mRNA_E_fasciculatus_S2_contig860.16724.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig860.16724.1 vs.
Match: Putative (GPI-anchor transamidase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FTP3_ECTSI) HSP 1 Score: 668 bits (1724), Expect = 1.510e-241 Identity = 342/361 (94.74%), Postives = 347/361 (96.12%), Query Frame = 1
Query: 49 MKKRTRSGVSLLVVRSAEVRKTYRAWFLSISLAALLVCAAPLFSALGVTASTATAAGAKGASSRHNNNWAVLVCTSRFWFNYRHVANTLSVYHTVRRLGIPDSNIVLMLADDMPCNARNPFPGGVYNSKDHELNLYEGDVEVDYRGEEVSVESFLRLLTGRTLPGTPPSKTLATDEHSNVLIYMNGHGGDQFLKFHDMEEVSSHDLGGALREMELKKRYHRVLFMVDTCQAMTLFEEIDSKDVICIGSSVRGENSYARGSDATIGLSLMDRFTSAMLDFFQAAITKGEDVTANRVRGFSSENSAPLNLRDDVTLGALMHSMRPKSLLSSPTVELKGWTGPPLDKHCVGFPSAVAVLCARTR 1131
MKKR SGVSLLVVRSAEVRKTYRAWFLSISLA LL+C+ PLFSA+GVTASTA AGAKGASSRHNNNWAVLVCTSRFWFNYRHVANTLSVYHTVRRLGIPDSNIVLMLADDMPCNARNPFPGGVYNSKDHELNLYEGDVEVDYRGEEVSVESFLRLLTGRTLPGTPPSKTLATDEHSNVLIYMNGHGGDQFLKFHDMEEVSSHDLGGALREMELKKRYHRVLFMVDTCQAMTLFEEIDSKDVICIGSSVRGENSYARGSDATIGLSLMDRFTSAMLDFFQAAITKGEDVTANRVRGFSS NSAPLNLR+DVTLGALMHSMRPKSLLSSPTVELKGWTGPPL+ VGF AVA L ARTR
Sbjct: 1 MKKRAGSGVSLLVVRSAEVRKTYRAWFLSISLAVLLLCSVPLFSAVGVTASTA--AGAKGASSRHNNNWAVLVCTSRFWFNYRHVANTLSVYHTVRRLGIPDSNIVLMLADDMPCNARNPFPGGVYNSKDHELNLYEGDVEVDYRGEEVSVESFLRLLTGRTLPGTPPSKTLATDEHSNVLIYMNGHGGDQFLKFHDMEEVSSHDLGGALREMELKKRYHRVLFMVDTCQAMTLFEEIDSKDVICIGSSVRGENSYARGSDATIGLSLMDRFTSAMLDFFQAAITKGEDVTANRVRGFSSGNSAPLNLRNDVTLGALMHSMRPKSLLSSPTVELKGWTGPPLNMDGVGFAPAVATLRARTR 359
BLAST of mRNA_E_fasciculatus_S2_contig860.16724.1 vs.
Match: Hypothetical (protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V326_9STRA) HSP 1 Score: 326 bits (836), Expect = 3.440e-107 Identity = 160/271 (59.04%), Postives = 201/271 (74.17%), Query Frame = 1
Query: 238 RHNNNWAVLVCTSRFWFNYRHVANTLSVYHTVRRLGIPDSNIVLMLADDMPCNARNPFPGGVYNSKDHELNLYEGDVEVDYRGEEVSVESFLRLLTGRTLPGTPPSKTLATDEHSNVLIYMNGHGGDQFLKFHDMEEVSSHDLGGALREMELKKRYHRVLFMVDTCQAMTLFEEIDSKDVICIGSSVRGENSYARGSDATIGLSLMDRFTSAMLDFFQAAITKGEDVTANRVRGFSSENSAPLNLRDDVTLGALMHSMRPKSLLSSPTVEL 1050
RHNNNW VLV TSRFWFNYRH+ANTLS+YHTV+RLGIPDS I+LMLADDMPCNARNP+PG +YN+KD +LNLY VEVDYRG +V+VE+FLRLLTGRT PG P SK L TDEHSN+LI+M+GHGGD FLKF D EEVSSHD+ A+ EM +K RYH +L +VDTCQA TL ++I S +V+ IGSS GENSYA SD ++G++++DRFT A LDFF+ R F+++ + +L +L+ P L S+P +++
Sbjct: 30 RHNNNWVVLVSTSRFWFNYRHIANTLSIYHTVKRLGIPDSQIILMLADDMPCNARNPYPGEIYNNKDRKLNLYGDVVEVDYRGTDVTVENFLRLLTGRTKPGLPFSKLLNTDEHSNILIFMSGHGGDGFLKFQDSEEVSSHDIADAIEEMNIKGRYHEILLIVDTCQAGTLGQQIYSPNVVSIGSSKLGENSYAHHSDHSLGVAVIDRFTEATLDFFE--------------RRFNADGVPRSSNSKSTSLASLISFYDPVKLKSTPDIQV 286
BLAST of mRNA_E_fasciculatus_S2_contig860.16724.1 vs.
