mRNA_E_fasciculatus_S2_contig8664.16777.1 (mRNA) Ectocarpus fasciculatus EfasUO2

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E_fasciculatus_S2_contig8664.16777.1
Unique NamemRNA_E_fasciculatus_S2_contig8664.16777.1
TypemRNA
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Homology
BLAST of mRNA_E_fasciculatus_S2_contig8664.16777.1 vs.
Match: Hydrolase_4 (domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KFL3_9PHAE)

HSP 1 Score: 490 bits (1262), Expect = 3.570e-173
Identity = 250/269 (92.94%), Postives = 258/269 (95.91%), Query Frame = 1
Query:   10 RRGGSVWYRRWAPQSKAIAMLFIAHGLHSHSGRWSKVAHHYTEKGYVVFANDHIGHGLTVEALEGGGNNSGMVQDHSRMTDDFTEFVEKMVEQEEDKTLPVMIFGHSMGSLVATVSATTLTEHAVVGPRVKKLALSGCPIVPGPGSASPFGLRCLYPINRAPGLVRRLSGLLARMDPVGPAAPIDQGALSSDPEVAPEAAVDPLMVKGSVRNKTAFEVLKLVQVAKQSACKVSVPTLLIHGGDDDIAYPSGAEEMKSLLTASSSVDLEV 816
            RRGGSVWYRRWAPQSKAIAMLFIAHGLHSHSGRWSK+AH+YTEKGYVVFANDHIGHGLTV+A+EGGG NSGMV+DHSRMTDDFTEFV KMV QEEDKTLPVMI GHSMGSLVATVSAT LTEHAVVGPRVKKLALSGCPIVPGPGSASPFGLRCLYPINRA GLVRRLSGLLARMDP GPAAP+DQG+LSSDPEV  EAAVDPLMVKGSVRNKTAFEVLKLVQVAKQSACKVSVP LLIHGGDDD+AYPSGAEEMKSLLTASSSV LEV
Sbjct:   46 RRGGSVWYRRWAPQSKAIAMLFIAHGLHSHSGRWSKLAHYYTEKGYVVFANDHIGHGLTVQAVEGGGTNSGMVEDHSRMTDDFTEFVVKMVGQEEDKTLPVMILGHSMGSLVATVSATKLTEHAVVGPRVKKLALSGCPIVPGPGSASPFGLRCLYPINRASGLVRRLSGLLARMDPGGPAAPLDQGSLSSDPEVKLEAAVDPLMVKGSVRNKTAFEVLKLVQVAKQSACKVSVPVLLIHGGDDDMAYPSGAEEMKSLLTASSSVALEV 314          
BLAST of mRNA_E_fasciculatus_S2_contig8664.16777.1 vs.
Match: Putative (lysophospholipase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8A9_9STRA)

HSP 1 Score: 210 bits (535), Expect = 3.040e-63
Identity = 115/261 (44.06%), Postives = 159/261 (60.92%), Query Frame = 1
Query:   16 GGSVWYRRWAPQSKAIAMLFIAHGLHSHSGRWSKVAHHYTEKGYVVFANDHIGHGLTVEALEGGGNNSGMVQDHSRMTDDFTEFVEKMVEQEEDKTLPVMIFGHSMGSLVATVSATTL-TEHAVVGPRVKKLALSGCPIVPGPGSASPFGLRCLYPINRAPGLVRRLSGLLARMDPVGPAAPIDQGALSSDPEVAPEAAVDPLMVKGSVRNKTAFEVLKLVQVAKQSACKVSVPTLLIHGGDDDIAYPSGAEEMKSLLTAS 795
            G ++ +R W P  +    +FI HGLH HSGR+S+VA +   KGY V+ANDH GHGL+       G+N G V D+  M+D   EFV+ M++ +  +  PV +  HSMG++V  V+   L  E A +  R+K +A +GC + PGPGSASP GL C + + ++ GL+  L    A  DP GP APID   LS DPEVA     D    +G ++NKTA EV+KL    ++    +++P LL+HGGDD I YP G+EEM SLL +S
Sbjct:   27 GDAIGFRTWTPAGEVRGTVFIVHGLHEHSGRYSRVAEYLNGKGYAVYANDHAGHGLSA------GDNMGFVSDYRHMSDAVAEFVKTMLDGQPLER-PVYMLCHSMGAMVGAVALAKLKAEDAALYGRIKGVAFTGCALSPGPGSASPLGLTCCFCLTKSKGLLHCLVACFATADPHGPNAPIDDACLSHDPEVAARLKKDFYHFRGRIKNKTAHEVVKLSDKTREVLPTLTLPCLLMHGGDDTICYPDGSEEMLSLLGSS 280          
BLAST of mRNA_E_fasciculatus_S2_contig8664.16777.1 vs.
