mRNA_E_fasciculatus_S2_contig8677.16788.1 (mRNA) Ectocarpus fasciculatus EfasUO2

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E_fasciculatus_S2_contig8677.16788.1
Unique NamemRNA_E_fasciculatus_S2_contig8677.16788.1
TypemRNA
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Homology
BLAST of mRNA_E_fasciculatus_S2_contig8677.16788.1 vs.
Match: DLH (domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FRF8_ECTSI)

HSP 1 Score: 489 bits (1258), Expect = 1.740e-172
Identity = 233/245 (95.10%), Postives = 238/245 (97.14%), Query Frame = 1
Query:  106 MASAACCAAGPPVACDYTPKGTISKIGDVDTYFVGSGPKAIVVVYDIFGFSPQLKQVCDMFAAAGFNVAMPDFCKGNHWLLENFPPKDKSELGAWFGTTGKWETSILPTFIPAVAHMKEHRGAEVVGVTGFCWGGMIAMKAASLDADAEGAVKAGGNVHPAMLSAELAQDVKVPVLIMPSGEDPDHLPLKEVLDKKPFGDKCQYRRFDDMHHGFCAARGDWADAVQATRAAEAIDTFVKFYSANL 840
            MASAACCAAGPPVACDYTPKGTISKIGDVDTYFVGSGPKA+VVVYDIFGFSPQLKQVCDMFAAAGFNVAMPDFCKGN W LENFPPKD+SELGAWFGTTGKWETSI PTFIPAVAHMKEHRGAEVVGVTGFCWGGMIAMKAASLD DAEG VKAGG VHPAMLSAELAQDVKVPVLIMPSGEDPDHLP+KEVLDKKPFGDKCQYRRFDDMHHGFCAARGDWA+AVQATRAAEAID FVKFY+ANL
Sbjct:    1 MASAACCAAGPPVACDYTPKGTISKIGDVDTYFVGSGPKALVVVYDIFGFSPQLKQVCDMFAAAGFNVAMPDFCKGNPWPLENFPPKDRSELGAWFGTTGKWETSIRPTFIPAVAHMKEHRGAEVVGVTGFCWGGMIAMKAASLDPDAEGGVKAGGTVHPAMLSAELAQDVKVPVLIMPSGEDPDHLPVKEVLDKKPFGDKCQYRRFDDMHHGFCAARGDWANAVQATRAAEAIDAFVKFYTANL 245          
BLAST of mRNA_E_fasciculatus_S2_contig8677.16788.1 vs.
Match: Alpha/Beta (hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8A5_9STRA)

HSP 1 Score: 291 bits (744), Expect = 1.860e-94
Identity = 144/245 (58.78%), Postives = 170/245 (69.39%), Query Frame = 1
Query:  106 MASAACCAAGPPVACDYTPKGTISKIGDVDTYFVGSGPKAIVVVYDIFGFSPQLKQVCDMFAAAGFNVAMPDFCKGNHWLLENFPPKDKSELGAWFGTTGKWETSILPTFIPAVAHMKEHRGAEVVGVTGFCWGGMIAMKAASLDADAEGAVKAGGNVHPAMLSAELAQDVKVPVLIMPSGEDPDHLPLKEVLDKKPFGDKCQYRRFDDMHHGFCAARGDWADAVQATRAAEAIDTFVKFYSANL 840
            MAS ACC AGPP++ DY PKGTI+ IGD + YF GSGP+AI +VYDIFG SPQ KQVCD  A AGF+VAMPDF +G  WLLENFPPKD+ E  AW G    ++  I P      AHM+E  GA+V G  GFCWGG IA KAA     A+G V AG  VH A ++ EL + V VP+ ++PSG+DPD  PLKEVLDKKPFG  C Y RF+DMHHGFCAARGDW+  + A RA+EA+     F   NL
Sbjct:    1 MASPACCKAGPPISSDYEPKGTIATIGDQEVYFSGSGPRAICIVYDIFGLSPQAKQVCDKLADAGFSVAMPDFARGQPWLLENFPPKDQGEFMAWVGKHD-FDAVIRPDMERVQAHMRETMGAKVFGAIGFCWGGSIATKAAC----AQGLVAAGAAVHYAFITPELVEGVCVPLCLLPSGDDPDTAPLKEVLDKKPFGAACVYHRFEDMHHGFCAARGDWSQPLIAQRASEAVAMLSDFMDKNL 240          
BLAST of mRNA_E_fasciculatus_S2_contig8677.16788.1 vs.
