mRNA_E_fasciculatus_S2_contig8664.16777.1 (mRNA) Ectocarpus fasciculatus EfasUO2
|
Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig8664.16777.1 vs.
Match: Hydrolase_4 (domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KFL3_9PHAE) HSP 1 Score: 490 bits (1262), Expect = 3.570e-173 Identity = 250/269 (92.94%), Postives = 258/269 (95.91%), Query Frame = 1
Query: 10 RRGGSVWYRRWAPQSKAIAMLFIAHGLHSHSGRWSKVAHHYTEKGYVVFANDHIGHGLTVEALEGGGNNSGMVQDHSRMTDDFTEFVEKMVEQEEDKTLPVMIFGHSMGSLVATVSATTLTEHAVVGPRVKKLALSGCPIVPGPGSASPFGLRCLYPINRAPGLVRRLSGLLARMDPVGPAAPIDQGALSSDPEVAPEAAVDPLMVKGSVRNKTAFEVLKLVQVAKQSACKVSVPTLLIHGGDDDIAYPSGAEEMKSLLTASSSVDLEV 816
RRGGSVWYRRWAPQSKAIAMLFIAHGLHSHSGRWSK+AH+YTEKGYVVFANDHIGHGLTV+A+EGGG NSGMV+DHSRMTDDFTEFV KMV QEEDKTLPVMI GHSMGSLVATVSAT LTEHAVVGPRVKKLALSGCPIVPGPGSASPFGLRCLYPINRA GLVRRLSGLLARMDP GPAAP+DQG+LSSDPEV EAAVDPLMVKGSVRNKTAFEVLKLVQVAKQSACKVSVP LLIHGGDDD+AYPSGAEEMKSLLTASSSV LEV
Sbjct: 46 RRGGSVWYRRWAPQSKAIAMLFIAHGLHSHSGRWSKLAHYYTEKGYVVFANDHIGHGLTVQAVEGGGTNSGMVEDHSRMTDDFTEFVVKMVGQEEDKTLPVMILGHSMGSLVATVSATKLTEHAVVGPRVKKLALSGCPIVPGPGSASPFGLRCLYPINRASGLVRRLSGLLARMDPGGPAAPLDQGSLSSDPEVKLEAAVDPLMVKGSVRNKTAFEVLKLVQVAKQSACKVSVPVLLIHGGDDDMAYPSGAEEMKSLLTASSSVALEV 314
BLAST of mRNA_E_fasciculatus_S2_contig8664.16777.1 vs.
Match: Putative (lysophospholipase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8A9_9STRA) HSP 1 Score: 210 bits (535), Expect = 3.040e-63 Identity = 115/261 (44.06%), Postives = 159/261 (60.92%), Query Frame = 1
Query: 16 GGSVWYRRWAPQSKAIAMLFIAHGLHSHSGRWSKVAHHYTEKGYVVFANDHIGHGLTVEALEGGGNNSGMVQDHSRMTDDFTEFVEKMVEQEEDKTLPVMIFGHSMGSLVATVSATTL-TEHAVVGPRVKKLALSGCPIVPGPGSASPFGLRCLYPINRAPGLVRRLSGLLARMDPVGPAAPIDQGALSSDPEVAPEAAVDPLMVKGSVRNKTAFEVLKLVQVAKQSACKVSVPTLLIHGGDDDIAYPSGAEEMKSLLTAS 795
G ++ +R W P + +FI HGLH HSGR+S+VA + KGY V+ANDH GHGL+ G+N G V D+ M+D EFV+ M++ + + PV + HSMG++V V+ L E A + R+K +A +GC + PGPGSASP GL C + + ++ GL+ L A DP GP APID LS DPEVA D +G ++NKTA EV+KL ++ +++P LL+HGGDD I YP G+EEM SLL +S
Sbjct: 27 GDAIGFRTWTPAGEVRGTVFIVHGLHEHSGRYSRVAEYLNGKGYAVYANDHAGHGLSA------GDNMGFVSDYRHMSDAVAEFVKTMLDGQPLER-PVYMLCHSMGAMVGAVALAKLKAEDAALYGRIKGVAFTGCALSPGPGSASPLGLTCCFCLTKSKGLLHCLVACFATADPHGPNAPIDDACLSHDPEVAARLKKDFYHFRGRIKNKTAHEVVKLSDKTREVLPTLTLPCLLMHGGDDTICYPDGSEEMLSLLGSS 280
BLAST of mRNA_E_fasciculatus_S2_contig8664.16777.1 vs.
