame = 1
Query: 112 SAACCAAGPPVACDYTPKGTISKIGDVDTYFVGSGPKAIVVVYDIFGFS-PQLKQVCDMFAAAGFNVAMPDFCKGNHWLLENFPPKDKSELGAWFGTTGKWETSILPTFIPAVAHMKEHRGAEVVGVTGFCWGGMIAMKAASLDADAEGAVKAGGNVHPAMLS--AELAQDVKVPVLIMPSGEDPDHLPLKEVLDKKPFGDKCQYRRFDDMHHGFCAARGDWADAVQATRAAEAIDTFVKF 825
S AC AAG PV Y PKGT +K G D Y G+G +V+V DIFGF Q+ QV D FA AGFNV D G W ++ FPPK + + W G G W+ + P AVA +KE GA G GFCWG IAM+A E G HPA+ A A+ V+ PV+++P+ D D P+K VLD++P+G KC Y+RFDD HGF AARGDW+ A A +AI F
Sbjct: 4 SEACTAAGAPVVSSYEPKGTFTKAGSTDVYRSGAGALGLVIVPDIFGFGHKQVFQVADRFAEAGFNVCAIDPFHGKPWTMDKFPPKPEHDFMGWIGREGSWQ-KLQPQVAAAVAKLKE-AGATKFGCIGFCWGVSIAMQAGQ-----EATFSGVGGAHPALFGKDAAFAEKVQCPVVLLPAQGDADTAPVKAVLDRRPYGSKCVYQRFDDQTHGFVAARGDWSKPEVAAAAGKAIGIMADF 237
BLAST of mRNA_E_fasciculatus_S2_contig8677.16788.1 vs.
Match: DLH (domain-containing protein n=2 Tax=Spizellomyces TaxID=4815 RepID=A0A0L0HMK7_SPIPD) HSP 1 Score: 195 bits (495), Expect = 1.230e-56 Identity = 113/254 (44.49%), Postives = 151/254 (59.45%), Query Frame = 1
Query: 103 NMA---SAACCAAGPPVACDYTPKGTISKIGDVDTYFVGS-GPKAIVVVYDIFGFSPQLKQVCDMFAAAGFNVAMPDFCKGNHWLLENFPPKDKSELGAWFGTTGKWETSILPTFIPAVAHMKEHRGAEVVGVTGFCWGGMIAMKAASLDADAEGAVKAGGNVHPAMLSAELAQDVKVPVLIMPSGEDPDHLPLKEVLDKKPFGDKCQYRRFDDMHHGFCAARGDWADAVQATRAAEAIDTFVKFYSANL*AVL 852
NMA S ACC PP A +Y PKG +S +GD+ TYFVG G +AI+++YDIFGF P Q D AA GF VA PDF +GN W LE P + EL A E+ +L I +V GAE +G GFCWG + A++A + EG V A HP+ L+ E+ +DVK P+ ++PS ++PD +PL E L +KPF DK + RFDDMHHG+CAAR D+++ A R+ EA+ +F+ L A L
Sbjct: 23 NMAGEHSKACCEL-PPFASNYQPKGQVSTVGDLPTYFVGEKGKRAIILIYDIFGFHPNTHQFADELAAKGFFVAEPDFYRGNPWPLEKVPIQ-LPELMAHLEQHVP-ESRMLAD-IGSVCRYLRSNGAESIGTLGFCWGAIYAIRA-----NVEGLVDASAAAHPSRLTVEIVKDVKGPLALLPSKDEPDLIPLMEALKEKPFVDKNVHVRFDDMHHGWCAARSDYSNPANARRSREALQIMARFFDETLQAKL 267
BLAST of mRNA_E_fasciculatus_S2_contig8677.16788.1 vs.
