mRNA_E_fasciculatus_S2_contig860.16724.1 (mRNA) Ectocarpus fasciculatus EfasUO2

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E_fasciculatus_S2_contig860.16724.1
Unique NamemRNA_E_fasciculatus_S2_contig860.16724.1
TypemRNA
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Homology
BLAST of mRNA_E_fasciculatus_S2_contig860.16724.1 vs.
Match: Putative (GPI-anchor transamidase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FTP3_ECTSI)

HSP 1 Score: 668 bits (1724), Expect = 1.510e-241
Identity = 342/361 (94.74%), Postives = 347/361 (96.12%), Query Frame = 1
Query:   49 MKKRTRSGVSLLVVRSAEVRKTYRAWFLSISLAALLVCAAPLFSALGVTASTATAAGAKGASSRHNNNWAVLVCTSRFWFNYRHVANTLSVYHTVRRLGIPDSNIVLMLADDMPCNARNPFPGGVYNSKDHELNLYEGDVEVDYRGEEVSVESFLRLLTGRTLPGTPPSKTLATDEHSNVLIYMNGHGGDQFLKFHDMEEVSSHDLGGALREMELKKRYHRVLFMVDTCQAMTLFEEIDSKDVICIGSSVRGENSYARGSDATIGLSLMDRFTSAMLDFFQAAITKGEDVTANRVRGFSSENSAPLNLRDDVTLGALMHSMRPKSLLSSPTVELKGWTGPPLDKHCVGFPSAVAVLCARTR 1131
            MKKR  SGVSLLVVRSAEVRKTYRAWFLSISLA LL+C+ PLFSA+GVTASTA  AGAKGASSRHNNNWAVLVCTSRFWFNYRHVANTLSVYHTVRRLGIPDSNIVLMLADDMPCNARNPFPGGVYNSKDHELNLYEGDVEVDYRGEEVSVESFLRLLTGRTLPGTPPSKTLATDEHSNVLIYMNGHGGDQFLKFHDMEEVSSHDLGGALREMELKKRYHRVLFMVDTCQAMTLFEEIDSKDVICIGSSVRGENSYARGSDATIGLSLMDRFTSAMLDFFQAAITKGEDVTANRVRGFSS NSAPLNLR+DVTLGALMHSMRPKSLLSSPTVELKGWTGPPL+   VGF  AVA L ARTR
Sbjct:    1 MKKRAGSGVSLLVVRSAEVRKTYRAWFLSISLAVLLLCSVPLFSAVGVTASTA--AGAKGASSRHNNNWAVLVCTSRFWFNYRHVANTLSVYHTVRRLGIPDSNIVLMLADDMPCNARNPFPGGVYNSKDHELNLYEGDVEVDYRGEEVSVESFLRLLTGRTLPGTPPSKTLATDEHSNVLIYMNGHGGDQFLKFHDMEEVSSHDLGGALREMELKKRYHRVLFMVDTCQAMTLFEEIDSKDVICIGSSVRGENSYARGSDATIGLSLMDRFTSAMLDFFQAAITKGEDVTANRVRGFSSGNSAPLNLRNDVTLGALMHSMRPKSLLSSPTVELKGWTGPPLNMDGVGFAPAVATLRARTR 359          
BLAST of mRNA_E_fasciculatus_S2_contig860.16724.1 vs.
Match: Hypothetical (protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V326_9STRA)

HSP 1 Score: 326 bits (836), Expect = 3.440e-107
Identity = 160/271 (59.04%), Postives = 201/271 (74.17%), Query Frame = 1
Query:  238 RHNNNWAVLVCTSRFWFNYRHVANTLSVYHTVRRLGIPDSNIVLMLADDMPCNARNPFPGGVYNSKDHELNLYEGDVEVDYRGEEVSVESFLRLLTGRTLPGTPPSKTLATDEHSNVLIYMNGHGGDQFLKFHDMEEVSSHDLGGALREMELKKRYHRVLFMVDTCQAMTLFEEIDSKDVICIGSSVRGENSYARGSDATIGLSLMDRFTSAMLDFFQAAITKGEDVTANRVRGFSSENSAPLNLRDDVTLGALMHSMRPKSLLSSPTVEL 1050
            RHNNNW VLV TSRFWFNYRH+ANTLS+YHTV+RLGIPDS I+LMLADDMPCNARNP+PG +YN+KD +LNLY   VEVDYRG +V+VE+FLRLLTGRT PG P SK L TDEHSN+LI+M+GHGGD FLKF D EEVSSHD+  A+ EM +K RYH +L +VDTCQA TL ++I S +V+ IGSS  GENSYA  SD ++G++++DRFT A LDFF+              R F+++     +     +L +L+    P  L S+P +++
Sbjct:   30 RHNNNWVVLVSTSRFWFNYRHIANTLSIYHTVKRLGIPDSQIILMLADDMPCNARNPYPGEIYNNKDRKLNLYGDVVEVDYRGTDVTVENFLRLLTGRTKPGLPFSKLLNTDEHSNILIFMSGHGGDGFLKFQDSEEVSSHDIADAIEEMNIKGRYHEILLIVDTCQAGTLGQQIYSPNVVSIGSSKLGENSYAHHSDHSLGVAVIDRFTEATLDFFE--------------RRFNADGVPRSSNSKSTSLASLISFYDPVKLKSTPDIQV 286          
BLAST of mRNA_E_fasciculatus_S2_contig860.16724.1 vs.
Match: Uncharacterized (protein (Fragment) n=1 Tax=Genlisea aurea TaxID=192259 RepID=S8DYY6_9LAMI)