Match: Hypothetical (protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UUJ9_HETAK) HSP 1 Score: 154 bits (389), Expect = 1.590e-41 Identity = 91/254 (35.83%), Postives = 136/254 (53.54%), Query Frame = 1
Query: 10 RRGGSVWYRRWAPQSKAIAMLFIAHGLHSHSGRWSKVAHHYTEKGYVVFANDHIGHGLTVEALEGGGNNSGMVQDHSRMTDDFTEFVEKMVEQEEDKTLPVMIFGHSMGSLVATVSATTLTE-HAVVGPRVKKLALSGCPIVPGPGSASPFGLRCLYPINRAPGLVRRLSGLLARMDPVGPAAPIDQGALSSDPEVAPEAAVDPLMVKGSVRNKTAFEVLKLVQVAKQSACKVSVPTLLIHGGDDDIAYPSGAE 768
+ G + YR W P +K A++F+ HGLH H GR+S +H T +G+ VFA+DHI HG + + + G++ + DD +F + + +Q + LPV++ GHSMGS++A + L + A V RVK +SG I G +ASP GL+ LY +N ++R L+ A DP GP AP+ LS D E D L+ G RNKTA E+ K + + + P ++HGG+D I P A+
Sbjct: 25 QNGDLIGYRSWIPINKPRALVFLVHGLHEHGGRYSGFSHVLTAQGFAVFAHDHISHGRSRMIQD----SMGLIPSMDEVIDDAVQFWKSIAQQYAE--LPVLVMGHSMGSIIAGNAMVALKDADADVAARVKGAVISGASIKNGVNAASPLGLKWLYCLNSCGPMMRCLTSGFAAADPTGPGAPLFDDFLSHDIEYVAARRRDELVYHGWTRNKTAAEIYKGINSLHSNFTRFDYPVYIVHGGEDSICLPVSAQ 272
BLAST of mRNA_E_fasciculatus_S2_contig8664.16777.1 vs.
Match: Hydrolase_4 (domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9DAP3_9STRA) HSP 1 Score: 146 bits (368), Expect = 5.610e-38 Identity = 84/252 (33.33%), Postives = 141/252 (55.95%), Query Frame = 1
Query: 16 GGSVWYRRWAPQS--KAIAMLFIAHGLHSHSGRWSKVAHHYTEKGYVVFANDHIGHGLTVEALEGGGNNSGMVQDHSRMTDDFTEFVEKMVEQEEDKTLPVMIFGHSMGSLVATVSATTLTEHAVVGPRVKKLALSGCPIVPGPGSASPFGLRCLYPINRAPGLVRRLSGLLARMDPVGPAAPIDQGALSSDPEVAPEAAVDPLMVKGSVRNKTAFEVLKLVQVAKQSACKVSVPTLLIHGGDDDIAYPSGA 765
GG ++ R W P+ + +F+AHG++ H GR+ +AH T KG+ VF +DH GHGL+ G + G V+D + + D + + +++ + +P I GHSMG++VA +A L+ A + + SGC +VPGP +ASPFG+R L+ + ++ + GL+AR+DP GP AP+ + L+ D + DPL +G + N+T ++L+ + K+ ++P L +HG D + YP G+
Sbjct: 35 GGRLFTRTWIPKDCVTPASCIFLAHGVNEHIGRYCDLAHSLTAKGHKVFGHDHWGHGLS-------GGHRGDVEDLNYLIGDLKQLI--AAQRDNHRGVPFFIIGHSMGTIVAFHAALELSSEAPS--LLHGVIFSGCALVPGPAAASPFGVRFLFCLTKSEWASSAIGGLMARLDPRGPLAPVVESELTRDTKELEALQRDPLHNRGPLLNRTGNQLLQKCREMKERLPHFTLPFLAMHGAADTVTYPEGS 275
BLAST of mRNA_E_fasciculatus_S2_contig8664.16777.1 vs.