Match: Alpha/beta-hydrolase (n=1 Tax=Basidiobolus meristosporus CBS 931.73 TaxID=1314790 RepID=A0A1Y1Y5T6_9FUNG) HSP 1 Score: 193 bits (490), Expect = 3.130e-56 Identity = 103/250 (41.20%), Postives = 140/250 (56.00%), Query Frame = 1
Query: 109 ASAACCAAGPPVACDYTPKGTISKIGDVDTYFVG--SGPKAIVVVYDIFGFSPQLKQVCDMFAAA-GFNVAMPDFCKGNHWLLENFPPKDKSELGAWFGTTGKWETSILPTFIPAVAHMKEH---RGAEVVGVTGFCWGGMIAMKAASLDADAEGAVKAGGNVHPAMLSAELAQDVKVPVLIMPSGEDPDHLPLKEVLDKKPFGDKCQYRRFDDMHHGFCAARGDWADAVQATRAAEAIDTFVKFYSANL 840
A+ ACC+ PPV DY PKG+I KI D+ YFVG KA+VV+YDIFGF P KQ CD+ F VA+PDF +G W P+D+ L W + G W+ + P + +K+H G+ GV GFCWG + + A +G+ A +HP++L+ E A+ + P+L++PS ++PD E+L KK FG KC Y FDDMHHGF AARGD+ D R EAI F+ N+
Sbjct: 3 ANKACCSL-PPVVSDYQPKGSIEKIDDLSVYFVGPKDAKKAVVVIYDIFGFHPNTKQFCDILGEKFNFRVALPDFFRGKPWDHTRMTPEDRPALMQWITSVGSWDNTK-----PDLEKVKKHLSSSGSTDFGVVGFCWGAKMGVLATR-----DGSFSAASLIHPSLLADEDAELAEAPILLIPSKDEPDLTKFVEILKKKSFGSKCSYHLFDDMHHGFAAARGDYNDPANVKRTTEAIQLTGDFFQNNV 241
BLAST of mRNA_E_fasciculatus_S2_contig8677.16788.1 vs.
Match: DLH (domain-containing protein n=2 Tax=Chlamydomonas reinhardtii TaxID=3055 RepID=A0A2K3CV50_CHLRE) HSP 1 Score: 191 bits (484), Expect = 2.870e-55 Identity = 108/242 (44.63%), Postives = 136/242 (56.20%), Query Frame = 1
Query: 112 SAACCAAGPPVACDYTPKGTISKIGDVDTYFVGSGPKAIVVVYDIFGFS-PQLKQVCDMFAAAGFNVAMPDFCKGNHWLLENFPPKDKSELGAWFGTTGKWETSILPTFIPAVAHMKEHRGAEVVGVTGFCWGGMIAMKAASLDADAEGAVKAG-GNVHPAMLS--AELAQDVKVPVLIMPSGEDPDHLPLKEVLDKKPFGDKCQYRRFDDMHHGFCAARGDWADAVQATRAAEAIDTFVKF 825
S AC AAG PV DY PKGT +K G D Y GSG +V+V DIFGF Q+ QV D FA AGFNV D G W + FPPK + + W W+ + P AVA +KE GA G GFCWG IAM+A +G +G G HPA+ A+ A+ V+ PV+++P+ D D P+++VLDK+P+G KC Y+RFDD HGF AARGDW A A +AI F
Sbjct: 4 SEACTAAGAPVVSDYEPKGTFTKAGSTDVYHSGSGALGVVIVPDIFGFGHKQVFQVADRFADAGFNVCAIDPFHGKPWTKDRFPPKPEHDFMGWLSREASWD-KLKPQIDAAVAKLKEG-GASKFGCIGFCWGVSIAMQAGQ-----DGHTFSGVGGAHPALFGHDADFAEKVQCPVVLLPAQGDADTGPVQKVLDKRPYGSKCVYQRFDDQTHGFVAARGDWTKPEVAAAAGKAIGIMTDF 238
BLAST of mRNA_E_fasciculatus_S2_contig8677.16788.1 vs.