Match: DLH (domain-containing protein n=1 Tax=Chlamydomonas schloesseri TaxID=2026947 RepID=A0A836BBU2_9CHLO)

HSP 1 Score: 194 bits (493), Expect = 1.190e-56
Identity = 107/241 (44.40%), Postives = 134/241 (55.60%), Query Frame = 1
Query:  112 SAACCAAGPPVACDYTPKGTISKIGDVDTYFVGSGPKAIVVVYDIFGFS-PQLKQVCDMFAAAGFNVAMPDFCKGNHWLLENFPPKDKSELGAWFGTTGKWETSILPTFIPAVAHMKEHRGAEVVGVTGFCWGGMIAMKAASLDADAEGAVKAGGNVHPAMLS--AELAQDVKVPVLIMPSGEDPDHLPLKEVLDKKPFGDKCQYRRFDDMHHGFCAARGDWADAVQATRAAEAIDTFVKF 825
            S AC AAG PV   Y PKGT +K G  D Y  G+G   +V+V DIFGF   Q+ QV D FA AGFNV   D   G  W ++ FPPK + +   W G  G W+  + P    AVA +KE  GA   G  GFCWG  IAM+A       E      G  HPA+    A  A+ V+ PV+++P+  D D  P+K VLD++P+G KC Y+RFDD  HGF AARGDW+    A  A +AI     F
Sbjct:    4 SEACTAAGAPVVSSYEPKGTFTKAGSTDVYRSGAGALGLVIVPDIFGFGHKQVFQVADRFAEAGFNVCAIDPFHGKPWTMDKFPPKPEHDFMGWIGREGSWQ-KLQPQVAAAVAKLKE-AGATKFGCIGFCWGVSIAMQAGQ-----EATFSGVGGAHPALFGKDAAFAEKVQCPVVLLPAQGDADTAPVKAVLDRRPYGSKCVYQRFDDQTHGFVAARGDWSKPEVAAAAGKAIGIMADF 237          
BLAST of mRNA_E_fasciculatus_S2_contig8677.16788.1 vs.
Match: DLH (domain-containing protein n=2 Tax=Spizellomyces TaxID=4815 RepID=A0A0L0HMK7_SPIPD)

HSP 1 Score: 195 bits (495), Expect = 1.230e-56
Identity = 113/254 (44.49%), Postives = 151/254 (59.45%), Query Frame = 1
Query:  103 NMA---SAACCAAGPPVACDYTPKGTISKIGDVDTYFVGS-GPKAIVVVYDIFGFSPQLKQVCDMFAAAGFNVAMPDFCKGNHWLLENFPPKDKSELGAWFGTTGKWETSILPTFIPAVAHMKEHRGAEVVGVTGFCWGGMIAMKAASLDADAEGAVKAGGNVHPAMLSAELAQDVKVPVLIMPSGEDPDHLPLKEVLDKKPFGDKCQYRRFDDMHHGFCAARGDWADAVQATRAAEAIDTFVKFYSANL*AVL 852
            NMA   S ACC   PP A +Y PKG +S +GD+ TYFVG  G +AI+++YDIFGF P   Q  D  AA GF VA PDF +GN W LE  P +   EL A        E+ +L   I +V       GAE +G  GFCWG + A++A     + EG V A    HP+ L+ E+ +DVK P+ ++PS ++PD +PL E L +KPF DK  + RFDDMHHG+CAAR D+++   A R+ EA+    +F+   L A L
Sbjct:   23 NMAGEHSKACCEL-PPFASNYQPKGQVSTVGDLPTYFVGEKGKRAIILIYDIFGFHPNTHQFADELAAKGFFVAEPDFYRGNPWPLEKVPIQ-LPELMAHLEQHVP-ESRMLAD-IGSVCRYLRSNGAESIGTLGFCWGAIYAIRA-----NVEGLVDASAAAHPSRLTVEIVKDVKGPLALLPSKDEPDLIPLMEALKEKPFVDKNVHVRFDDMHHGWCAARSDYSNPANARRSREALQIMARFFDETLQAKL 267          
BLAST of mRNA_E_fasciculatus_S2_contig8677.16788.1 vs.
Match: Alpha/beta-hydrolase (n=1 Tax=Basidiobolus meristosporus CBS 931.73 TaxID=1314790 RepID=A0A1Y1Y5T6_9FUNG)

HSP 1 Score: 193 bits (490), Expect = 3.130e-56
Identity = 103/250 (41.20%), Postives = 140/250 (56.00%), Query Frame = 1
Query:  109 ASAACCAAGPPVACDYTPKGTISKIGDVDTYFVG--SGPKAIVVVYDIFGFSPQLKQVCDMFAAA-GFNVAMPDFCKGNHWLLENFPPKDKSELGAWFGTTGKWETSILPTFIPAVAHMKEH---RGAEVVGVTGFCWGGMIAMKAASLDADAEGAVKAGGNVHPAMLSAELAQDVKVPVLIMPSGEDPDHLPLKEVLDKKPFGDKCQYRRFDDMHHGFCAARGDWADAVQATRAAEAIDTFVKFYSANL 840
            A+ ACC+  PPV  DY PKG+I KI D+  YFVG     KA+VV+YDIFGF P  KQ CD+      F VA+PDF +G  W      P+D+  L  W  + G W+ +      P +  +K+H    G+   GV GFCWG  + + A       +G+  A   +HP++L+ E A+  + P+L++PS ++PD     E+L KK FG KC Y  FDDMHHGF AARGD+ D     R  EAI     F+  N+
Sbjct:    3 ANKACCSL-PPVVSDYQPKGSIEKIDDLSVYFVGPKDAKKAVVVIYDIFGFHPNTKQFCDILGEKFNFRVALPDFFRGKPWDHTRMTPEDRPALMQWITSVGSWDNTK-----PDLEKVKKHLSSSGSTDFGVVGFCWGAKMGVLATR-----DGSFSAASLIHPSLLADEDAELAEAPILLIPSKDEPDLTKFVEILKKKSFGSKCSYHLFDDMHHGFAAARGDYNDPANVKRTTEAIQLTGDFFQNNV 241          
BLAST of mRNA_E_fasciculatus_S2_contig8677.16788.1 vs.