Match: Uncharacterized (protein (Fragment) n=1 Tax=Genlisea aurea TaxID=192259 RepID=S8DYY6_9LAMI) HSP 1 Score: 298 bits (762), Expect = 3.230e-96 Identity = 147/268 (54.85%), Postives = 188/268 (70.15%), Query Frame = 1
Query: 232 SSRHNNNWAVLVCTSRFWFNYRHVANTLSVYHTVRRLGIPDSNIVLMLADDMPCNARNPFPGGVYNSKDHELNLYEGDVEVDYRGEEVSVESFLRLLTGRTLPGTPPSKTLATDEHSNVLIYMNGHGGDQFLKFHDMEEVSSHDLGGALREMELKKRYHRVLFMVDTCQAMTLFEEIDSKDVICIGSSVRGENSYARGSDATIGLSLMDRFTSAMLDFFQAAITKGEDVTANRVRGFSSENSAPLNLRDDVTLGALMHSMRPKSLLSS 1035
S+ H NNWAVLVCTSRFWFNYRH+ANTLS+Y TV+RLGIPD I+LMLADDM CNARN +P V+N+++H LNLY +VEVDYRG EV+VE+FLR+LTGR P SK L +DE S++L+YM GHGGD+FLKF D EE+ SHDL A+++M+ KKR+ +L M DTCQA TLF ++ S V+ IGSS +GENSY+ D +G+S++DRFT L FF+ LN+ DD +LG+L S PK L+S+
Sbjct: 24 SATHTNNWAVLVCTSRFWFNYRHMANTLSLYRTVKRLGIPDERIILMLADDMACNARNKYPAQVFNNENHRLNLYGDNVEVDYRGYEVTVENFLRVLTGRHETAVPRSKRLLSDEGSHILVYMTGHGGDEFLKFQDSEELQSHDLADAVKQMKEKKRFKELLIMADTCQAATLFNQLQSPGVLTIGSSKKGENSYSHHLDPDVGVSVVDRFTFYTLAFFER-----------------------LNIYDDASLGSLFKSYNPKLLMST 268
BLAST of mRNA_E_fasciculatus_S2_contig860.16724.1 vs.
Match: GPI-anchor (transamidase family protein n=1 Tax=Rhizophora mucronata TaxID=61149 RepID=A0A2P2JFN2_RHIMU) HSP 1 Score: 297 bits (760), Expect = 4.360e-95 Identity = 145/265 (54.72%), Postives = 189/265 (71.32%), Query Frame = 1
Query: 241 HNNNWAVLVCTSRFWFNYRHVANTLSVYHTVRRLGIPDSNIVLMLADDMPCNARNPFPGGVYNSKDHELNLYEGDVEVDYRGEEVSVESFLRLLTGRTLPGTPPSKTLATDEHSNVLIYMNGHGGDQFLKFHDMEEVSSHDLGGALREMELKKRYHRVLFMVDTCQAMTLFEEIDSKDVICIGSSVRGENSYARGSDATIGLSLMDRFTSAMLDFFQAAITKGEDVTANRVRGFSSENSAPLNLRDDVTLGALMHSMRPKSLLSS 1035
H NNWAVLVCTSRFWFNYRH+ANTLS+Y TV+RLGIPD I+LMLADDM CN+RN FP V+N+++H LNLY +VEVDYRG EV+VE+F R+LTGR P P SK L +DE S+VL+YM GHGGD+FLKF D EE+ SHDL A+R+M+ K R+ +L MVDTCQA TLF+++ S V+ IGSS++GENSY+ D+ +G+S++DRFT L FF+ LN+ D+ +L +L +S P +L+S+
Sbjct: 2 HTNNWAVLVCTSRFWFNYRHMANTLSLYRTVKRLGIPDERIILMLADDMACNSRNKFPAQVFNNENHRLNLYGDNVEVDYRGYEVTVENFFRVLTGRHAPAVPRSKRLLSDEGSHVLLYMTGHGGDEFLKFQDSEELQSHDLADAVRQMKEKHRFKELLIMVDTCQAATLFDQLHSPGVLAIGSSMKGENSYSHHLDSDVGVSVVDRFTFYTLAFFER-----------------------LNMYDNASLSSLFNSYDPNTLMST 243
BLAST of mRNA_E_fasciculatus_S2_contig860.16724.1 vs.