HSP 1 Score: 298 bits (762), Expect = 3.230e-96
Identity = 147/268 (54.85%), Postives = 188/268 (70.15%), Query Frame = 1
Query:  232 SSRHNNNWAVLVCTSRFWFNYRHVANTLSVYHTVRRLGIPDSNIVLMLADDMPCNARNPFPGGVYNSKDHELNLYEGDVEVDYRGEEVSVESFLRLLTGRTLPGTPPSKTLATDEHSNVLIYMNGHGGDQFLKFHDMEEVSSHDLGGALREMELKKRYHRVLFMVDTCQAMTLFEEIDSKDVICIGSSVRGENSYARGSDATIGLSLMDRFTSAMLDFFQAAITKGEDVTANRVRGFSSENSAPLNLRDDVTLGALMHSMRPKSLLSS 1035
            S+ H NNWAVLVCTSRFWFNYRH+ANTLS+Y TV+RLGIPD  I+LMLADDM CNARN +P  V+N+++H LNLY  +VEVDYRG EV+VE+FLR+LTGR     P SK L +DE S++L+YM GHGGD+FLKF D EE+ SHDL  A+++M+ KKR+  +L M DTCQA TLF ++ S  V+ IGSS +GENSY+   D  +G+S++DRFT   L FF+                        LN+ DD +LG+L  S  PK L+S+
Sbjct:   24 SATHTNNWAVLVCTSRFWFNYRHMANTLSLYRTVKRLGIPDERIILMLADDMACNARNKYPAQVFNNENHRLNLYGDNVEVDYRGYEVTVENFLRVLTGRHETAVPRSKRLLSDEGSHILVYMTGHGGDEFLKFQDSEELQSHDLADAVKQMKEKKRFKELLIMADTCQAATLFNQLQSPGVLTIGSSKKGENSYSHHLDPDVGVSVVDRFTFYTLAFFER-----------------------LNIYDDASLGSLFKSYNPKLLMST 268          
BLAST of mRNA_E_fasciculatus_S2_contig860.16724.1 vs.
Match: GPI-anchor (transamidase family protein n=1 Tax=Rhizophora mucronata TaxID=61149 RepID=A0A2P2JFN2_RHIMU)

HSP 1 Score: 297 bits (760), Expect = 4.360e-95
Identity = 145/265 (54.72%), Postives = 189/265 (71.32%), Query Frame = 1
Query:  241 HNNNWAVLVCTSRFWFNYRHVANTLSVYHTVRRLGIPDSNIVLMLADDMPCNARNPFPGGVYNSKDHELNLYEGDVEVDYRGEEVSVESFLRLLTGRTLPGTPPSKTLATDEHSNVLIYMNGHGGDQFLKFHDMEEVSSHDLGGALREMELKKRYHRVLFMVDTCQAMTLFEEIDSKDVICIGSSVRGENSYARGSDATIGLSLMDRFTSAMLDFFQAAITKGEDVTANRVRGFSSENSAPLNLRDDVTLGALMHSMRPKSLLSS 1035
            H NNWAVLVCTSRFWFNYRH+ANTLS+Y TV+RLGIPD  I+LMLADDM CN+RN FP  V+N+++H LNLY  +VEVDYRG EV+VE+F R+LTGR  P  P SK L +DE S+VL+YM GHGGD+FLKF D EE+ SHDL  A+R+M+ K R+  +L MVDTCQA TLF+++ S  V+ IGSS++GENSY+   D+ +G+S++DRFT   L FF+                        LN+ D+ +L +L +S  P +L+S+
Sbjct:    2 HTNNWAVLVCTSRFWFNYRHMANTLSLYRTVKRLGIPDERIILMLADDMACNSRNKFPAQVFNNENHRLNLYGDNVEVDYRGYEVTVENFFRVLTGRHAPAVPRSKRLLSDEGSHVLLYMTGHGGDEFLKFQDSEELQSHDLADAVRQMKEKHRFKELLIMVDTCQAATLFDQLHSPGVLAIGSSMKGENSYSHHLDSDVGVSVVDRFTFYTLAFFER-----------------------LNMYDNASLSSLFNSYDPNTLMST 243          
BLAST of mRNA_E_fasciculatus_S2_contig860.16724.1 vs.
Match: Hypothetical (protein n=2 Tax=Spirodela intermedia TaxID=51605 RepID=A0A7I8K0I5_SPIIN)