Match: Hypothetical (protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UUJ9_HETAK)

HSP 1 Score: 154 bits (389), Expect = 1.590e-41
Identity = 91/254 (35.83%), Postives = 136/254 (53.54%), Query Frame = 1
Query:   10 RRGGSVWYRRWAPQSKAIAMLFIAHGLHSHSGRWSKVAHHYTEKGYVVFANDHIGHGLTVEALEGGGNNSGMVQDHSRMTDDFTEFVEKMVEQEEDKTLPVMIFGHSMGSLVATVSATTLTE-HAVVGPRVKKLALSGCPIVPGPGSASPFGLRCLYPINRAPGLVRRLSGLLARMDPVGPAAPIDQGALSSDPEVAPEAAVDPLMVKGSVRNKTAFEVLKLVQVAKQSACKVSVPTLLIHGGDDDIAYPSGAE 768
            + G  + YR W P +K  A++F+ HGLH H GR+S  +H  T +G+ VFA+DHI HG +    +    + G++     + DD  +F + + +Q  +  LPV++ GHSMGS++A  +   L +  A V  RVK   +SG  I  G  +ASP GL+ LY +N    ++R L+   A  DP GP AP+    LS D E       D L+  G  RNKTA E+ K +     +  +   P  ++HGG+D I  P  A+
Sbjct:   25 QNGDLIGYRSWIPINKPRALVFLVHGLHEHGGRYSGFSHVLTAQGFAVFAHDHISHGRSRMIQD----SMGLIPSMDEVIDDAVQFWKSIAQQYAE--LPVLVMGHSMGSIIAGNAMVALKDADADVAARVKGAVISGASIKNGVNAASPLGLKWLYCLNSCGPMMRCLTSGFAAADPTGPGAPLFDDFLSHDIEYVAARRRDELVYHGWTRNKTAAEIYKGINSLHSNFTRFDYPVYIVHGGEDSICLPVSAQ 272          
BLAST of mRNA_E_fasciculatus_S2_contig8664.16777.1 vs.
Match: Hydrolase_4 (domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9DAP3_9STRA)

HSP 1 Score: 146 bits (368), Expect = 5.610e-38
Identity = 84/252 (33.33%), Postives = 141/252 (55.95%), Query Frame = 1
Query:   16 GGSVWYRRWAPQS--KAIAMLFIAHGLHSHSGRWSKVAHHYTEKGYVVFANDHIGHGLTVEALEGGGNNSGMVQDHSRMTDDFTEFVEKMVEQEEDKTLPVMIFGHSMGSLVATVSATTLTEHAVVGPRVKKLALSGCPIVPGPGSASPFGLRCLYPINRAPGLVRRLSGLLARMDPVGPAAPIDQGALSSDPEVAPEAAVDPLMVKGSVRNKTAFEVLKLVQVAKQSACKVSVPTLLIHGGDDDIAYPSGA 765
            GG ++ R W P+      + +F+AHG++ H GR+  +AH  T KG+ VF +DH GHGL+       G + G V+D + +  D  + +    +++  + +P  I GHSMG++VA  +A  L+  A     +  +  SGC +VPGP +ASPFG+R L+ + ++      + GL+AR+DP GP AP+ +  L+ D +       DPL  +G + N+T  ++L+  +  K+     ++P L +HG  D + YP G+
Sbjct:   35 GGRLFTRTWIPKDCVTPASCIFLAHGVNEHIGRYCDLAHSLTAKGHKVFGHDHWGHGLS-------GGHRGDVEDLNYLIGDLKQLI--AAQRDNHRGVPFFIIGHSMGTIVAFHAALELSSEAPS--LLHGVIFSGCALVPGPAAASPFGVRFLFCLTKSEWASSAIGGLMARLDPRGPLAPVVESELTRDTKELEALQRDPLHNRGPLLNRTGNQLLQKCREMKERLPHFTLPFLAMHGAADTVTYPEGS 275          
BLAST of mRNA_E_fasciculatus_S2_contig8664.16777.1 vs.
Match: Alpha-beta (hydrolase superfamily lysophospholipase n=2 Tax=Nocardia mexicana TaxID=279262 RepID=A0A370H203_9NOCA)

HSP 1 Score: 112 bits (280), Expect = 6.490e-26
Identity = 79/252 (31.35%), Postives = 121/252 (48.02%), Query Frame = 1
Query:   13 RGGSVWYRRWAPQSKAIAMLFIAHGLHSHSGRWSKVAHHYTEKGYVVFANDHIGHGLTVEALEGGGNNSGMVQDHSRMTDDFTEFVEKMVEQEEDKTLPVMIFGHSMGSLVATVSATTLTEHAVVGPRVKKLALSGCPIVPGPGSASPFGLRCLYPINRAPGLVRRLSGLLARMDPVGPAAPIDQGALSSDPEVAPEAAVDPLMVKGSVRNKTAFEVLKLVQVAKQSACKVSVPTLLIHGGDDDIAYPSGAE 768
            RGG +++R W P+ +   ++ + HG+  HSGR+  V       G+ V+A DHIGHG +        +  G   + +RM +  TE             LP  + GHSMGSLV T+   T     V G     +A+S  P+V   G+          P+ R       L+ +L+R  P      +D  A+S DPEV      DPL+  G +  +T  E+L+  +   +   +++VPTL++HGG D IA PS A+
Sbjct:   12 RGGGIFWRAWVPEGEVRGVVVLVHGVAEHSGRYEHVGERLARSGFGVYALDHIGHGQSAGGQANIDSMDGAADNVARMLEIATE---------RHPGLPRFVVGHSMGSLV-TLYLATRAPLDVAG-----IAVSAPPLVIEAGN----------PVQRL------LAPVLSRWAPKLGVLQLDSSAISRDPEVVRAYDADPLVFSGKLPARTGAEILRATETVVRRLPRLTVPTLVLHGGADTIAAPSSAD 232          
BLAST of mRNA_E_fasciculatus_S2_contig8664.16777.1 vs.