Match: DLH (domain-containing protein n=2 Tax=Chlamydomonas reinhardtii TaxID=3055 RepID=A0A2K3CV50_CHLRE)

HSP 1 Score: 191 bits (484), Expect = 2.870e-55
Identity = 108/242 (44.63%), Postives = 136/242 (56.20%), Query Frame = 1
Query:  112 SAACCAAGPPVACDYTPKGTISKIGDVDTYFVGSGPKAIVVVYDIFGFS-PQLKQVCDMFAAAGFNVAMPDFCKGNHWLLENFPPKDKSELGAWFGTTGKWETSILPTFIPAVAHMKEHRGAEVVGVTGFCWGGMIAMKAASLDADAEGAVKAG-GNVHPAMLS--AELAQDVKVPVLIMPSGEDPDHLPLKEVLDKKPFGDKCQYRRFDDMHHGFCAARGDWADAVQATRAAEAIDTFVKF 825
            S AC AAG PV  DY PKGT +K G  D Y  GSG   +V+V DIFGF   Q+ QV D FA AGFNV   D   G  W  + FPPK + +   W      W+  + P    AVA +KE  GA   G  GFCWG  IAM+A       +G   +G G  HPA+    A+ A+ V+ PV+++P+  D D  P+++VLDK+P+G KC Y+RFDD  HGF AARGDW     A  A +AI     F
Sbjct:    4 SEACTAAGAPVVSDYEPKGTFTKAGSTDVYHSGSGALGVVIVPDIFGFGHKQVFQVADRFADAGFNVCAIDPFHGKPWTKDRFPPKPEHDFMGWLSREASWD-KLKPQIDAAVAKLKEG-GASKFGCIGFCWGVSIAMQAGQ-----DGHTFSGVGGAHPALFGHDADFAEKVQCPVVLLPAQGDADTGPVQKVLDKRPYGSKCVYQRFDDQTHGFVAARGDWTKPEVAAAAGKAIGIMTDF 238          
BLAST of mRNA_E_fasciculatus_S2_contig8677.16788.1 vs.
Match: DLH (domain-containing protein n=1 Tax=Chlamydomonas incerta TaxID=51695 RepID=A0A835W382_CHLIN)

HSP 1 Score: 189 bits (480), Expect = 1.130e-54
Identity = 108/241 (44.81%), Postives = 134/241 (55.60%), Query Frame = 1
Query:  112 SAACCAAGPPVACDYTPKGTISKIGDVDTYFVGSGPKAIVVVYDIFGFS-PQLKQVCDMFAAAGFNVAMPDFCKGNHWLLENFPPKDKSELGAWFGTTGKWETSILPTFIPAVAHMKEHRGAEVVGVTGFCWGGMIAMKAASLDADAEGAVKAGGNVHPAMLSAEL--AQDVKVPVLIMPSGEDPDHLPLKEVLDKKPFGDKCQYRRFDDMHHGFCAARGDWADAVQATRAAEAIDTFVKF 825
            S AC AAG PV  +Y PKGT  K G  D Y  GSG   +V++ DIFGF   Q+ QV D FA AGFNV   D   G  W ++ FPPK + +   W G    W+  + P    AVA +K   GA   G  GFCWG  IAM AA  D      V   G  HPA+   +L  A+ V+ PV+++P+  D D  P+K+VLDK+P+G KC Y+RFDD  HGF AARGDW+    A  A  AI     F
Sbjct:    4 SEACTAAGAPVVSNYEPKGTFEKAGSADVYRSGSGALGVVIIPDIFGFGHKQVFQVADRFAEAGFNVCAIDPFHGKPWTMDRFPPKPEHDFKGWLGREAGWD-KLKPQVDAAVAKLKA-AGATKFGCIGFCWGVSIAM-AAGQDGHTFSGV---GGAHPALFGHDLDYAEKVQCPVVLLPAQGDADTAPVKKVLDKRPYGTKCVYQRFDDQTHGFVAARGDWSKPEVAAAAGRAIGLMADF 238          
BLAST of mRNA_E_fasciculatus_S2_contig8677.16788.1 vs.