Match: Alpha-beta (hydrolase superfamily lysophospholipase n=2 Tax=Nocardia mexicana TaxID=279262 RepID=A0A370H203_9NOCA) HSP 1 Score: 112 bits (280), Expect = 6.490e-26 Identity = 79/252 (31.35%), Postives = 121/252 (48.02%), Query Frame = 1
Query: 13 RGGSVWYRRWAPQSKAIAMLFIAHGLHSHSGRWSKVAHHYTEKGYVVFANDHIGHGLTVEALEGGGNNSGMVQDHSRMTDDFTEFVEKMVEQEEDKTLPVMIFGHSMGSLVATVSATTLTEHAVVGPRVKKLALSGCPIVPGPGSASPFGLRCLYPINRAPGLVRRLSGLLARMDPVGPAAPIDQGALSSDPEVAPEAAVDPLMVKGSVRNKTAFEVLKLVQVAKQSACKVSVPTLLIHGGDDDIAYPSGAE 768
RGG +++R W P+ + ++ + HG+ HSGR+ V G+ V+A DHIGHG + + G + +RM + TE LP + GHSMGSLV T+ T V G +A+S P+V G+ P+ R L+ +L+R P +D A+S DPEV DPL+ G + +T E+L+ + + +++VPTL++HGG D IA PS A+
Sbjct: 12 RGGGIFWRAWVPEGEVRGVVVLVHGVAEHSGRYEHVGERLARSGFGVYALDHIGHGQSAGGQANIDSMDGAADNVARMLEIATE---------RHPGLPRFVVGHSMGSLV-TLYLATRAPLDVAG-----IAVSAPPLVIEAGN----------PVQRL------LAPVLSRWAPKLGVLQLDSSAISRDPEVVRAYDADPLVFSGKLPARTGAEILRATETVVRRLPRLTVPTLVLHGGADTIAAPSSAD 232
BLAST of mRNA_E_fasciculatus_S2_contig8664.16777.1 vs.
Match: Lipase (n=3 Tax=Sphingomonadaceae TaxID=41297 RepID=A0A2D3RIX7_9SPHN) HSP 1 Score: 111 bits (278), Expect = 1.320e-25 Identity = 79/261 (30.27%), Postives = 127/261 (48.66%), Query Frame = 1
Query: 16 GGSVWYRRWAPQSKAIAMLFIAHGLHSHSGRWSKVAHHYTEKGYVVFANDHIGHGLTVEALEGGGNNSGMVQDHSRMTDDFTEFVEKMVEQEEDKTLPVMIFGHSMGSLVATVSAT-TLTEHAVVGPRVKKLALSGCPIVPGPGSASPFGLRCLYPINRAPGLVRRLSGLLARMDPVGPAAPIDQGALSSDPEVAPEAAVDPLMVKGSVRNKTAFEVLKLVQVAKQSACKVSVPTLLIHGGDDDIAYPSGAEEMKSLLTAS 795
G +++++W P + A++ + HG HSGR+ A H KGY VFA DH GHG + +G V D S D + + + D LPVM+ GHSMG L+ SAT LTE + C ++ GP + ++ +SG L+R P +D +S DPEV + DPL+ G + + A E+L + + +++A ++S+P LL+HGG D +A +G+E + +++S
Sbjct: 11 GAKIFWQKWLPDNDPKAIILLVHGYAEHSGRYQYFAEHCVGKGYAVFALDHWGHGKS-------DGTAGFVPDFSVFRDGVDRLLAQAKQDLSD--LPVMLVGHSMGGLI---SATYLLTEQG---------NFAAC-VLSGPA---------IQAAEEPSAALKAISGFLSRFFPKLGVLELDPNGVSRDPEVVADYLADPLVYNGKMGARLAAEMLANMTMVQENAGRISLPMLLLHGGQDSLAGVAGSEFLVRHISSS 240
BLAST of mRNA_E_fasciculatus_S2_contig8664.16777.1 vs.