HSP 1 Score: 298 bits (762), Expect = 6.720e-95
Identity = 148/268 (55.22%), Postives = 190/268 (70.90%), Query Frame = 1
Query:  232 SSRHNNNWAVLVCTSRFWFNYRHVANTLSVYHTVRRLGIPDSNIVLMLADDMPCNARNPFPGGVYNSKDHELNLYEGDVEVDYRGEEVSVESFLRLLTGRTLPGTPPSKTLATDEHSNVLIYMNGHGGDQFLKFHDMEEVSSHDLGGALREMELKKRYHRVLFMVDTCQAMTLFEEIDSKDVICIGSSVRGENSYARGSDATIGLSLMDRFTSAMLDFFQAAITKGEDVTANRVRGFSSENSAPLNLRDDVTLGALMHSMRPKSLLSS 1035
            S+ HNNNWAVLVCTSRFWFNYRH+ANTLS+Y TV+RLGIPD  I+LMLADDM CNARN +P  V+N+++H++NLY  +VEVDYRG EV+VE+FLR+LTGR     P SK L +DE S++L+YM GHGGDQFLKF D EE+ SHDL  A+++M  K+R+  +L MVDTCQA TLF + DS  V+ IGSSV+GENSY+   D+ IG+S++DRFT   L FF+                        LN+  + +L +L +S  P  LLS+
Sbjct:   34 SAMHNNNWAVLVCTSRFWFNYRHMANTLSLYRTVKRLGIPDERIILMLADDMACNARNNYPAQVFNNENHQINLYGDNVEVDYRGYEVTVENFLRVLTGRHETAVPRSKRLLSDEGSHILLYMTGHGGDQFLKFQDSEELQSHDLADAVKQMSEKQRFKELLIMVDTCQAATLFSQFDSPGVLSIGSSVKGENSYSHHLDSDIGVSVVDRFTFYTLAFFEK-----------------------LNIYSNASLSSLFNSYNPNWLLST 278          
BLAST of mRNA_E_fasciculatus_S2_contig860.16724.1 vs.
Match: putative (GPI-anchor transamidase n=2 Tax=Impatiens glandulifera TaxID=253017 RepID=UPI001FB0F723)

HSP 1 Score: 298 bits (762), Expect = 9.430e-95
Identity = 149/280 (53.21%), Postives = 197/280 (70.36%), Query Frame = 1
Query:  196 ASTATAAGAKGASSRHNNNWAVLVCTSRFWFNYRHVANTLSVYHTVRRLGIPDSNIVLMLADDMPCNARNPFPGGVYNSKDHELNLYEGDVEVDYRGEEVSVESFLRLLTGRTLPGTPPSKTLATDEHSNVLIYMNGHGGDQFLKFHDMEEVSSHDLGGALREMELKKRYHRVLFMVDTCQAMTLFEEIDSKDVICIGSSVRGENSYARGSDATIGLSLMDRFTSAMLDFFQAAITKGEDVTANRVRGFSSENSAPLNLRDDVTLGALMHSMRPKSLLSS 1035
            A T  ++ +  A+++H NNWAVLVCTSRFWFNYRH+ANTLS+Y TV+RLGIPD  I+LMLADDM CNARN +P  V+N+K+H+LNLY  +VEVDYRG EV+VE+FLR+LTGR     P SK L +DE S++L+YM GHGGD+FLKF D EE+ SHDL  A+R+M+ K R+  +L MVDTCQA TLF ++ S  V+ IGSS++GENSY+   D+ +G+S++DRFT   L FF+                        LN+ D+ +L +L  S  P SL+S+
Sbjct:   36 AQTTFSSSSSSATTKHTNNWAVLVCTSRFWFNYRHMANTLSLYRTVKRLGIPDERIILMLADDMACNARNKYPAQVFNNKNHKLNLYGDNVEVDYRGYEVTVENFLRVLTGRHETSVPRSKRLLSDEGSHILLYMTGHGGDEFLKFQDSEELQSHDLADAVRQMKEKLRFKELLIMVDTCQAATLFNQLVSPGVLSIGSSMKGENSYSHHLDSDVGVSVVDRFTYYTLAFFER-----------------------LNIYDNASLNSLFTSYNPHSLMST 292          
BLAST of mRNA_E_fasciculatus_S2_contig860.16724.1 vs.
Match: Gpi-anchor (transamidase n=11 Tax=Solanoideae TaxID=424551 RepID=M1BWQ7_SOLTU)

HSP 1 Score: 295 bits (754), Expect = 9.710e-95
Identity = 144/275 (52.36%), Postives = 193/275 (70.18%), Query Frame = 1
Query:  211 AAGAKGASSRHNNNWAVLVCTSRFWFNYRHVANTLSVYHTVRRLGIPDSNIVLMLADDMPCNARNPFPGGVYNSKDHELNLYEGDVEVDYRGEEVSVESFLRLLTGRTLPGTPPSKTLATDEHSNVLIYMNGHGGDQFLKFHDMEEVSSHDLGGALREMELKKRYHRVLFMVDTCQAMTLFEEIDSKDVICIGSSVRGENSYARGSDATIGLSLMDRFTSAMLDFFQAAITKGEDVTANRVRGFSSENSAPLNLRDDVTLGALMHSMRPKSLLSS 1035
            A+ +   ++ H NNWAVLVCTSRFWFNYRH+ANTLS+Y TV+RLGIPD  I+LMLADDM CN RN +P  V+N+++H LNLY  +VEVDYRG EV+VE+FLR+LTGR     P SK L +DE S++L+YM GHGGD+FLKF D EE+ SHDL  A+++M+ K+R+  +L MVDTCQA TLF ++ S  V+ IGSS++GENSY+   DA +G+S++DRFT   L FF+                        +N+ D+ +LG+L  S  P +L+S+
Sbjct:   25 ASSSSATTTMHTNNWAVLVCTSRFWFNYRHMANTLSLYRTVKRLGIPDERIILMLADDMACNTRNKYPAQVFNNENHRLNLYGDNVEVDYRGYEVTVENFLRVLTGRHETAVPRSKRLLSDEGSHILLYMTGHGGDEFLKFQDSEELQSHDLADAVKQMKEKRRFKELLIMVDTCQAATLFSQLQSPGVLTIGSSMKGENSYSHHLDADVGVSVIDRFTFYTLAFFER-----------------------VNMYDNASLGSLFSSYNPNTLMST 276          
BLAST of mRNA_E_fasciculatus_S2_contig860.16724.1 vs.
Match: Uncharacterized (protein n=3 Tax=Musa TaxID=4640 RepID=A0A804L7S9_MUSAM)