Match: DLH (domain-containing protein n=1 Tax=Chlamydomonas schloesseri TaxID=2026947 RepID=A0A836BBS3_9CHLO)

HSP 1 Score: 186 bits (472), Expect = 7.160e-53
Identity = 102/241 (42.32%), Postives = 134/241 (55.60%), Query Frame = 1
Query:  112 SAACCAAGPPVACDYTPKGTISKIGDVDTYFVGSGPKAIVVVYDIFGFS-PQLKQVCDMFAAAGFNVAMPDFCKGNHWLLENFPPKDKSELGAWFGTTGKWETSILPTFIPAVAHMKEHRGAEVVGVTGFCWGGMIAMKAASLDADAEGAVKAGGNVHPAMLSAEL--AQDVKVPVLIMPSGEDPDHLPLKEVLDKKPFGDKCQYRRFDDMHHGFCAARGDWADAVQATRAAEAIDTFVKF 825
            S AC AAG PV   Y PKGT  + G  D Y +G+G   +V+V DIFGF   Q+ QV D FA AGFNV + D   GN W ++ FPPK + +   W      W   + P    AVA +KE  GA   G  GFCWG  IAM+A       E      G  HP++   +L  A+ V+ PV+++P+  D D  P+K++LD++ +G KC Y+RFDD  HGF AARGDW+    A  A +AI     F
Sbjct:    4 SEACTAAGAPVVSTYEPKGTFERAGSTDVYLIGAGALGVVLVPDIFGFGHKQVFQVADRFAEAGFNVCVMDPFHGNPWTMDKFPPKPEHDFKGWLAREAGWGR-MRPHVHDAVAKLKE-AGATKFGCIGFCWGVSIAMQAGQ-----EATFSGVGGPHPSLFGHDLDFAEKVQCPVVLLPAEGDADTAPIKKILDRRAYGSKCVYQRFDDQTHGFVAARGDWSKPEVAAAAGKAIGIMADF 237          
BLAST of mRNA_E_fasciculatus_S2_contig8677.16788.1 vs.
Match: Alpha/Beta (hydrolase protein n=1 Tax=Syncephalastrum racemosum TaxID=13706 RepID=A0A1X2HGG9_SYNRA)

HSP 1 Score: 183 bits (465), Expect = 1.900e-52
Identity = 98/246 (39.84%), Postives = 131/246 (53.25%), Query Frame = 1
Query:  112 SAACCAAGPPVACDYTPKGTISKIGDVDTYFVG--SGPKAIVVVYDIFGFSPQLKQVCDMFA-AAGFNVAMPDFCKGNHWLLENFPPKDKSELGAWFGTTGKWETSILPTFIPAVAHMKEHRGAEVVGVTGFCWGGMIAMKAASLDADAEGAVKAGGNVHPAMLSAELAQDVKVPVLIMPSGEDPDHLPLKEVLDKKPFGDKCQYRRFDDMHHGFCAARGDWADAVQATRAAEAIDTFVKFYSANL 840
            S ACC   P     Y P G I  +GD+  Y VG     K++ V+YDIFGF    KQ CD+ A   G+ V MPDF +G  W      P D   L  W G  G  +  +LP  + AV    + +G    G+ GFCWG  IA++A + D+    A      +HP+ +  + A++   P+L +PS ++PD      VL KKPFG+ C++ RFDDMHHGF AARGDW D V   RA EA+     F+ A L
Sbjct:    4 SKACCTIPPVEGSTYEPTGVIENVGDLPVYVVGPKDAKKSVFVIYDIFGFHVNTKQFCDVLANRCGYRVVMPDFFRGEPWSPAKMTPADMPSLMEWVGKVGTIDV-VLPQ-LQAVRDWIKPQGVNQAGIVGFCWGAKIAVQATAKDSFFGSA----SLIHPSFVDTKDAEEAGAPILAIPSKDEPDMTEYMAVLAKKPFGNLCEHHRFDDMHHGFAAARGDWNDEVNKKRATEAVQLTANFFKATL 243          
BLAST of mRNA_E_fasciculatus_S2_contig8677.16788.1 vs.