Match: Hypothetical (protein n=2 Tax=Spirodela intermedia TaxID=51605 RepID=A0A7I8K0I5_SPIIN) HSP 1 Score: 298 bits (762), Expect = 6.720e-95 Identity = 148/268 (55.22%), Postives = 190/268 (70.90%), Query Frame = 1
Query: 232 SSRHNNNWAVLVCTSRFWFNYRHVANTLSVYHTVRRLGIPDSNIVLMLADDMPCNARNPFPGGVYNSKDHELNLYEGDVEVDYRGEEVSVESFLRLLTGRTLPGTPPSKTLATDEHSNVLIYMNGHGGDQFLKFHDMEEVSSHDLGGALREMELKKRYHRVLFMVDTCQAMTLFEEIDSKDVICIGSSVRGENSYARGSDATIGLSLMDRFTSAMLDFFQAAITKGEDVTANRVRGFSSENSAPLNLRDDVTLGALMHSMRPKSLLSS 1035
S+ HNNNWAVLVCTSRFWFNYRH+ANTLS+Y TV+RLGIPD I+LMLADDM CNARN +P V+N+++H++NLY +VEVDYRG EV+VE+FLR+LTGR P SK L +DE S++L+YM GHGGDQFLKF D EE+ SHDL A+++M K+R+ +L MVDTCQA TLF + DS V+ IGSSV+GENSY+ D+ IG+S++DRFT L FF+ LN+ + +L +L +S P LLS+
Sbjct: 34 SAMHNNNWAVLVCTSRFWFNYRHMANTLSLYRTVKRLGIPDERIILMLADDMACNARNNYPAQVFNNENHQINLYGDNVEVDYRGYEVTVENFLRVLTGRHETAVPRSKRLLSDEGSHILLYMTGHGGDQFLKFQDSEELQSHDLADAVKQMSEKQRFKELLIMVDTCQAATLFSQFDSPGVLSIGSSVKGENSYSHHLDSDIGVSVVDRFTFYTLAFFEK-----------------------LNIYSNASLSSLFNSYNPNWLLST 278
BLAST of mRNA_E_fasciculatus_S2_contig860.16724.1 vs.
Match: putative (GPI-anchor transamidase n=2 Tax=Impatiens glandulifera TaxID=253017 RepID=UPI001FB0F723) HSP 1 Score: 298 bits (762), Expect = 9.430e-95 Identity = 149/280 (53.21%), Postives = 197/280 (70.36%), Query Frame = 1
Query: 196 ASTATAAGAKGASSRHNNNWAVLVCTSRFWFNYRHVANTLSVYHTVRRLGIPDSNIVLMLADDMPCNARNPFPGGVYNSKDHELNLYEGDVEVDYRGEEVSVESFLRLLTGRTLPGTPPSKTLATDEHSNVLIYMNGHGGDQFLKFHDMEEVSSHDLGGALREMELKKRYHRVLFMVDTCQAMTLFEEIDSKDVICIGSSVRGENSYARGSDATIGLSLMDRFTSAMLDFFQAAITKGEDVTANRVRGFSSENSAPLNLRDDVTLGALMHSMRPKSLLSS 1035
A T ++ + A+++H NNWAVLVCTSRFWFNYRH+ANTLS+Y TV+RLGIPD I+LMLADDM CNARN +P V+N+K+H+LNLY +VEVDYRG EV+VE+FLR+LTGR P SK L +DE S++L+YM GHGGD+FLKF D EE+ SHDL A+R+M+ K R+ +L MVDTCQA TLF ++ S V+ IGSS++GENSY+ D+ +G+S++DRFT L FF+ LN+ D+ +L +L S P SL+S+
Sbjct: 36 AQTTFSSSSSSATTKHTNNWAVLVCTSRFWFNYRHMANTLSLYRTVKRLGIPDERIILMLADDMACNARNKYPAQVFNNKNHKLNLYGDNVEVDYRGYEVTVENFLRVLTGRHETSVPRSKRLLSDEGSHILLYMTGHGGDEFLKFQDSEELQSHDLADAVRQMKEKLRFKELLIMVDTCQAATLFNQLVSPGVLSIGSSMKGENSYSHHLDSDVGVSVVDRFTYYTLAFFER-----------------------LNIYDNASLNSLFTSYNPHSLMST 292
BLAST of mRNA_E_fasciculatus_S2_contig860.16724.1 vs.