HSP 1 Score: 297 bits (760), Expect = 1.260e-94
Identity = 146/265 (55.09%), Postives = 189/265 (71.32%), Query Frame = 1
Query:  241 HNNNWAVLVCTSRFWFNYRHVANTLSVYHTVRRLGIPDSNIVLMLADDMPCNARNPFPGGVYNSKDHELNLYEGDVEVDYRGEEVSVESFLRLLTGRTLPGTPPSKTLATDEHSNVLIYMNGHGGDQFLKFHDMEEVSSHDLGGALREMELKKRYHRVLFMVDTCQAMTLFEEIDSKDVICIGSSVRGENSYARGSDATIGLSLMDRFTSAMLDFFQAAITKGEDVTANRVRGFSSENSAPLNLRDDVTLGALMHSMRPKSLLSS 1035
            HNNNWAVLVCTSRFWFNYRH+ANTLS+Y TV+RLGIPD  I+LMLADDM CNARN +P  V+N+++H+LNLY  +VEVDYRG EV+VE+FLR+LTGR  P  P SK L +DE S++L+YM GHGGD+FLKF D EE+ SHDL  A+R+M+ K R+  +L MVDTCQA TLF ++ S  V+ IGSS++GENSY+   D+ IG+S++DRFT   L FF+                        LN+  + +L +L +S  P  L+S+
Sbjct:   36 HNNNWAVLVCTSRFWFNYRHMANTLSLYRTVKRLGIPDERIILMLADDMACNARNNYPAQVFNNENHQLNLYGDNVEVDYRGYEVTVENFLRVLTGRHDPAVPRSKRLLSDEGSHILLYMTGHGGDEFLKFQDSEELQSHDLADAVRQMKEKSRFKELLIMVDTCQAATLFSQLQSPGVLAIGSSMKGENSYSHHLDSNIGVSVVDRFTFYTLAFFEK-----------------------LNMYSNASLRSLFNSYNPSLLMST 277          
BLAST of mRNA_E_fasciculatus_S2_contig860.16724.1 vs.
Match: Phosphatidylinositol (glycan (Fragment) n=1 Tax=Hirondellea gigas TaxID=1518452 RepID=A0A6A7G831_9CRUS)

HSP 1 Score: 296 bits (757), Expect = 2.180e-94
Identity = 143/253 (56.52%), Postives = 183/253 (72.33%), Query Frame = 1
Query:  232 SSRHNNNWAVLVCTSRFWFNYRHVANTLSVYHTVRRLGIPDSNIVLMLADDMPCNARNPFPGGVYNSKDHELNLYEGDVEVDYRGEEVSVESFLRLLTGRTLPGTPPSKTLATDEHSNVLIYMNGHGGDQFLKFHDMEEVSSHDLGGALREMELKKRYHRVLFMVDTCQAMTLFEEIDSKDVICIGSSVRGENSYARGSDATIGLSLMDRFTSAMLDFFQAAITKGEDVTANRVRGFSSENSAPLNLRDDVTL 990
            +S H +NWAV+V TSR+WFNYRHVAN LS+Y TV+ +GIPDS I+LMLADD+PCN RN FPG V+N++ H LNLY  DVEVDYRG + SVE+FLRL+TGR LP TP SK LATD HSN+LIYM+GHGG+QFLKFHD EE+ S+D+  A  +M  + RY+ +LFMVDTCQA TL+    S +++ IGSS  GENS +   D+  G+S++DRFT   L+FF+    KG +  +   + FSS     L    + TL
Sbjct:   26 TSIHTSNWAVIVDTSRYWFNYRHVANALSLYRTVKNMGIPDSQIILMLADDIPCNPRNSFPGEVFNNRKHSLNLYSEDVEVDYRGTDCSVENFLRLITGRHLPNTPASKRLATDAHSNILIYMSGHGGEQFLKFHDKEEIQSNDIADAFEQMHKQNRYNEILFMVDTCQASTLYNAFYSPNIVAIGSSKIGENSLSYEHDSGTGVSVIDRFTYYTLEFFEREKRKGRNHPSTMYQLFSSYRPELLRSNAEWTL 278          
BLAST of mRNA_E_fasciculatus_S2_contig860.16724.1 vs.
Match: hypothetical (protein n=1 Tax=Puccinia striiformis f. sp. tritici TaxID=168172 RepID=UPI0020080FF5)