Match: Lipase (n=3 Tax=Sphingomonadaceae TaxID=41297 RepID=A0A2D3RIX7_9SPHN)

HSP 1 Score: 111 bits (278), Expect = 1.320e-25
Identity = 79/261 (30.27%), Postives = 127/261 (48.66%), Query Frame = 1
Query:   16 GGSVWYRRWAPQSKAIAMLFIAHGLHSHSGRWSKVAHHYTEKGYVVFANDHIGHGLTVEALEGGGNNSGMVQDHSRMTDDFTEFVEKMVEQEEDKTLPVMIFGHSMGSLVATVSAT-TLTEHAVVGPRVKKLALSGCPIVPGPGSASPFGLRCLYPINRAPGLVRRLSGLLARMDPVGPAAPIDQGALSSDPEVAPEAAVDPLMVKGSVRNKTAFEVLKLVQVAKQSACKVSVPTLLIHGGDDDIAYPSGAEEMKSLLTAS 795
            G  +++++W P +   A++ + HG   HSGR+   A H   KGY VFA DH GHG +          +G V D S   D     + +  +   D  LPVM+ GHSMG L+   SAT  LTE             + C ++ GP          +         ++ +SG L+R  P      +D   +S DPEV  +   DPL+  G +  + A E+L  + + +++A ++S+P LL+HGG D +A  +G+E +   +++S
Sbjct:   11 GAKIFWQKWLPDNDPKAIILLVHGYAEHSGRYQYFAEHCVGKGYAVFALDHWGHGKS-------DGTAGFVPDFSVFRDGVDRLLAQAKQDLSD--LPVMLVGHSMGGLI---SATYLLTEQG---------NFAAC-VLSGPA---------IQAAEEPSAALKAISGFLSRFFPKLGVLELDPNGVSRDPEVVADYLADPLVYNGKMGARLAAEMLANMTMVQENAGRISLPMLLLHGGQDSLAGVAGSEFLVRHISSS 240          
BLAST of mRNA_E_fasciculatus_S2_contig8664.16777.1 vs.
Match: Putative (monoacylglycerol lipase n=2 Tax=Gordonia sihwensis TaxID=173559 RepID=L7LPT4_9ACTN)

HSP 1 Score: 107 bits (267), Expect = 5.380e-24
Identity = 80/254 (31.50%), Postives = 117/254 (46.06%), Query Frame = 1
Query:    1 MLGRRGGSVWYRRWAPQSKAIAMLFIAHGLHSHSGRWSKVAHHYTEKGYVVFANDHIGHGLTVEALEGGGNNSGMVQDHSRMTDDFTEFVEKMVEQEEDKTLPVMIFGHSMGSLVATVSATTLTEHAVVGPRVKKLALSGCPIVPGPGSASPFGLRCLYPINRAPGLVRRLSGLLARMDPVGPAAPIDQGALSSDPEVAPEAAVDPLMVKGSVRNKTAFEVLKLVQVAKQSACKVSVPTLLIHGGDDDIAYPSG 762
            + G  G S+ Y    P+S A+ ++ I+HGL  H+GR+  VA   T+ GYVV A DH GHG +      GG   G+         DFT  +  ++EQ +    P  + GHSMG  +A   A    EH  V   +  L LSG  +VPG               +  PG + RL+ ++ R+ P  PA  +   A+S DP V      DPL+  G +       ++  +         ++ PTL +HGG D +A P G
Sbjct:    8 VAGVHGVSIVYDVHRPESGAVGVVIISHGLGEHAGRYRHVAQRLTDLGYVVVAPDHAGHGRS------GGRRLGVTDFR-----DFTSDLHTVIEQTDRGDGPTFLIGHSMGGAIALDYAL---EHPGV---LDGLVLSGAALVPG---------------DDLPGFMVRLAPVIGRLVPRLPATALPASAVSRDPNVVAAYEADPLVWHGKIPAGLGGALISTMATFPDRLPSLTTPTLALHGGGDRLANPEG 229          
BLAST of mRNA_E_fasciculatus_S2_contig8664.16777.1 vs.