Match: DLH (domain-containing protein n=1 Tax=Bifiguratus adelaidae TaxID=1938954 RepID=A0A261XW89_9FUNG)

HSP 1 Score: 181 bits (458), Expect = 1.920e-51
Identity = 100/250 (40.00%), Postives = 141/250 (56.40%), Query Frame = 1
Query:  100 ENMASAACCAAGPPVACDYTPKGTISKIGDVDTYFVGS--GPKAIVVVYDIFGFSPQLKQVCDMFAAAG-FNVAMPDFCKGNHWLLENFPPKDKSELGAWFGTTGKWETSILPTFIPAVAHMKEHRGAEVVGVTGFCWGGMIAMKAASLDADAEGAVKAGGNVHPAMLSAELAQDVKVPVLIMPSGEDPDHLPLKEVLDKKPFGDKCQYRRFDDMHHGFCAARGDWADAVQATRAAEAIDTFVKFYSANL 840
            ++ +  ACC+  PPV  +Y   GT+ ++GD+D Y VGS    +AI+V+YD++GF    KQ CD  A AG   VAMPDF +G  WL  N    ++  L  W    G  E   +P  + AV  M + +G   +G+ GFCWG  IA++A     D      A   +HP+ +S + A+  + PV+++ + ++PD     E L  KPFG KC + RF+DMHHGF AARGDW +  Q  RA EAI   V F+  NL
Sbjct:    2 QHSSEQACCSI-PPVDSNYKAVGTVKRLGDMDVYMVGSTTSNRAIIVLYDVYGFHKNTKQFCDRLAEAGNVQVAMPDFFRGKPWLASN--AGNREALVKWVTQVGTRE-KCMPD-LNAVKSMLQKQGVNQIGLVGFCWGAKIAVQATGESKD----YAAAALIHPSFISIDDAKSAQAPVMVLATKDEPDMTEYMEQLYAKPFGSKCTFTRFEDMHHGFAAARGDWENKEQNKRATEAIRLTVDFFRNNL 242          
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig8677.16788.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
DLH1.740e-17295.10domain-containing protein n=2 Tax=Ectocarpus TaxID... [more]
Alpha/Beta1.860e-9458.78hydrolase protein n=1 Tax=Tribonema minus TaxID=30... [more]
DLH1.190e-5644.40domain-containing protein n=1 Tax=Chlamydomonas sc... [more]
DLH1.230e-5644.49domain-containing protein n=2 Tax=Spizellomyces Ta... [more]
Alpha/beta-hydrolase3.130e-5641.20n=1 Tax=Basidiobolus meristosporus CBS 931.73 TaxI... [more]
DLH2.870e-5544.63domain-containing protein n=2 Tax=Chlamydomonas re... [more]
DLH1.130e-5444.81domain-containing protein n=1 Tax=Chlamydomonas in... [more]
DLH7.160e-5342.32domain-containing protein n=1 Tax=Chlamydomonas sc... [more]
Alpha/Beta1.900e-5239.84hydrolase protein n=1 Tax=Syncephalastrum racemosu... [more]
DLH1.920e-5140.00domain-containing protein n=1 Tax=Bifiguratus adel... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig8677contigE_fasciculatus_S2_contig8677:2..5184 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score487.6
Seed ortholog evalue3.3e-135
Seed eggNOG ortholog2880.D7FRF8
Model size1118
KEGG rclassRC01018,RC01906,RC01907,RC02441,RC02467,RC02468,RC02674,RC02675,RC02686
KEGG koko:K01061,ko:K14515,ko:K18272
KEGG ReactionR03893,R05510,R05511,R06835,R06838,R08120,R08121,R09136,R09220,R09222
KEGG Pathwayko00361,ko00364,ko00623,ko01100,ko01110,ko01120,ko01130,ko04016,ko04075,map00361,map00364,map00623,map01100,map01110,map01120,map01130,map04016,map04075
Hectar predicted targeting categoryother localisation
Exons7
EggNOG free text desc.Dienelactone hydrolase family
EggNOG OGsCOG0412@1,KOG3043@2759
Ec32 ortholog descriptionAlpha/Beta hydrolase fold
Ec32 orthologEc-08_000790.1
EC3.1.1.45
Cds size738
COG Functional cat.Q
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko04121,ko04147