Match: DLH (domain-containing protein n=1 Tax=Chlamydomonas incerta TaxID=51695 RepID=A0A835W382_CHLIN) HSP 1 Score: 189 bits (480), Expect = 1.130e-54 Identity = 108/241 (44.81%), Postives = 134/241 (55.60%), Query Frame = 1
Query: 112 SAACCAAGPPVACDYTPKGTISKIGDVDTYFVGSGPKAIVVVYDIFGFS-PQLKQVCDMFAAAGFNVAMPDFCKGNHWLLENFPPKDKSELGAWFGTTGKWETSILPTFIPAVAHMKEHRGAEVVGVTGFCWGGMIAMKAASLDADAEGAVKAGGNVHPAMLSAEL--AQDVKVPVLIMPSGEDPDHLPLKEVLDKKPFGDKCQYRRFDDMHHGFCAARGDWADAVQATRAAEAIDTFVKF 825
S AC AAG PV +Y PKGT K G D Y GSG +V++ DIFGF Q+ QV D FA AGFNV D G W ++ FPPK + + W G W+ + P AVA +K GA G GFCWG IAM AA D V G HPA+ +L A+ V+ PV+++P+ D D P+K+VLDK+P+G KC Y+RFDD HGF AARGDW+ A A AI F
Sbjct: 4 SEACTAAGAPVVSNYEPKGTFEKAGSADVYRSGSGALGVVIIPDIFGFGHKQVFQVADRFAEAGFNVCAIDPFHGKPWTMDRFPPKPEHDFKGWLGREAGWD-KLKPQVDAAVAKLKA-AGATKFGCIGFCWGVSIAM-AAGQDGHTFSGV---GGAHPALFGHDLDYAEKVQCPVVLLPAQGDADTAPVKKVLDKRPYGTKCVYQRFDDQTHGFVAARGDWSKPEVAAAAGRAIGLMADF 238
BLAST of mRNA_E_fasciculatus_S2_contig8677.16788.1 vs.
Match: DLH (domain-containing protein n=1 Tax=Chlamydomonas schloesseri TaxID=2026947 RepID=A0A836BBS3_9CHLO) HSP 1 Score: 186 bits (472), Expect = 7.160e-53 Identity = 102/241 (42.32%), Postives = 134/241 (55.60%), Query Frame = 1
Query: 112 SAACCAAGPPVACDYTPKGTISKIGDVDTYFVGSGPKAIVVVYDIFGFS-PQLKQVCDMFAAAGFNVAMPDFCKGNHWLLENFPPKDKSELGAWFGTTGKWETSILPTFIPAVAHMKEHRGAEVVGVTGFCWGGMIAMKAASLDADAEGAVKAGGNVHPAMLSAEL--AQDVKVPVLIMPSGEDPDHLPLKEVLDKKPFGDKCQYRRFDDMHHGFCAARGDWADAVQATRAAEAIDTFVKF 825
S AC AAG PV Y PKGT + G D Y +G+G +V+V DIFGF Q+ QV D FA AGFNV + D GN W ++ FPPK + + W W + P AVA +KE GA G GFCWG IAM+A E G HP++ +L A+ V+ PV+++P+ D D P+K++LD++ +G KC Y+RFDD HGF AARGDW+ A A +AI F
Sbjct: 4 SEACTAAGAPVVSTYEPKGTFERAGSTDVYLIGAGALGVVLVPDIFGFGHKQVFQVADRFAEAGFNVCVMDPFHGNPWTMDKFPPKPEHDFKGWLAREAGWGR-MRPHVHDAVAKLKE-AGATKFGCIGFCWGVSIAMQAGQ-----EATFSGVGGPHPSLFGHDLDFAEKVQCPVVLLPAEGDADTAPIKKILDRRAYGSKCVYQRFDDQTHGFVAARGDWSKPEVAAAAGKAIGIMADF 237
BLAST of mRNA_E_fasciculatus_S2_contig8677.16788.1 vs.