Match: Putative (monoacylglycerol lipase n=2 Tax=Gordonia sihwensis TaxID=173559 RepID=L7LPT4_9ACTN) HSP 1 Score: 107 bits (267), Expect = 5.380e-24 Identity = 80/254 (31.50%), Postives = 117/254 (46.06%), Query Frame = 1
Query: 1 MLGRRGGSVWYRRWAPQSKAIAMLFIAHGLHSHSGRWSKVAHHYTEKGYVVFANDHIGHGLTVEALEGGGNNSGMVQDHSRMTDDFTEFVEKMVEQEEDKTLPVMIFGHSMGSLVATVSATTLTEHAVVGPRVKKLALSGCPIVPGPGSASPFGLRCLYPINRAPGLVRRLSGLLARMDPVGPAAPIDQGALSSDPEVAPEAAVDPLMVKGSVRNKTAFEVLKLVQVAKQSACKVSVPTLLIHGGDDDIAYPSG 762
+ G G S+ Y P+S A+ ++ I+HGL H+GR+ VA T+ GYVV A DH GHG + GG G+ DFT + ++EQ + P + GHSMG +A A EH V + L LSG +VPG + PG + RL+ ++ R+ P PA + A+S DP V DPL+ G + ++ + ++ PTL +HGG D +A P G
Sbjct: 8 VAGVHGVSIVYDVHRPESGAVGVVIISHGLGEHAGRYRHVAQRLTDLGYVVVAPDHAGHGRS------GGRRLGVTDFR-----DFTSDLHTVIEQTDRGDGPTFLIGHSMGGAIALDYAL---EHPGV---LDGLVLSGAALVPG---------------DDLPGFMVRLAPVIGRLVPRLPATALPASAVSRDPNVVAAYEADPLVWHGKIPAGLGGALISTMATFPDRLPSLTTPTLALHGGGDRLANPEG 229
BLAST of mRNA_E_fasciculatus_S2_contig8664.16777.1 vs.
Match: Phospholipase (ytpA n=14 Tax=Nocardiaceae TaxID=85025 RepID=A0A378WNY6_9NOCA) HSP 1 Score: 107 bits (266), Expect = 6.940e-24 Identity = 81/260 (31.15%), Postives = 129/260 (49.62%), Query Frame = 1
Query: 13 RGGSVWYRRWAPQSKAIAMLFIAHGLHSHSGRWSKVAHHYTEKGYVVFANDHIGHGLTVEALEGGGNNSGMVQDHSRMTDDFTEFVEKMVEQEEDKTLPVMIFGHSMGSLVATVSATTLTEHAVVGPRVKKLALSGCPIVPGPGSASPFGLRCLYPINRAPGLVRRLSGLLARMDPVGPAAPIDQGALSSDPEVAPEAAVDPLMVKGSVRNKTAFEVLKLVQVAKQSACKVSVPTLLIHGGDDDIAYPSGAEEMKSLLTA 792
RGG V++R W P +A A++ + HG+ HSGR+ V + G+ V+A DHIGHG + GGG ++ ++ D+ ++ + + LP + GHSMGSL+ T+ T V G +A+S P+V G+ P+ R L+ L+R P +D +S DPEV DPL+ +G + +TA E+L+ + VPTL++HGG+D +A P GA+ +++ TA
Sbjct: 12 RGGQVFWRAWLPD-RARAVVVLVHGVAEHSGRYDHVGKRLADSGFAVYAFDHIGHGRS-----GGGRSN--IESIDAAADNVNTMLD--IASAKHPGLPRFVLGHSMGSLI-TLYLATRAPLEVAG-----IAVSAPPVVIEAGN----------PVQRL------LAPALSRWVPNLGVLQLDSTQISRDPEVVRAYDQDPLVYRGKLPARTATEILRGADFVLAHLDALRVPTLVLHGGEDALAAPVGADRIEAGATA 239
BLAST of mRNA_E_fasciculatus_S2_contig8664.16777.1 vs.