Match: Phospholipase (ytpA n=14 Tax=Nocardiaceae TaxID=85025 RepID=A0A378WNY6_9NOCA)

HSP 1 Score: 107 bits (266), Expect = 6.940e-24
Identity = 81/260 (31.15%), Postives = 129/260 (49.62%), Query Frame = 1
Query:   13 RGGSVWYRRWAPQSKAIAMLFIAHGLHSHSGRWSKVAHHYTEKGYVVFANDHIGHGLTVEALEGGGNNSGMVQDHSRMTDDFTEFVEKMVEQEEDKTLPVMIFGHSMGSLVATVSATTLTEHAVVGPRVKKLALSGCPIVPGPGSASPFGLRCLYPINRAPGLVRRLSGLLARMDPVGPAAPIDQGALSSDPEVAPEAAVDPLMVKGSVRNKTAFEVLKLVQVAKQSACKVSVPTLLIHGGDDDIAYPSGAEEMKSLLTA 792
            RGG V++R W P  +A A++ + HG+  HSGR+  V     + G+ V+A DHIGHG +     GGG ++  ++      D+    ++  +   +   LP  + GHSMGSL+ T+   T     V G     +A+S  P+V   G+          P+ R       L+  L+R  P      +D   +S DPEV      DPL+ +G +  +TA E+L+           + VPTL++HGG+D +A P GA+ +++  TA
Sbjct:   12 RGGQVFWRAWLPD-RARAVVVLVHGVAEHSGRYDHVGKRLADSGFAVYAFDHIGHGRS-----GGGRSN--IESIDAAADNVNTMLD--IASAKHPGLPRFVLGHSMGSLI-TLYLATRAPLEVAG-----IAVSAPPVVIEAGN----------PVQRL------LAPALSRWVPNLGVLQLDSTQISRDPEVVRAYDQDPLVYRGKLPARTATEILRGADFVLAHLDALRVPTLVLHGGEDALAAPVGADRIEAGATA 239          
BLAST of mRNA_E_fasciculatus_S2_contig8664.16777.1 vs.
Match: Alpha/beta (hydrolase n=1 Tax=Nocardia veterana TaxID=132249 RepID=A0A7X6M2Y9_9NOCA)

HSP 1 Score: 105 bits (263), Expect = 1.880e-23
Identity = 79/256 (30.86%), Postives = 124/256 (48.44%), Query Frame = 1
Query:   13 RGGSVWYRRWAPQSKAIAMLFIAHGLHSHSGRWSKVAHHYTEKGYVVFANDHIGHGLTVEALEGGGNNSGMVQDHSRMTDDFTEFVEKMVEQEEDKTLPVMIFGHSMGSLVATVSATTLTEHAVVGPRVKKLALSGCPIVPGPGSASPFGLRCLYPINRAPGLVRRLSGLLARMDPVGPAAPIDQGALSSDPEVAPEAAVDPLMVKGSVRNKTAFEVLKLVQVAKQSACKVSVPTLLIHGGDDDIAYPSGAEEMKS 780
            RGG V++R W P  +  A++ + HG+  HSGR+  V     + G+ V+A DHIGHG +     GG  N   ++      D+    +E  +       +P  + GHSMGSL+ T+   T     V G     +A+S  P+V   G+                 L R L+  L+R  P      +D  A+S DPEV      DPL+ +G +  +TA E+L+  +        + VPTL++HGG D++A P GA+ +++
Sbjct:   12 RGGRVFWRAWLPD-RVRAVVVLVHGVAEHSGRYDHVGKRLADSGFAVYAFDHIGHGRSA----GGQAN---IESIDAAADNVNTMLE--IASATYPAVPRFVLGHSMGSLI-TLYLATRAPLDVAG-----IAVSAPPVVIEAGNP----------------LQRLLAPALSRWAPKLGVLQLDSSAISRDPEVVRAYDRDPLVYRGKLPARTAAEILRGAEFVLGHLAALQVPTLVLHGGADELAAPEGADRIEA 235          
BLAST of mRNA_E_fasciculatus_S2_contig8664.16777.1 vs.
Match: Lysophospholipase (n=1 Tax=Gordonia iterans TaxID=1004901 RepID=A0A2S0KE05_9ACTN)

HSP 1 Score: 103 bits (256), Expect = 1.780e-22
Identity = 78/254 (30.71%), Postives = 116/254 (45.67%), Query Frame = 1
Query:    1 MLGRRGGSVWYRRWAPQSKAIAMLFIAHGLHSHSGRWSKVAHHYTEKGYVVFANDHIGHGLTVEALEGGGNNSGMVQDHSRMTDDFTEFVEKMVEQEEDKTLPVMIFGHSMGSLVATVSATTLTEHAVVGPRVKKLALSGCPIVPGPGSASPFGLRCLYPINRAPGLVRRLSGLLARMDPVGPAAPIDQGALSSDPEVAPEAAVDPLMVKGSVRNKTAFEVLKLVQVAKQSACKVSVPTLLIHGGDDDIAYPSG 762
            ++GRRG ++ Y    P S+A+ ++ + HGL  H+GR+  V    T  GYVV A DH GHG +           G   D  R   DF   V+++++  E   LP+ + GHSMG  +A   A    +       +  L LSG  +VPG               +  P ++  L+ +L RM P  PA  +   A+S DP V      DPL+  G +       ++  +         +SVPTL +HGG D +A P G