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig8677.16788.1prot_E_fasciculatus_S2_contig8677.16788.1Ectocarpus fasciculatus EfasUO2polypeptideE_fasciculatus_S2_contig8677 277..5079 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842524.7289338-UTR-E_fasciculatus_S2_contig8677:1..2761696842524.7289338-UTR-E_fasciculatus_S2_contig8677:1..276Ectocarpus fasciculatus EfasUO2UTRE_fasciculatus_S2_contig8677 2..276 -
1696842524.8235936-UTR-E_fasciculatus_S2_contig8677:5079..51841696842524.8235936-UTR-E_fasciculatus_S2_contig8677:5079..5184Ectocarpus fasciculatus EfasUO2UTRE_fasciculatus_S2_contig8677 5080..5184 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842524.7448878-CDS-E_fasciculatus_S2_contig8677:276..3611696842524.7448878-CDS-E_fasciculatus_S2_contig8677:276..361Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8677 277..361 -
1696842524.7566874-CDS-E_fasciculatus_S2_contig8677:1172..13151696842524.7566874-CDS-E_fasciculatus_S2_contig8677:1172..1315Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8677 1173..1315 -
1696842524.767603-CDS-E_fasciculatus_S2_contig8677:1908..21521696842524.767603-CDS-E_fasciculatus_S2_contig8677:1908..2152Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8677 1909..2152 -
1696842524.778426-CDS-E_fasciculatus_S2_contig8677:2471..25691696842524.778426-CDS-E_fasciculatus_S2_contig8677:2471..2569Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8677 2472..2569 -
1696842524.789744-CDS-E_fasciculatus_S2_contig8677:2773..28381696842524.789744-CDS-E_fasciculatus_S2_contig8677:2773..2838Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8677 2774..2838 -
1696842524.8015478-CDS-E_fasciculatus_S2_contig8677:3235..33101696842524.8015478-CDS-E_fasciculatus_S2_contig8677:3235..3310Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8677 3236..3310 -
1696842524.812521-CDS-E_fasciculatus_S2_contig8677:5051..50791696842524.812521-CDS-E_fasciculatus_S2_contig8677:5051..5079Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8677 5052..5079 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E_fasciculatus_S2_contig8677.16788.1

>prot_E_fasciculatus_S2_contig8677.16788.1 ID=prot_E_fasciculatus_S2_contig8677.16788.1|Name=mRNA_E_fasciculatus_S2_contig8677.16788.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=246bp
MASAACCAAGPPVACDYTPKGTISKIGDVDTYFVGSGPKAIVVVYDIFGF
SPQLKQVCDMFAAAGFNVAMPDFCKGNHWLLENFPPKDKSELGAWFGTTG
KWETSILPTFIPAVAHMKEHRGAEVVGVTGFCWGGMIAMKAASLDADAEG
AVKAGGNVHPAMLSAELAQDVKVPVLIMPSGEDPDHLPLKEVLDKKPFGD
KCQYRRFDDMHHGFCAARGDWADAVQATRAAEAIDTFVKFYSANL*
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mRNA from alignment at E_fasciculatus_S2_contig8677:2..5184-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E_fasciculatus_S2_contig8677.16788.1 ID=mRNA_E_fasciculatus_S2_contig8677.16788.1|Name=mRNA_E_fasciculatus_S2_contig8677.16788.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=5183bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig8677:2..5184- (Ectocarpus fasciculatus EfasUO2)