Match: Alpha/Beta (hydrolase protein n=1 Tax=Syncephalastrum racemosum TaxID=13706 RepID=A0A1X2HGG9_SYNRA) HSP 1 Score: 183 bits (465), Expect = 1.900e-52 Identity = 98/246 (39.84%), Postives = 131/246 (53.25%), Query Frame = 1
Query: 112 SAACCAAGPPVACDYTPKGTISKIGDVDTYFVG--SGPKAIVVVYDIFGFSPQLKQVCDMFA-AAGFNVAMPDFCKGNHWLLENFPPKDKSELGAWFGTTGKWETSILPTFIPAVAHMKEHRGAEVVGVTGFCWGGMIAMKAASLDADAEGAVKAGGNVHPAMLSAELAQDVKVPVLIMPSGEDPDHLPLKEVLDKKPFGDKCQYRRFDDMHHGFCAARGDWADAVQATRAAEAIDTFVKFYSANL 840
S ACC P Y P G I +GD+ Y VG K++ V+YDIFGF KQ CD+ A G+ V MPDF +G W P D L W G G + +LP + AV + +G G+ GFCWG IA++A + D+ A +HP+ + + A++ P+L +PS ++PD VL KKPFG+ C++ RFDDMHHGF AARGDW D V RA EA+ F+ A L
Sbjct: 4 SKACCTIPPVEGSTYEPTGVIENVGDLPVYVVGPKDAKKSVFVIYDIFGFHVNTKQFCDVLANRCGYRVVMPDFFRGEPWSPAKMTPADMPSLMEWVGKVGTIDV-VLPQ-LQAVRDWIKPQGVNQAGIVGFCWGAKIAVQATAKDSFFGSA----SLIHPSFVDTKDAEEAGAPILAIPSKDEPDMTEYMAVLAKKPFGNLCEHHRFDDMHHGFAAARGDWNDEVNKKRATEAVQLTANFFKATL 243
BLAST of mRNA_E_fasciculatus_S2_contig8677.16788.1 vs.
Match: DLH (domain-containing protein n=1 Tax=Bifiguratus adelaidae TaxID=1938954 RepID=A0A261XW89_9FUNG) HSP 1 Score: 181 bits (458), Expect = 1.920e-51 Identity = 100/250 (40.00%), Postives = 141/250 (56.40%), Query Frame = 1
Query: 100 ENMASAACCAAGPPVACDYTPKGTISKIGDVDTYFVGS--GPKAIVVVYDIFGFSPQLKQVCDMFAAAG-FNVAMPDFCKGNHWLLENFPPKDKSELGAWFGTTGKWETSILPTFIPAVAHMKEHRGAEVVGVTGFCWGGMIAMKAASLDADAEGAVKAGGNVHPAMLSAELAQDVKVPVLIMPSGEDPDHLPLKEVLDKKPFGDKCQYRRFDDMHHGFCAARGDWADAVQATRAAEAIDTFVKFYSANL 840
++ + ACC+ PPV +Y GT+ ++GD+D Y VGS +AI+V+YD++GF KQ CD A AG VAMPDF +G WL N ++ L W G E +P + AV M + +G +G+ GFCWG IA++A D A +HP+ +S + A+ + PV+++ + ++PD E L KPFG KC + RF+DMHHGF AARGDW + Q RA EAI V F+ NL
Sbjct: 2 QHSSEQACCSI-PPVDSNYKAVGTVKRLGDMDVYMVGSTTSNRAIIVLYDVYGFHKNTKQFCDRLAEAGNVQVAMPDFFRGKPWLASN--AGNREALVKWVTQVGTRE-KCMPD-LNAVKSMLQKQGVNQIGLVGFCWGAKIAVQATGESKD----YAAAALIHPSFISIDDAKSAQAPVMVLATKDEPDMTEYMEQLYAKPFGSKCTFTRFEDMHHGFAAARGDWENKEQNKRATEAIRLTVDFFRNNL 242 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig8677.16788.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig8677.16788.1 >prot_E_fasciculatus_S2_contig8677.16788.1 ID=prot_E_fasciculatus_S2_contig8677.16788.1|Name=mRNA_E_fasciculatus_S2_contig8677.16788.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=246bp MASAACCAAGPPVACDYTPKGTISKIGDVDTYFVGSGPKAIVVVYDIFGFback to top mRNA from alignment at E_fasciculatus_S2_contig8677:2..5184- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig8677.16788.1 ID=mRNA_E_fasciculatus_S2_contig8677.16788.1|Name=mRNA_E_fasciculatus_S2_contig8677.16788.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=5183bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig8677:2..5184- (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig8677:2..5184- >mRNA_E_fasciculatus_S2_contig8677.16788.1 ID=mRNA_E_fasciculatus_S2_contig8677.16788.1|Name=mRNA_E_fasciculatus_S2_contig8677.16788.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=738bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig8677:2..5184- (Ectocarpus fasciculatus EfasUO2)back to top |