Sbjct:    8 LVGRRGRTIVYDVHRPDSEAVGVVALVHGLGEHAGRYEHVIARLTGAGYVVVAPDHAGHGRS----------DGTPAD-VREFGDFVADVKRVIDSVERAGLPLYVIGHSMGGAIALSYALDHPDG------LAGLVLSGPAVVPG---------------DDLPPVMIALAPVLGRMVPRLPATALSASAVSRDPAVVAAYEADPLVYHGKIPAGLGGTLIAEMTTFPDRLPSLSVPTLCLHGGQDVLANPEG 229          
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig8664.16777.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Hydrolase_43.570e-17392.94domain-containing protein n=2 Tax=Ectocarpus TaxID... [more]
Putative3.040e-6344.06lysophospholipase n=1 Tax=Tribonema minus TaxID=30... [more]
Hypothetical1.590e-4135.83protein n=1 Tax=Heterosigma akashiwo TaxID=2829 Re... [more]
Hydrolase_45.610e-3833.33domain-containing protein n=2 Tax=Monodopsidaceae ... [more]
Alpha-beta6.490e-2631.35hydrolase superfamily lysophospholipase n=2 Tax=No... [more]
Lipase1.320e-2530.27n=3 Tax=Sphingomonadaceae TaxID=41297 RepID=A0A2D3... [more]
Putative5.380e-2431.50monoacylglycerol lipase n=2 Tax=Gordonia sihwensis... [more]
Phospholipase6.940e-2431.15ytpA n=14 Tax=Nocardiaceae TaxID=85025 RepID=A0A37... [more]
Alpha/beta1.880e-2330.86hydrolase n=1 Tax=Nocardia veterana TaxID=132249 R... [more]
Lysophospholipase1.780e-2230.71n=1 Tax=Gordonia iterans TaxID=1004901 RepID=A0A2S... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig8664contigE_fasciculatus_S2_contig8664:148..6034 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start1
Seed ortholog score502.3
Seed ortholog evalue1.4e-139
Seed eggNOG ortholog2880.D7G0W7
Model size816
KEGG rclassRC00020,RC00041
KEGG koko:K01054
KEGG ReactionR01351
KEGG Pathwayko00561,ko01100,ko04714,ko04723,ko04923,map00561,map01100,map04714,map04723,map04923
KEGG ModuleM00098
Hectar predicted targeting categorymitochondrion
Exons8
EggNOG free text desc.acylglycerol lipase activity
EggNOG OGsCOG2267@1,KOG1455@2759
Ec32 ortholog descriptionPutative lysophospholipase, monoglyceride lipase
Ec32 orthologEc-23_002030.1
EC3.1.1.23
Cds size816
COG Functional cat.I
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01002
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig8664.16777.1prot_E_fasciculatus_S2_contig8664.16777.1Ectocarpus fasciculatus EfasUO2polypeptideE_fasciculatus_S2_contig8664 148..6034 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842523.501638-CDS-E_fasciculatus_S2_contig8664:147..2171696842523.501638-CDS-E_fasciculatus_S2_contig8664:147..217Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8664 148..217 +
1696842523.513938-CDS-E_fasciculatus_S2_contig8664:838..9501696842523.513938-CDS-E_fasciculatus_S2_contig8664:838..950Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8664 839..950 +
1696842523.5319767-CDS-E_fasciculatus_S2_contig8664:1836..19331696842523.5319767-CDS-E_fasciculatus_S2_contig8664:1836..1933Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8664 1837..1933 +
1696842523.5455298-CDS-E_fasciculatus_S2_contig8664:2222..23611696842523.5455298-CDS-E_fasciculatus_S2_contig8664:2222..2361Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8664 2223..2361 +