GCACTCACGCGCCACTGACACGAGGCCAGGTATCAACTGCTGCGGTCGCA AACACTCTGCCGCGGCCGACTGCCTGACCAACACGAGCCATTGTGGAACG AAAACATGGCCTCTGCCGCCTGCTGCGCTGCTGGTGAGTCGTCATCTTTC ATTGTGCGTCACATGCCAGCCAATTGCTTCCTCTTATGCATAGTATGCAG CCAGCCGTGCTTTTACATACTGCTGTGTGCATGCATAGCGTGCATCGGCT GGTGTTTACAACTGCTGTTCCGCAAGATTGAGTCGTCGCACCCCCGTGCG GTCGTGTTTGAGACATATTCGCCGGTTCATTTTCAGCAAACAAAGGGGTG ACTCCAGACTACTACTCTACTACTGCTGTGCGATGACTCCGGACACCTGT CGTGCGGAAGTCAAGTTACATTTGGTGTTGATATTTGGCGCACACCTGGG GCCAGTGCGATACCAAACTCCGATGTGTGTGTACCATTTGCGGTGTAATC GAGTACTCTGAACCTTTGCGGACATAAGACCACGCGGTTGTGCTGCGGTT GCAGGGTCAACATGTATGCATACGCATACACGCCGCACGTCAGTCAACCA TTTAGCGCGGTGTGGATGCGGTTTGGACACTGGACACACAGACCTAAAGC GGCGACACAATACACGCGGCGAATTAAATCCGCCGGCGGAACAACCACCA AAATATCTCGCCGTCGACGTTTGTGCGAATACGCGACACAAAGCAATCAC TTGGCAAACATGTCAGAGAGTATTGTAGTGCCAATGTATTTTTTTATTTA TTTCTCGTTATTTTCTTCAAGGCACAGGTAGATGGAGATGGGCGCGATTT CCTGGTCCGTTGTTGTTGCTCTCTGCCTCCGGGCATTTTTCAGCGGGGCT AGCACCTACCTGTGGTCTCTGCAAGCAGCTCACCGTGACTCAACGCCTCA GAGTTGTCTAGACTAGACTAATCCCTTGGCCGGGAGTCACAAGAAATCGA GACAACGGCTGTCTGTGCCGTAAATAGGAGTACCTACGAAGAAGTTCGAT GTGGCGGCGTATCTATATTTCCCCCTGGCCCGACTGCTGTCGCTTTTGCA TTGATTTTGGACCATCGAGATGCCTCCCGAAAGCGGGAGAAAAAAATAGT TCCTACCCGCGGGCGGGTGTGGGCAGGTAAAGCAGGTGTAGGAACGCCTC TCCGTAACTTGGACAGAGCGGGCGCGACTAACGCCTAGCGTCAAAAGGAG CAGCACAGCTGCAGCAGCACGTCACAGCCATTTTCCGTGCCGCAAACAAA CACCTCCGTGTCTTCTTGAGCAGCATTTGACTCTCGGCTTTTTTCGGTTG CTTTTTACAAAGGACACGACACATTGCTTGTACTCCTCGGGGCAAAAGGA CACGGGTCGGTGCAACAAAAGACGTTACACGTAGTCTGGCCAGTTATGTT TATTCGTCGTGTTAACTTTCGAAAGAACAGCGTAACGAGAGGCAAACGCC CAGAACGGTTAGGCACTTCTACAGCAGTAGCATCGCATAGCCATCCGACA CACCTCATGAATTACAACTTCGGTGCTGTCGTGTTGTCTGTATGTACTTG CTTTTTTTCCTGCTGCATGTTTTTGTGCCGCCAAGCTACCTTTTACGAGT GCCTACACCTATGCTCTGAGTGCCCATAGGTGACCCATCTACCTGTCCTC AACAAATACATCAAGATGACCCATTTCTGAAACCCCGCTGCACAACTACG GTAAAACCCAGGCCGGACTGCCTCATTACACAGAAGAGATCTCACGGCTG GCTGCCGCTTTGCTATGCATACTTCTCTGCCGGTACGTATTTTTGCGCGC TTTCCACCCCACCGTTCTTCGCAGGTCCTCCAGTCGCATGTGACTACACC CCCAAAGGCACTATCTCCAAGATCGGGGACGTCGACACGTACTTCGTCGG TCAGTGCCTGCATCATTTCCCTACCTTCGCTCGATATGTAAATTATGTGT TCACACGTTCACAGCAGGTACTTCTGTAGAAATGATAGCCCGGAGGTAGC CCCCGCCTCCACTGAAGCCCTGTTCCTTTTTGGTAGAGGGCTCTCACACC AGAAAGCTTACGAAGAAAACTCTCTAGGGTTTGCGATTTCTACAACGATC CAACGAACACGGGCTGGGCTGCCTCCTTGTTGTGTGCGCCTTTATTCCGT CTATTTCGGACGTCGCAGTACACACCGGGCTGGTGGAACAGCATCACTTA CTGATGGAGCAGCCTGTGTTTCTGAGCCTACTCCACTATTCCTAAGCTTG GTCTCGAATGGTACGGCTGCCTTTTTTCTTGCACACACCGCGGCAGGGTC TGGCCCCAAGGCAATCGTGGTCGTATACGACATCTTCGGCTTCAGCCCTC AACTCAAACAGGTGCACAGTAGCCCACAGAACTTTACCTCTGTGTGTCGA GACGCTACACGATACAGTAGTGCAATGAACTCTTCGTTTAACCTTTACCG TGCTTGGGAGATGTCCTCGACCAACCCCACCAACCTCACCTGCTCGGTAA CATCTGCTCACTGCGATGAACTGCGTTGTGTCTGCCATCTGCCGAAACTT TTACGAGAAACATAGGTCTGCGACATGTTCGCGGCTGCTGGCTTCAACGT GGCCATGCCCGACTTTTGCAAGGGAAACCACTGGCTTCTGGAAAACTTCC CGCCTAAGGACAAGTGAGTCTCTCTGGACACCCACCTTGGGTGCCAAGTT TTTCGAACTCGCTTGATGCGGCACAATCGTCGAACCCCACCAAGCCCGAG CAGCAACCACCCAAAGCTTAGGTGACAGAGTGCCCTGCCTAACATGGGGC GTGTCTGCAGCCATTTTTCTACTGAGAAACATTTCGATGGTATTGTAGCC GAAAACCGCACATGGCCTCGGGGGGTGATTGGCCAGAAAAACGGCATGCA CCTGACATACATGTGTGGCGTATTTGACTGAATCGGTGAAAGCGTGACTC CGTATTGCCCCACCCCCCGTTTTTGCCTACAGGAGCGAACTTGGGGCTTG GTTCGGTACAACCGGGAAATGGGAGACGTCCATACTCCCTACGTTCATCC CCGCCGTTGCCCACATGAAGGAGCACAGGGGGGCCGAAGTGGTCGGAGTG ACAGGCTTCTGCTGGGGAGGCATGATCGCCATGAAGGCCGCGTCTCTAGA CGCCGACGCCGAGGGAGCCGTCAAGGCGGGCGGCAACGTGCACCCGGCCA TGCTCTCGGCTGAGCTTGCGCAAGACGTGAGGCATGGAAGGAAAAGGATG GGGGAGGGATACTCCAGCCGTGCCGTAGTAGTTTAGACCATTGACCTCGC