HSP 1 Score: 295 bits (754), Expect = 2.990e-94
Identity = 137/237 (57.81%), Postives = 181/237 (76.37%), Query Frame = 1
Query:  241 HNNNWAVLVCTSRFWFNYRHVANTLSVYHTVRRLGIPDSNIVLMLADDMPCNARNPFPGGVYNSKDHELNLYEGDVEVDYRGEEVSVESFLRLLTGRTLPGTPPSKTLATDEHSNVLIYMNGHGGDQFLKFHDMEEVSSHDLGGALREMELKKRYHRVLFMVDTCQAMTLFEEIDSKDVICIGSSVRGENSYARGSDATIGLSLMDRFTSAMLDFFQAAITKGEDVTANRVRGFSSE 951
            H+NNWAVLVCTSRFWFNYRH+ANTL +Y +V+RLGIPDSNI+LMLADDM CN RN FPG VY++ D +L+LY   +EVDYRGEEVSVE+F+RLLTGR + GTP SK L TDE SN+L+YM GHGGD+FLKF D EE+S+ DL  A + M  KKRY+ +LFM+DTCQA T+  ++ S ++I  GSS +GENSY+  +D+ IG++++DRF+  +L   +      +    + V+ F+S+
Sbjct:   21 HSNNWAVLVCTSRFWFNYRHIANTLGMYRSVKRLGIPDSNIILMLADDMACNPRNMFPGTVYSNSDRKLDLYGDGIEVDYRGEEVSVENFIRLLTGRVVEGTPRSKRLMTDERSNILVYMTGHGGDEFLKFQDSEEISAFDLADAFQTMWAKKRYNELLFMIDTCQANTMTTKLYSPNIIATGSSAKGENSYSHHADSDIGVAVVDRFSHFVLSHLEGLNKTSKSTFQDFVKEFASD 257          
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig860.16724.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Putative1.510e-24194.74GPI-anchor transamidase n=2 Tax=Ectocarpus TaxID=2... [more]
Hypothetical3.440e-10759.04protein n=1 Tax=Fibrocapsa japonica TaxID=94617 Re... [more]
Uncharacterized3.230e-9654.85protein (Fragment) n=1 Tax=Genlisea aurea TaxID=19... [more]
GPI-anchor4.360e-9554.72transamidase family protein n=1 Tax=Rhizophora muc... [more]
Hypothetical6.720e-9555.22protein n=2 Tax=Spirodela intermedia TaxID=51605 R... [more]
putative9.430e-9553.21GPI-anchor transamidase n=2 Tax=Impatiens glanduli... [more]
Gpi-anchor9.710e-9552.36transamidase n=11 Tax=Solanoideae TaxID=424551 Rep... [more]
Uncharacterized1.260e-9455.09protein n=3 Tax=Musa TaxID=4640 RepID=A0A804L7S9_M... [more]
Phosphatidylinositol2.180e-9456.52glycan (Fragment) n=1 Tax=Hirondellea gigas TaxID=... [more]
hypothetical2.990e-9457.81protein n=1 Tax=Puccinia striiformis f. sp. tritic... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig860contigE_fasciculatus_S2_contig860:2861..7481 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start0
Seed ortholog score672.2
Seed ortholog evalue1.4e-190
Seed eggNOG ortholog2880.D7FTP3
Preferred namePIGK
Model size1132
KEGG koko:K05290
KEGG Pathwayko00563,ko01100,map00563,map01100
Hectar predicted targeting categorysignal anchor
GOsGO:0003674,GO:0003756,GO:0003824,GO:0003923,GO:0004175,GO:0004197,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0005789,GO:0006464,GO:0006497,GO:0006505,GO:0006506,GO:0006508,GO:0006629,GO:0006643,GO:0006644,GO:0006650,GO:0006661,GO:0006664,GO:0006793,GO:0006796,GO:0006807,GO:0008104,GO:0008150,GO:0008152,GO:0008233,GO:0008234,GO:0008610,GO:0008654,GO:0009058,GO:0009059,GO:0009247,GO:0009987,GO:0012505,GO:0016020,GO:0016021,GO:0016255,GO:0016787,GO:0016853,GO:0016860,GO:0016864,GO:0019538,GO:0019637,GO:0030176,GO:0031224,GO:0031227,GO:0031984,GO:0032991,GO:0033036,GO:0034394,GO:0034613,GO:0034645,GO:0036211,GO:0042157,GO:0042158,GO:0042175,GO:0042765,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044425,GO:0044432,GO:0044444,GO:0044446,GO:0044464,GO:0045017,GO:0046467,GO:0046474,GO:0046486,GO:0046488,GO:0051179,GO:0051641,GO:0070011,GO:0070727,GO:0071704,GO:0090407,GO:0098796,GO:0098827,GO:0140096,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576,GO:1902494,GO:1903509
Exons8
EggNOG free text desc.cysteine-type peptidase activity
EggNOG OGsCOG5206@1,KOG1349@2759
Ec32 ortholog descriptionputative GPI-anchor transamidase
Ec32 orthologEc-11_001670.1
Cds size1131
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig860.16724.1prot_E_fasciculatus_S2_contig860.16724.1Ectocarpus fasciculatus EfasUO2polypeptideE_fasciculatus_S2_contig860 2861..7481 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842518.209291-CDS-E_fasciculatus_S2_contig860:2860..29111696842518.209291-CDS-E_fasciculatus_S2_contig860:2860..2911Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig860 2861..2911 -
1696842518.2323236-CDS-E_fasciculatus_S2_contig860:3287..33861696842518.2323236-CDS-E_fasciculatus_S2_contig860:3287..3386Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig860 3288..3386 -
1696842518.2440722-CDS-E_fasciculatus_S2_contig860:3997..41531696842518.2440722-CDS-E_fasciculatus_S2_contig860:3997..4153Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig860 3998..4153 -
1696842518.2542808-CDS-E_fasciculatus_S2_contig860:4378..44921696842518.2542808-CDS-E_fasciculatus_S2_contig860:4378..4492Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig860 4379..4492 -
1696842518.2648647-CDS-E_fasciculatus_S2_contig860:4888..50411696842518.2648647-CDS-E_fasciculatus_S2_contig860:4888..5041Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig860 4889..5041 -
1696842518.2802591-CDS-E_fasciculatus_S2_contig860:5430..55061696842518.2802591-CDS-E_fasciculatus_S2_contig860:5430..5506Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig860 5431..5506 -
1696842518.2920918-CDS-E_fasciculatus_S2_contig860:6289..65071696842518.2920918-CDS-E_fasciculatus_S2_contig860:6289..6507Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig860 6290..6507 -
1696842518.3031495-CDS-E_fasciculatus_S2_contig860:7217..74811696842518.3031495-CDS-E_fasciculatus_S2_contig860:7217..7481Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig860 7218..7481 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E_fasciculatus_S2_contig860.16724.1