1696842523.556561-CDS-E_fasciculatus_S2_contig8664:2783..28531696842523.556561-CDS-E_fasciculatus_S2_contig8664:2783..2853Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8664 2784..2853 +
1696842523.5671184-CDS-E_fasciculatus_S2_contig8664:3644..37241696842523.5671184-CDS-E_fasciculatus_S2_contig8664:3644..3724Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8664 3645..3724 +
1696842523.5779965-CDS-E_fasciculatus_S2_contig8664:4435..45691696842523.5779965-CDS-E_fasciculatus_S2_contig8664:4435..4569Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8664 4436..4569 +
1696842523.5885742-CDS-E_fasciculatus_S2_contig8664:5920..60341696842523.5885742-CDS-E_fasciculatus_S2_contig8664:5920..6034Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8664 5921..6034 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E_fasciculatus_S2_contig8664.16777.1

>prot_E_fasciculatus_S2_contig8664.16777.1 ID=prot_E_fasciculatus_S2_contig8664.16777.1|Name=mRNA_E_fasciculatus_S2_contig8664.16777.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=272bp
MLGRRGGSVWYRRWAPQSKAIAMLFIAHGLHSHSGRWSKVAHHYTEKGYV
VFANDHIGHGLTVEALEGGGNNSGMVQDHSRMTDDFTEFVEKMVEQEEDK
TLPVMIFGHSMGSLVATVSATTLTEHAVVGPRVKKLALSGCPIVPGPGSA
SPFGLRCLYPINRAPGLVRRLSGLLARMDPVGPAAPIDQGALSSDPEVAP
EAAVDPLMVKGSVRNKTAFEVLKLVQVAKQSACKVSVPTLLIHGGDDDIA
YPSGAEEMKSLLTASSSVDLEV
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mRNA from alignment at E_fasciculatus_S2_contig8664:148..6034+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E_fasciculatus_S2_contig8664.16777.1 ID=mRNA_E_fasciculatus_S2_contig8664.16777.1|Name=mRNA_E_fasciculatus_S2_contig8664.16777.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=5887bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig8664:148..6034+ (Ectocarpus fasciculatus EfasUO2)
ATGCTCGGTAGGCGAGGGGGGAGCGTCTGGTACAGGAGGTGGGCTCCTCA GTCCAAGGCCATCGCTATGCGTGAGCGCTCGGGAAGTTGTGCGGGTGGCA CCAGTCAGTGAAACGCTCTGCCCTTACGGCGTGCGAAGGAGGCCTCCCTT CTTCACAGACAGCAGTGTAGCGGCCGATCCCCGGGGAAGCGAGTCTACAG TCCGCGTTTCGTACCTAAACGGTGAAGCACTATTAGCCCACTCTGGAGGC AATGACGGTTGAGCTGATCTCCCGTTGAAATCGTTTTCAGGCCTTGTGCT TGTCCGTGTGGCCCCGGATATTCAGCAGCAGGAGAGAGGCAAGGCCGAAG GATAGGTAGAATGGGGAAAAAATAGAAAAAACAAGAGATAAGCGACACCC AATAAAAGCTCCGGCAATGTTCATGCGTGGAAGCGAAGCAACCATCTACA GAGGTCCTTGTGATAGTATTTTTTTCGTTTTGTTCTCTTGTTTTTTTTTT TGGCCTGGTAAGATGCAACATCGCCCTTTGATTCCGACAAGGCCTCGAAG CGCCGCCCTTAAATCTGATGGAAATGCTAGATACCTCGTCGCCAGCTGTG CTGATATGTTCTTACAAGGCTGTTTCGCCTCGACTCTTCCGCGTTGTCGC TGCCCCTATACATGTAAACTGCCTCTCTCTTCTCGTCAAAGTGTTTATCG CCCACGGGCTGCACAGTCACAGCGGACGTTGGTCGAAGGTGGCGCACCAC TACACCGAGAAGGGCTACGTCGTCTTCGCAAATGACCACATCGGCCATGG ATTGTGAGTATTCGGTTCGTAGGCCCCCCAACACCATGTGGTAAGAAATC CGCGGAGCCGCCGCCGACGTTTTTTGTTAGTAGTCACGCACCGGCATTCG GAGCACCGCGGTCCGGTAAAACGTGAACCCTCCTCCCAATTCCCAAACCG CAGGTTTATTGGGATTAGCAAGCGCTCTTACCTTTTTTTTTGGATGATCA GAATCATGGGTTAGCCACAATGTCGTTATTGAGGAGCTTCGCACGAGAGG CGTGGCGGGTCGATTTCTTGCCGTTGCTGGTTCTGCTATATTTTTTTTGT TTATTGTGCACTCGGGCCAAGGCTTCTCACGTATTTTCTAAGCTAGACTG ACGCTGCTGTGCTTAGCCGCACACCTGTCGGAGGGGGTATACCCATGTAA ACGCTGCCAGTCGTTGTAGACCATTGAGACCTCGCATCCCTACGATGCCA