AGCATGGGGGGGGGGGAGGTTGAGCGCTTGTTGTTGTTTCCTTGGAGACG ATGGGCCGCAAATGCAGAAAAGCTCGTCCTTTTTTCGTGTTATGCGCCAG TTTCTCCGGGGCGGTAGTGGCACACAAATGCGAGTGAGATAAGGGGCGGC GTTTGTTGCGGGCCGCACGTCGTGTAGCAGAAAGAAGGGGCAGATGAGGA AAGGGCGAGCCGGGGCCGCCAGATAGGCAGACAGGCTGCAGACGAGCACC TTCTTTGGAGTCCCTTCTTTCTCTCGAGAATTCCAAGCGAATCGCGCCGT TTGACGCCCCGCTCCTCCTAGTTCTGGACGTGGTCACTTAATCATGCCCG GACCTGTCATCCGCCGTGCAGAAACTTTTTTTGTTTTCCTTTTTTTTCGT GGGTGTGGGGGCAGACGTTAAGGTACCCGTGATGAAACCGTTTTTTTCTT TTTTTATCTGTATTTTTTGCCAGGTGCCCGTGCTGAAACCGTTTTTTCGT TTTATTGTTGTTTGGCCAGGTGAAGGTACCCGTGCTGATCATGCCGTCAG GGGAGGACCCCGACCACCTCCCCCTGAAGGAGGTCTTGGACAAGAAGCCG TTCGGTGACAAGTGCCAGTACCGCCGGTTCGACGACATGCACCACGGATT CTGCGCGGCCAGGTGTGCATGTAGACTAAGCATTTAGGTCAGCACCATCT TTATCTGGCCGAAATTCACTCTTGTGGTTCTACAAGATGAAGCGTTTGCG CCTGTCGGGGTGATTTTCGTGTCCGTCAAGTGTTTTTTTTCGAACAGCAT CAAACGTTGGCCGTTTCAGTCAGCGGGACAACTTCATTGAAGTCCATCCG TATTGTCGCTTCCTTTTCTTGGTTTGCGTATGTATGGACCACGTGACGAA AACCGATGCCCAACAAAACTTCTGTAAACTTGGCCCGATGCACCGCACCT TCTTCCGGCGGCGAGCTGGGGGTATTGCCTTTCTTGGAGGCACACCTGGT TGAATTTTCCTGGCAGCTCTCGTACGCCGTGCAGTCCTTTTTTTTCCGCC ACTTTACATCAGCGTGCCATGGCTCACAGCATTTCCTGCCGGGTAGGAGC TCCACCAGCTTTGGAAGTACGAACAAGAATGGCACCGCCCGATTCTTTTT TTGTTTGGCAATGGCAATTCCTTGCTCCCCTCGTTGTCACGATCAAGTTT CTTAGATTTTCTCTAAAAAATACGCACAACAATCAAAGAGTATCGACGTA ATTCCCCGTTCGAAGGGATATTCAAGTCTTGCGTTTTTGCAGTCACGTTT AGGGGAACCTCATACTGGAGTGAGATATTACACAAAATCAGGCTACCTTC GGCATATTACCCCGTTTCCGAAGAGACGTGTTGGAGTCTGTACAGTGAGG GTTGAGGGTAACCTGCTGGATGATGATGCTGGACTCAATCATCTGCCTTG AAATTGCTGTCGCTCCGCGTCAGGGGCGACTGGGCGGACGCTGTGCAAGC GACCAGGGCCGCCGAGGCTATCGACACGTTCGTCAAGTTTTACAGCGCCA ACCTCTAGGCTGTACTCGTCACGCCGATGGGTAGAGCATCTGCTTGCCCG CGTCCGTGAGTGTTTCAAAGTTGTTTTAAAAGCAAACCGACGAATATCGT CGTATTATTGAACTCATCATCATGAGTGCAACAGGGCACGGGTCAGAGCA AACGTAGGGCGAGACATGGGGCAGTTCCCACTACTTGCGCCGTAGTATCC CCCCCCCCCCCCAGCGTGGTGAATGCGAGCCTGGCCGGCGAAAACCCGGC GTGCTCCGTCCCGGCTTTGTAGGGATGCGAGGT
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Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig8677:2..5184-

>mRNA_E_fasciculatus_S2_contig8677.16788.1 ID=mRNA_E_fasciculatus_S2_contig8677.16788.1|Name=mRNA_E_fasciculatus_S2_contig8677.16788.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=738bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig8677:2..5184- (Ectocarpus fasciculatus EfasUO2)
ATGGCCTCTGCCGCCTGCTGCGCTGCTGGTCCTCCAGTCGCATGTGACTA
CACCCCCAAAGGCACTATCTCCAAGATCGGGGACGTCGACACGTACTTCG
TCGGGTCTGGCCCCAAGGCAATCGTGGTCGTATACGACATCTTCGGCTTC
AGCCCTCAACTCAAACAGGTCTGCGACATGTTCGCGGCTGCTGGCTTCAA
CGTGGCCATGCCCGACTTTTGCAAGGGAAACCACTGGCTTCTGGAAAACT
TCCCGCCTAAGGACAAGAGCGAACTTGGGGCTTGGTTCGGTACAACCGGG
AAATGGGAGACGTCCATACTCCCTACGTTCATCCCCGCCGTTGCCCACAT
GAAGGAGCACAGGGGGGCCGAAGTGGTCGGAGTGACAGGCTTCTGCTGGG
GAGGCATGATCGCCATGAAGGCCGCGTCTCTAGACGCCGACGCCGAGGGA
GCCGTCAAGGCGGGCGGCAACGTGCACCCGGCCATGCTCTCGGCTGAGCT
TGCGCAAGACGTGAAGGTACCCGTGCTGATCATGCCGTCAGGGGAGGACC
CCGACCACCTCCCCCTGAAGGAGGTCTTGGACAAGAAGCCGTTCGGTGAC
AAGTGCCAGTACCGCCGGTTCGACGACATGCACCACGGATTCTGCGCGGC
CAGGGGCGACTGGGCGGACGCTGTGCAAGCGACCAGGGCCGCCGAGGCTA
TCGACACGTTCGTCAAGTTTTACAGCGCCAACCTCTAG
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