>prot_E_fasciculatus_S2_contig860.16724.1 ID=prot_E_fasciculatus_S2_contig860.16724.1|Name=mRNA_E_fasciculatus_S2_contig860.16724.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=377bp
RDRAAGAKSAYKNTDTMKKRTRSGVSLLVVRSAEVRKTYRAWFLSISLAA
LLVCAAPLFSALGVTASTATAAGAKGASSRHNNNWAVLVCTSRFWFNYRH
VANTLSVYHTVRRLGIPDSNIVLMLADDMPCNARNPFPGGVYNSKDHELN
LYEGDVEVDYRGEEVSVESFLRLLTGRTLPGTPPSKTLATDEHSNVLIYM
NGHGGDQFLKFHDMEEVSSHDLGGALREMELKKRYHRVLFMVDTCQAMTL
FEEIDSKDVICIGSSVRGENSYARGSDATIGLSLMDRFTSAMLDFFQAAI
TKGEDVTANRVRGFSSENSAPLNLRDDVTLGALMHSMRPKSLLSSPTVEL
KGWTGPPLDKHCVGFPSAVAVLCARTR
back to top

mRNA from alignment at E_fasciculatus_S2_contig860:2861..7481-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E_fasciculatus_S2_contig860.16724.1 ID=mRNA_E_fasciculatus_S2_contig860.16724.1|Name=mRNA_E_fasciculatus_S2_contig860.16724.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=4621bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig860:2861..7481- (Ectocarpus fasciculatus EfasUO2)
CGCGATCGCGCTGCTGGTGCCAAATCTGCTTACAAGAACACGGACACCAT GAAGAAGAGGACCAGGTCTGGGGTGTCCTTACTGGTGGTGCGTTCAGCGG AGGTGCGAAAGACATACAGGGCATGGTTTCTGTCAATCTCGTTGGCCGCT CTCCTCGTCTGTGCCGCTCCCTTGTTCTCCGCTCTTGGTGTCACCGCCTC GACAGCGACAGCGGCTGGCGCCAAAGGAGCAAGCTCTCGTCACAACAACA ACTGGGCCGTGCTGGTGAGATGTTTTTTAGAAGGTAGCGCGTGTAGGGTG GAGGTGACGACCCCGTCACACCAATGACAAGCTACGCAACCGGGGATGGA TGCCGATATGTACGCCGTCACACGCGTAGCTCACACACCTGGAAATCTTA TCTCCCGAGGTGCAAGCGGCGCACTGCCAGTCCTTGCCAGGCATCAAGCG CCTGCAAGCACGAATTGGAACAATCGGTTGACGCTCCCTCTGGGGATGCA TGGGAAAAACAGGCTCGCCCGCGACAACCCGCAGAGGAAGGACAAGAAAG TAGATGACAGCTGTGTGCCGCATTTTTTTTTCTTGCCGGAGATTGCTGTT GGAGGGAAAGATCTTCCTAGAGCTCCACTGCTGTGTATGCTAGAGACAAC AGCCTGCACACCACCGAACACTGCCGTTGAAAACGTTCCGAAAACAACGG CTACGTTCCCAAAACAACGGCTACTACTACTATGCATACAGCTTTCCATT AGTTACCCTCACCACACGGTGCTTAGAGTTGACTACAAGTTGGTCCTACG CCAAGCAGCCCATCTGACTGCCAGATACAGGCAAGCACCAGACGCATTCG AGAACAGCTGAGATACAAGAACAGCAGTAATTGTTGCGGAGCATTTCTGG TACGGTTAGTTCCCCTCTCGTGATGAGTACTTGTAATCGGGGCAGCACTT TGCCTCTATGTACAATCGATACAGGTGTGCACATCTCGCTTCTGGTTCAA CTATCGGCACGTGGCCAACACCTTGTCGGTGTACCACACGGTGAGGCGCC TGGGCATCCCGGACTCGAACATCGTGCTGATGCTGGCGGACGATATGCCC TGCAACGCGAGGAATCCGTTTCCGGGGGGGGTATATAACAGCAAGGACCA TGAGCTCAACCTCTACGAAGGAGACGTCGAAGTGGACTACAGGTATTGCA TGTGACTTCCTGTTTGTTCTTTTTAGTGTTGCATCGCACAAGCTCTTCAT TTCGTTGTGGCCGGTCCCGTTTTTTTTTCGTGGAAAGGTTTGTATCTGCA GGAAAGGCAGTTGCTTCTCGTTGCTGCAAGGGAGAAATCTCGTACACGTT GTTGTTAACCTCGCCTCATCAAAAAATCTGGGCACCAGCCTACATGTTTC GGTATATGTTTGACCCGCCAGTTGGGGTGACACAGGCGGAACGTGAAGTC AGGAGTTTTTTTTAATGTCTTTTCTCCTACGGTGCTTGCGTTCAAGTTTT CGCGCAAGAAGAGTTGAGCTCTCTTCCCTGTGTGTTCTGTGAACTCACGG CCACGCGCTTTTCATTTATAAACTGCGAGTTTTGCAAATCCGGAGAAATT CATCCCGCACCATAGAGCCTCGGGTCCGCCTAGGTTACCGACTAAACAAT ACGCCACTGTTGTGTTTCCGCGCTCGTGTTCCAGCGAATGTATCCGCTCC ACAACGACGTGGATCCCTCAACTAACAACGAGTGCGAGGGACCCGTGGCA ATTCCATTGTAATATCCTTTTGCACACACGTTTCTTTTGGTGTGCGTTGG TGTTGTTCTGATTCTGTCTTCCACGACATCATCGCCATCAAAACGAGTTA