Match: Gpi-anchor (transamidase n=11 Tax=Solanoideae TaxID=424551 RepID=M1BWQ7_SOLTU) HSP 1 Score: 295 bits (754), Expect = 9.710e-95 Identity = 144/275 (52.36%), Postives = 193/275 (70.18%), Query Frame = 1
Query: 211 AAGAKGASSRHNNNWAVLVCTSRFWFNYRHVANTLSVYHTVRRLGIPDSNIVLMLADDMPCNARNPFPGGVYNSKDHELNLYEGDVEVDYRGEEVSVESFLRLLTGRTLPGTPPSKTLATDEHSNVLIYMNGHGGDQFLKFHDMEEVSSHDLGGALREMELKKRYHRVLFMVDTCQAMTLFEEIDSKDVICIGSSVRGENSYARGSDATIGLSLMDRFTSAMLDFFQAAITKGEDVTANRVRGFSSENSAPLNLRDDVTLGALMHSMRPKSLLSS 1035
A+ + ++ H NNWAVLVCTSRFWFNYRH+ANTLS+Y TV+RLGIPD I+LMLADDM CN RN +P V+N+++H LNLY +VEVDYRG EV+VE+FLR+LTGR P SK L +DE S++L+YM GHGGD+FLKF D EE+ SHDL A+++M+ K+R+ +L MVDTCQA TLF ++ S V+ IGSS++GENSY+ DA +G+S++DRFT L FF+ +N+ D+ +LG+L S P +L+S+
Sbjct: 25 ASSSSATTTMHTNNWAVLVCTSRFWFNYRHMANTLSLYRTVKRLGIPDERIILMLADDMACNTRNKYPAQVFNNENHRLNLYGDNVEVDYRGYEVTVENFLRVLTGRHETAVPRSKRLLSDEGSHILLYMTGHGGDEFLKFQDSEELQSHDLADAVKQMKEKRRFKELLIMVDTCQAATLFSQLQSPGVLTIGSSMKGENSYSHHLDADVGVSVIDRFTFYTLAFFER-----------------------VNMYDNASLGSLFSSYNPNTLMST 276
BLAST of mRNA_E_fasciculatus_S2_contig860.16724.1 vs.
Match: Uncharacterized (protein n=3 Tax=Musa TaxID=4640 RepID=A0A804L7S9_MUSAM) HSP 1 Score: 297 bits (760), Expect = 1.260e-94 Identity = 146/265 (55.09%), Postives = 189/265 (71.32%), Query Frame = 1
Query: 241 HNNNWAVLVCTSRFWFNYRHVANTLSVYHTVRRLGIPDSNIVLMLADDMPCNARNPFPGGVYNSKDHELNLYEGDVEVDYRGEEVSVESFLRLLTGRTLPGTPPSKTLATDEHSNVLIYMNGHGGDQFLKFHDMEEVSSHDLGGALREMELKKRYHRVLFMVDTCQAMTLFEEIDSKDVICIGSSVRGENSYARGSDATIGLSLMDRFTSAMLDFFQAAITKGEDVTANRVRGFSSENSAPLNLRDDVTLGALMHSMRPKSLLSS 1035
HNNNWAVLVCTSRFWFNYRH+ANTLS+Y TV+RLGIPD I+LMLADDM CNARN +P V+N+++H+LNLY +VEVDYRG EV+VE+FLR+LTGR P P SK L +DE S++L+YM GHGGD+FLKF D EE+ SHDL A+R+M+ K R+ +L MVDTCQA TLF ++ S V+ IGSS++GENSY+ D+ IG+S++DRFT L FF+ LN+ + +L +L +S P L+S+
Sbjct: 36 HNNNWAVLVCTSRFWFNYRHMANTLSLYRTVKRLGIPDERIILMLADDMACNARNNYPAQVFNNENHQLNLYGDNVEVDYRGYEVTVENFLRVLTGRHDPAVPRSKRLLSDEGSHILLYMTGHGGDEFLKFQDSEELQSHDLADAVRQMKEKSRFKELLIMVDTCQAATLFSQLQSPGVLAIGSSMKGENSYSHHLDSNIGVSVVDRFTFYTLAFFEK-----------------------LNMYSNASLRSLFNSYNPSLLMST 277
BLAST of mRNA_E_fasciculatus_S2_contig860.16724.1 vs.