TAACGGAGCGATAGGTCGGGTTTTCGCCGGCCCAGGCTATGTTTCACAAG CATTCATTGGAGGCCGACCATCATCCTTGCGTTTAATGTGCCAGTACGCT ATATAAGGGTTGATTCGACAAAACCGAACGTTTCGCGTTCGGCAGGCACG ACTATGTATGCACCGCAAGGTACGTCGATCTTTGCGCCACGCTTGTACCG TACTGTACTGTACTGTACTGTACTGTACTGTACTGTACTGTACTGTACTG TACTGTACTGTACTGTACTGTACTGTACTGTACTGTACTGTATTTAGTAC AACAGACACGCGAACACGTGGCTTGGTGTGGATAGGATACATGTGGTGTC GATAAGATGACACAGAACCGAGTTACGCCTCACGTTCATGATACCCTTTG ATCGAAAAACGCCATCGTATAATGTGCGAATCCCCGCAGGACCGTTGAGG CGCTCGAAGGCGGCGGCAACAACTCCGGCATGGTTCAGGACCACTCACGG ATGACCGACGACTTCACGGAGTTCGTAGAGAAAATGGTAAGTTATTGACA TAAGCATTTTTTTCTCTCCTCTTGTGCTTCTCTGGCTTGTTTTTTCTCGC CGAAAGCCGTTTTTTTGTCTTCTTTTTTCGTCGTTTTCGTGCACGGAGGC TTCAGTTATCGGTAGGGTTGCCGAGAAGGTCGTTGGATTTCAAGTTGGTG TTACGATTTTGTGTGACGAAAGCAAAAACAACGGCAGCAGCGAACAACAT CGACGACGACGACAACAACGACGAGGACGTTTCCTTTTGTTCGCCTGCGT GTGTACTTTACGTGCTATTCTGCAGGTTGAGCAGGAAGAGGACAAAACCT TGCCGGTGATGATATTTGGACACTCCATGGGGTCCCTCGTGGCTACGGTT TCGGCGACGACGTTAACGGAGCACGCTGTCGTCGGTCCCCGGGTTAAGAA GCTCGCCCTCTCGGGTGCGTTGTTGTCGTTGTTGTCGTTGTTGTTGTTGT TGTTGTTGTTGTTGTTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTG GTGGTGGTGGTGTCGGTTTTGTTGTTGTCGTTGTTGTTGTTGCTGCTGTA GTTGTTGCTGTTTTATTTTTTGTCGTGGTCGTGGTAGTAGGGGAATTCGG CTGTCCACGACGGTGGTACACGGGCAGAGTGGAACAAGAAAAGATAAAGA AAGTGCGTCGGCACCCCGGCAGGGCAACGGGGACGACTTGACCTGGTCAG TCGCGACACAGCAGCAGTGCCTCGTGGCTGATACTACTGTACGCGTGTAC CCGGCACACCTGTTTGGGTCACTTTGGATTGTTAACTTGTCTTGCCTTGT CTTGTCTCTTGTCTTTGGTGTGTTGTGCTCGTGCAGGTTGTCCTATCGTC CCTGGACCCGGCTCCGCAAGCCCGTTCGGCCTTCGTTGCCTCTACCCGAT CAACCGGTGAGCATTCTCCTTCTCTTTGTATGTACGTGTATGTTTCCCTC ATACGCAGCTCCAGGTAAATGCTACGTTCTTGTTATTACTGTGTTCGTCG TCGTCTTTGTTGTTGGTGCTGCTGCCGCTATTGCGGTCGGCATTGTCGTC GCCCTGTCTTGACTTGCTATTATGGTGCTTTACTCTTTACTCGAGGGCTC GCTCTTGCCTGGGTCGATGACGCCATGTTTCCGCCGCCCAGTTCTTCTGA TAAATCCCAACCGGTGACTGCCGGGTGATTTACTTGCCTGGTCCGATGAA GTCCGAGTTCTCCGATGAAACACGGAAACCTCCGATGGAACCCCTAGTTC CCCGATGGAACTCCGTGTTCTCCGATGACATCCCACATTCTCCGAGATGA AACCCCGCAATCTCCGATGGAGCCCCGAGTTCTCCGATGAAACCCGTGTT CTCCGATAAAGTTCCACATTCTCCGAGATGAAACCCCGCACTCTCCGATG GAACTCCGAGTTCCCCCTATGAAAACGCCGAGTTCTCCGATGAAACCCGA ATTCTCCGACCCAGTGTTGGAGAAAAGCAAGGTTCTAAAATGTGGCCGCT GAGACTCGTGCAAGACACCCAGCACCCCCACGAAACGCTTGCCACTGCGA GCTTGTTAGCTAGCCCGGTGCCCGTTTCATGTTTCGTTGGCAGGATCATG TCTACTCCTCTACCTCGCTGGTTTGACTTTGTTGTCCTTTGGGATGATAA TGAGATTTTTTTTATTTCTGTGTTGGTTGTCTCCTCTCCGGTGTCAGAGC ACCTGGGCTGGTCCGAAGGTTATCGGGATTGTTGGCCAGGATGGACCCCG TGGGGCCCGCGGCGCCGATCGACCAAGGTACAGCAGTACGTGCCTACACA ACATTAGGCGTGGATGGCACTTCTTGTTTACATAGTACATGGTCGATCAG GGAAATATTTGATCCGCGGGGGGTCCTTCGCGGGGGCAAGTTTTGTTCTG GCTCTGCCGGAGATCAAGCGGTGAAATTTTGTATGCTACAATCGAAGATT AGATTAGATCGCACGTGGTTGTTCGTGTTCATGATGATCTATCTTCTTGC TGTAGTTGTTGCCGCTGTCACGGCTACTGCTACTGCTACTGCAATATATA GTTATGTTCGTTGTGGGTCACTTTTGTGTTGCACGTTTTGAAAAACAACA ATACACCATCGCCCGGTGGACCTCAAACCGTCCCGATGTCCGGGATAACC GCTGTAACTGTTTTGTTTGTTGGTGCTGCAGGATCGCTGTCATCACCATA CCGATATCCGGGTAACCGTGTCTCTGCGTTTTGCTTTTTTGGTGCTGCAG GATCGCTATCAAAACGACCCCGATGTCTCTGCTTTTTGCTTTTTTGGTGC TGAAGGATCGCTATCAAAACCATACCAATATCCGGGTAACCGTGTCTCTG CTTTTTTTTCGTGGTGCTGAAGGATCGCTATCAAACGACCCCGATGTCTC