CCGTCGTTCAGCCGGGCTCAGCTCTGTCGTCGCGGAACATTGCACCAGAA AATAATCGAAATCCGCGTTCAACCTCACGGTCGATCGCAACCGCGCACCC TGCTGTTTTTTTTTTTCGTGTCCAGAGGAGAAGAAGTGAGCGTGGAGAGC TTCCTGCGCCTGTTGACCGGGCGAACACTGCCGGGAACACCGCCTTCCAA GGTAATCCGGATGAAGGAAGCGAGACCGCACCTTTCATATGTTTCGTCCT GATTCATGTGTTGTTCGCTCTATGCGCCTCTAACCAACCAAACATCTACA ATTCCGCGATGCTATGTTTTTTGAAGAAAAATACAAATACATGTTTTGTT GTAGTTATCTCGGTCTCTGTGTGTCTCTCTCTGTCTCTGTGTGTCTGTCT GTCTGTCTGTCTGTCTGTCTGTCTGTCTGTCTGTCTGTCTCTCTCTCTCT CTCTCTCTTGGCCCTTCTGTGTTTCCATTGTGCATGCTTGGCTGTTTGTT GCTTCCCCTTCTCCCGTCCGACTTTGCCCCCGCTCCCCTCTCTTCCTTCG CCCCCCTCTCGACATCATCTCTTGCGAACACGTGGTACAGACGCTGGCGA CAGACGAGCACAGCAACGTGTTAATCTACATGAACGGACACGGCGGAGAC CAGTTCCTCAAGTTCCACGACATGGAAGAAGTCTCCAGCCACGACCTAGG GGGAGCCTTGCGAGAGATGGAGCTCAAGAAGCGGTATCACAGGGTGCGTG TCCTAAGACGCCAAGCCGTCTGATTCGGGGCGGCGTTGGGTGTTGGAGCG GAAGCACTCACAGTCAAGTCCCGAAGGCGAATCTACGGCGGTAATCGCGG TACTATTCTAGCGGTATTGTTCAGGGCAAACGTAAGTTGACCTCTGAGTT TACGCAGTATGTGTAACCCCGTCGTCGACCTCTCTGATATCGTGCGTTTT GGCCTGTCGGCTACTTGCTGCCTTCTCTTGTGTGCCTCTTTTGCCAAGAA ATTGGCATTGGCCACCGAATGCTTGCGACCACCGCGCCCCTTTGCTCTCT GCTCGCGGCCGTGTTGATTCGACGCTGGGTGCGATTCAACGAACAACATT GAAAATCGCCGAACTTTCGTTGGCACACGACAACAACAGGTGTTGTTCAT GGTGGACACGTGCCAGGCGATGACTCTCTTCGAAGAGATCGATTCAAAGG ATGTAATCTGCATCGGCAGCAGCGTCCGGGGGGAGAACTCGTATGCTCGA GGGGTGAGTTCTTGTACTACACCAGCGTGTCTCGCATCTAGTTGCTACCG TCGAAAACCTTCACGCTTAAAGGTTGAGAGCAAGAATCTCGGCAAGGCGT GCAATATCTGCATTTCGTGCCTACATATCTAGTCAGAGAACGCAACCTTG ATGGTGATTCCGGCAACTAACCGTGTCCTGCTCTGCGTATTTCTCCGAAT TTTTGACACTCGCCGATGTCCTCGGCAGAGCGACGCAACGATCGGGCTGT CCCTGATGGACAGGTTCACGTCGGCTATGCTGGACTTTTTTCAGGCCGCG ATAACGAAGGGGGAAGACGTAACGGCGAACAGAGTGCGGGGGTTCAGTAG CGAAAACTCCGCCCCGCTGAACCTGAGAGATGATGTAGGTTTATTTGAGA CAGTTGTGTTTTTTTTTTTTCGTTTTTCACGTCGGTGGTTTCGGTTTGCT AGTGTTCGCTGCCAGATGGGTTCGTGTGGAAGTAGTTGTAAATGGGGAAA TGGATGTCATTTTGCAGAAGGTTGCGCATGAGCGGTCTTGACGTTCGTTG TCGTTGGCCCTTGATTCCCATGTTATTTTTTTGCTACTCGTGTGGGTCGT GTGGATAGGTGTGCTGTTGCTGGTTGCTACAGTTGAGTTTGCGTTGTTTT TTTTGTTTCCGTTGGTGCCATCGGTGCTCAGCCGAGATTGAACAGCAGCC GCAACATCGTGTTTTTGCTCTCCAGATCTAATGCTGCGGAGGCGTCTTTG GAACATTGCTACTGTTGTGCTGGCTACGACTGGTGCCAATAATAACCTGC GAAATACCTGCCTGTGTTGCCCGCCCCCTGTCTGCGCTCCCCGTCCAGCT ACCTTCAAACCAAGCCACCCACCGCATTGTTTGTATCGTGTTTGGTCTTG TTGGATGCGTGAAAGAAGGCCATCCCGCCCCTGGCGATTGGTACTTTATG TAGAGCGCACTACGACATTAAAGGCAACTCTTGTTTGGTATTCAGGTCAC CCTAGGAGCCTTGATGCATTCGATGCGGCCGAAGTCACTCCTCTCATCGC CCACGGTGGAGCTCAAAGGCTGGACGGGGCCCCCGTTAGATAAGGTTCGT CTTCCACACAGGGGTTGCACCTTCGAGAGCGCGCATACACCTTGCACGTT TAAATTCAGGCGTAGTCGTGGGCATCAATGTGGTACTCGGATCGGTTCGC CGTACAATGTACAAGACTGCTGCGTCGACGTCACTTTTTTGGTGTCAAAT AATCGTCGGCACGCGTGTAGCGATGAAATTTTGTGCGCAACGTGTCCAGG AGCTTTGGGATGCGCGCAGGTTGCGCTTGCGCAGTGAAGTCTCGCGGTGT TCGTCTTCGAAATTGCCACGCCAAAGTAGGTTTTTGTTCGCGCTTTGGAG ACTTGTGCTATGTTATTTTGTCCCTCTTATCCCTCTTTGCTGCGCAGCAA TCTGTCCGTTATCCCCCCAGCACTGTGTGGGGTTTCCCTCGGCCGTAGCC GTGCTGTGTGCTCGAACGAGG
back to top

Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig860:2861..7481-

>mRNA_E_fasciculatus_S2_contig860.16724.1 ID=mRNA_E_fasciculatus_S2_contig860.16724.1|Name=mRNA_E_fasciculatus_S2_contig860.16724.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=1131bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig860:2861..7481- (Ectocarpus fasciculatus EfasUO2)
CGCGATCGCGCTGCTGGTGCCAAATCTGCTTACAAGAACACGGACACCAT
GAAGAAGAGGACCAGGTCTGGGGTGTCCTTACTGGTGGTGCGTTCAGCGG
AGGTGCGAAAGACATACAGGGCATGGTTTCTGTCAATCTCGTTGGCCGCT
CTCCTCGTCTGTGCCGCTCCCTTGTTCTCCGCTCTTGGTGTCACCGCCTC
GACAGCGACAGCGGCTGGCGCCAAAGGAGCAAGCTCTCGTCACAACAACA
ACTGGGCCGTGCTGGTGTGCACATCTCGCTTCTGGTTCAACTATCGGCAC
GTGGCCAACACCTTGTCGGTGTACCACACGGTGAGGCGCCTGGGCATCCC
GGACTCGAACATCGTGCTGATGCTGGCGGACGATATGCCCTGCAACGCGA
GGAATCCGTTTCCGGGGGGGGTATATAACAGCAAGGACCATGAGCTCAAC
CTCTACGAAGGAGACGTCGAAGTGGACTACAGAGGAGAAGAAGTGAGCGT
GGAGAGCTTCCTGCGCCTGTTGACCGGGCGAACACTGCCGGGAACACCGC
CTTCCAAGACGCTGGCGACAGACGAGCACAGCAACGTGTTAATCTACATG
AACGGACACGGCGGAGACCAGTTCCTCAAGTTCCACGACATGGAAGAAGT
CTCCAGCCACGACCTAGGGGGAGCCTTGCGAGAGATGGAGCTCAAGAAGC
GGTATCACAGGGTGTTGTTCATGGTGGACACGTGCCAGGCGATGACTCTC
TTCGAAGAGATCGATTCAAAGGATGTAATCTGCATCGGCAGCAGCGTCCG
GGGGGAGAACTCGTATGCTCGAGGGAGCGACGCAACGATCGGGCTGTCCC
TGATGGACAGGTTCACGTCGGCTATGCTGGACTTTTTTCAGGCCGCGATA
ACGAAGGGGGAAGACGTAACGGCGAACAGAGTGCGGGGGTTCAGTAGCGA
AAACTCCGCCCCGCTGAACCTGAGAGATGATGTCACCCTAGGAGCCTTGA
TGCATTCGATGCGGCCGAAGTCACTCCTCTCATCGCCCACGGTGGAGCTC
AAAGGCTGGACGGGGCCCCCGTTAGATAAGCACTGTGTGGGGTTTCCCTC
GGCCGTAGCCGTGCTGTGTGCTCGAACGAGG
back to top