Match: Alpha/beta (hydrolase n=1 Tax=Nocardia veterana TaxID=132249 RepID=A0A7X6M2Y9_9NOCA) HSP 1 Score: 105 bits (263), Expect = 1.880e-23 Identity = 79/256 (30.86%), Postives = 124/256 (48.44%), Query Frame = 1
Query: 13 RGGSVWYRRWAPQSKAIAMLFIAHGLHSHSGRWSKVAHHYTEKGYVVFANDHIGHGLTVEALEGGGNNSGMVQDHSRMTDDFTEFVEKMVEQEEDKTLPVMIFGHSMGSLVATVSATTLTEHAVVGPRVKKLALSGCPIVPGPGSASPFGLRCLYPINRAPGLVRRLSGLLARMDPVGPAAPIDQGALSSDPEVAPEAAVDPLMVKGSVRNKTAFEVLKLVQVAKQSACKVSVPTLLIHGGDDDIAYPSGAEEMKS 780
RGG V++R W P + A++ + HG+ HSGR+ V + G+ V+A DHIGHG + GG N ++ D+ +E + +P + GHSMGSL+ T+ T V G +A+S P+V G+ L R L+ L+R P +D A+S DPEV DPL+ +G + +TA E+L+ + + VPTL++HGG D++A P GA+ +++
Sbjct: 12 RGGRVFWRAWLPD-RVRAVVVLVHGVAEHSGRYDHVGKRLADSGFAVYAFDHIGHGRSA----GGQAN---IESIDAAADNVNTMLE--IASATYPAVPRFVLGHSMGSLI-TLYLATRAPLDVAG-----IAVSAPPVVIEAGNP----------------LQRLLAPALSRWAPKLGVLQLDSSAISRDPEVVRAYDRDPLVYRGKLPARTAAEILRGAEFVLGHLAALQVPTLVLHGGADELAAPEGADRIEA 235
BLAST of mRNA_E_fasciculatus_S2_contig8664.16777.1 vs.
Match: Lysophospholipase (n=1 Tax=Gordonia iterans TaxID=1004901 RepID=A0A2S0KE05_9ACTN) HSP 1 Score: 103 bits (256), Expect = 1.780e-22 Identity = 78/254 (30.71%), Postives = 116/254 (45.67%), Query Frame = 1
Query: 1 MLGRRGGSVWYRRWAPQSKAIAMLFIAHGLHSHSGRWSKVAHHYTEKGYVVFANDHIGHGLTVEALEGGGNNSGMVQDHSRMTDDFTEFVEKMVEQEEDKTLPVMIFGHSMGSLVATVSATTLTEHAVVGPRVKKLALSGCPIVPGPGSASPFGLRCLYPINRAPGLVRRLSGLLARMDPVGPAAPIDQGALSSDPEVAPEAAVDPLMVKGSVRNKTAFEVLKLVQVAKQSACKVSVPTLLIHGGDDDIAYPSG 762
++GRRG ++ Y P S+A+ ++ + HGL H+GR+ V T GYVV A DH GHG + G D R DF V+++++ E LP+ + GHSMG +A A + + L LSG +VPG + P ++ L+ +L RM P PA + A+S DP V DPL+ G + ++ + +SVPTL +HGG D +A P G
Sbjct: 8 LVGRRGRTIVYDVHRPDSEAVGVVALVHGLGEHAGRYEHVIARLTGAGYVVVAPDHAGHGRS----------DGTPAD-VREFGDFVADVKRVIDSVERAGLPLYVIGHSMGGAIALSYALDHPDG------LAGLVLSGPAVVPG---------------DDLPPVMIALAPVLGRMVPRLPATALSASAVSRDPAVVAAYEADPLVYHGKIPAGLGGTLIAEMTTFPDRLPSLSVPTLCLHGGQDVLANPEG 229 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig8664.16777.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig8664.16777.1 >prot_E_fasciculatus_S2_contig8664.16777.1 ID=prot_E_fasciculatus_S2_contig8664.16777.1|Name=mRNA_E_fasciculatus_S2_contig8664.16777.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=272bp MLGRRGGSVWYRRWAPQSKAIAMLFIAHGLHSHSGRWSKVAHHYTEKGYVback to top mRNA from alignment at E_fasciculatus_S2_contig8664:148..6034+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig8664.16777.1 ID=mRNA_E_fasciculatus_S2_contig8664.16777.1|Name=mRNA_E_fasciculatus_S2_contig8664.16777.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=5887bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig8664:148..6034+ (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig8664:148..6034+ >mRNA_E_fasciculatus_S2_contig8664.16777.1 ID=mRNA_E_fasciculatus_S2_contig8664.16777.1|Name=mRNA_E_fasciculatus_S2_contig8664.16777.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=816bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig8664:148..6034+ (Ectocarpus fasciculatus EfasUO2)back to top |