TGCTTTTTGCTTTTTTGGTGCTGCAGGATCGCTGTCAAACGACGGGGTAA TTGGTGTGACTCTGTTTTTGTTTTTTCGGTGCTTGCAGGAGCGTTGTCAA GCGACCCTGAGGTTGCGCCGGAGGCTGCCGTGGACCCGCTCATGGTGAAG GGCAGCGTGCGAAACAAGACGGCCTTCGAGGTCCTCAAGCTCGTGCAAGT CGCCAAGCAGAGCGCCTGCAAGGTTCGTTTCCACACGCAAACAGCATGAT CTACAGACAGATACGTTGCAGTTGCCGTGCTTGTTTCGCCAAAGGGAAAC GTGTCAAGCTCGTTTCTACGCACGAAAGAACTATGTTAGTTGTCGTTGTT TCGCCAGCGCAGAGAATTTGGTTTTTTGCAACGTACCCCTATATTTTCAG CGTGGGAGGGGGGGGGTCGGACATGTCGGTTGAAGTTGTGTCTTCTTCAC CGACAGAAAGCATGGTAATTTCCGTGCAATTTTTGAAACAAGCACACCTT ACCTTTGTAACTTTTTTACGTCATGCCAAAGGAATCGACCCGTGCCTCAA ACGTTGTGGTGTGAGCATGACTCTCTAAGAATATGATCGCATCCACACCG TACACCGTACACCCTTGTTTTGTGTTGTACATGTCTGTCTGTCTGTTCGA GGCGCCGCCACACTCACTCAGCGTTTGGTGTTGAGTCTTCTTGATACTGC CTTATCCCATGAACGGCCGATGAAGGAAATATATCGCATTTTATACACGA ACAGAGTGTATGCGTAAGGACACACACAACACTACGTACTGCCAGGCGGC CTCCGTCGGTTCTTTCGGGGGGGGCGCAGTTGGACTCCCAACCGCGTATC TACGCTTCATACACACATAATGCCCAGATCGGGTATCGTACCCAAATACC ACAGACTCTTGTTGCCGGATGCCGATCGGTCGAGATCACGGACGGGTGCG GAGCGTACATTGACGCGCGCGTGCTTGTGCCGCGGAGGTACAGAATTACT GAATCGTTTTTCGGCACGATATTCTTGACTTGTCGGGACCCCCCTGGGCC CCCACCTATGCATACAGTATCTGCTAGTCGCATTCACTCTGTGGCGCCAT TGCCCTCCCCCCGGCTCGCGCACCGGAGCCCCCCCCCCGTGCCCTCCCCC GTGGGGTATAGAGGCAGGGATATCCAACCTTTCGACGCTCCCTGCTTGAG GATACCACACCCCTCCTGTCGGTTTGTCTTGTCTTCGCTATGCACGCACA CCAATCTTGTGCGTGTGCTTGTATTCAAGGCGAATTGCGACAATTGCGTG GTACGTACGTACGCGTGCTTCGTCCTACAACGTGTAGCTGTGCGTTGAAT TTTAATCGACGACCACGCTAGCCGGCTGGCTAATATAATGACATCAGTCT CAATGCGGCTAAAAATATATATTGGTTATTGAGGCCATGATTGATCTGGG GCCCCGTGAGGAGGCGTCATGGGAAGGCTAAGCTGCTTTTCCGGATTAAA AACAGATACCCGTCTATGTGTGTCTAACCACGTGCGTTCGAACCCCCCTC CCCCCCTCCCAAAAAAAAAAAAGGTTTCGGTGCCGACCCTCCTGATTCAT GGGGGCGACGACGACATAGCCTACCCTTCGGGGGCCGAAGAGATGAAGTC TTTGCTCACGGCCAGCAGCTCTGTCGACCTCGAGGTA
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Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig8664:148..6034+

>mRNA_E_fasciculatus_S2_contig8664.16777.1 ID=mRNA_E_fasciculatus_S2_contig8664.16777.1|Name=mRNA_E_fasciculatus_S2_contig8664.16777.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=816bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig8664:148..6034+ (Ectocarpus fasciculatus EfasUO2)
ATGCTCGGTAGGCGAGGGGGGAGCGTCTGGTACAGGAGGTGGGCTCCTCA
GTCCAAGGCCATCGCTATGCTGTTTATCGCCCACGGGCTGCACAGTCACA
GCGGACGTTGGTCGAAGGTGGCGCACCACTACACCGAGAAGGGCTACGTC
GTCTTCGCAAATGACCACATCGGCCATGGATTGACCGTTGAGGCGCTCGA
AGGCGGCGGCAACAACTCCGGCATGGTTCAGGACCACTCACGGATGACCG
ACGACTTCACGGAGTTCGTAGAGAAAATGGTTGAGCAGGAAGAGGACAAA
ACCTTGCCGGTGATGATATTTGGACACTCCATGGGGTCCCTCGTGGCTAC
GGTTTCGGCGACGACGTTAACGGAGCACGCTGTCGTCGGTCCCCGGGTTA
AGAAGCTCGCCCTCTCGGGTTGTCCTATCGTCCCTGGACCCGGCTCCGCA
AGCCCGTTCGGCCTTCGTTGCCTCTACCCGATCAACCGAGCACCTGGGCT
GGTCCGAAGGTTATCGGGATTGTTGGCCAGGATGGACCCCGTGGGGCCCG
CGGCGCCGATCGACCAAGGAGCGTTGTCAAGCGACCCTGAGGTTGCGCCG
GAGGCTGCCGTGGACCCGCTCATGGTGAAGGGCAGCGTGCGAAACAAGAC
GGCCTTCGAGGTCCTCAAGCTCGTGCAAGTCGCCAAGCAGAGCGCCTGCA
AGGTTTCGGTGCCGACCCTCCTGATTCATGGGGGCGACGACGACATAGCC
TACCCTTCGGGGGCCGAAGAGATGAAGTCTTTGCTCACGGCCAGCAGCTC
TGTCGACCTCGAGGTA
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