Match: Phosphatidylinositol (glycan (Fragment) n=1 Tax=Hirondellea gigas TaxID=1518452 RepID=A0A6A7G831_9CRUS) HSP 1 Score: 296 bits (757), Expect = 2.180e-94 Identity = 143/253 (56.52%), Postives = 183/253 (72.33%), Query Frame = 1
Query: 232 SSRHNNNWAVLVCTSRFWFNYRHVANTLSVYHTVRRLGIPDSNIVLMLADDMPCNARNPFPGGVYNSKDHELNLYEGDVEVDYRGEEVSVESFLRLLTGRTLPGTPPSKTLATDEHSNVLIYMNGHGGDQFLKFHDMEEVSSHDLGGALREMELKKRYHRVLFMVDTCQAMTLFEEIDSKDVICIGSSVRGENSYARGSDATIGLSLMDRFTSAMLDFFQAAITKGEDVTANRVRGFSSENSAPLNLRDDVTL 990
+S H +NWAV+V TSR+WFNYRHVAN LS+Y TV+ +GIPDS I+LMLADD+PCN RN FPG V+N++ H LNLY DVEVDYRG + SVE+FLRL+TGR LP TP SK LATD HSN+LIYM+GHGG+QFLKFHD EE+ S+D+ A +M + RY+ +LFMVDTCQA TL+ S +++ IGSS GENS + D+ G+S++DRFT L+FF+ KG + + + FSS L + TL
Sbjct: 26 TSIHTSNWAVIVDTSRYWFNYRHVANALSLYRTVKNMGIPDSQIILMLADDIPCNPRNSFPGEVFNNRKHSLNLYSEDVEVDYRGTDCSVENFLRLITGRHLPNTPASKRLATDAHSNILIYMSGHGGEQFLKFHDKEEIQSNDIADAFEQMHKQNRYNEILFMVDTCQASTLYNAFYSPNIVAIGSSKIGENSLSYEHDSGTGVSVIDRFTYYTLEFFEREKRKGRNHPSTMYQLFSSYRPELLRSNAEWTL 278
BLAST of mRNA_E_fasciculatus_S2_contig860.16724.1 vs.
Match: hypothetical (protein n=1 Tax=Puccinia striiformis f. sp. tritici TaxID=168172 RepID=UPI0020080FF5) HSP 1 Score: 295 bits (754), Expect = 2.990e-94 Identity = 137/237 (57.81%), Postives = 181/237 (76.37%), Query Frame = 1
Query: 241 HNNNWAVLVCTSRFWFNYRHVANTLSVYHTVRRLGIPDSNIVLMLADDMPCNARNPFPGGVYNSKDHELNLYEGDVEVDYRGEEVSVESFLRLLTGRTLPGTPPSKTLATDEHSNVLIYMNGHGGDQFLKFHDMEEVSSHDLGGALREMELKKRYHRVLFMVDTCQAMTLFEEIDSKDVICIGSSVRGENSYARGSDATIGLSLMDRFTSAMLDFFQAAITKGEDVTANRVRGFSSE 951
H+NNWAVLVCTSRFWFNYRH+ANTL +Y +V+RLGIPDSNI+LMLADDM CN RN FPG VY++ D +L+LY +EVDYRGEEVSVE+F+RLLTGR + GTP SK L TDE SN+L+YM GHGGD+FLKF D EE+S+ DL A + M KKRY+ +LFM+DTCQA T+ ++ S ++I GSS +GENSY+ +D+ IG++++DRF+ +L + + + V+ F+S+
Sbjct: 21 HSNNWAVLVCTSRFWFNYRHIANTLGMYRSVKRLGIPDSNIILMLADDMACNPRNMFPGTVYSNSDRKLDLYGDGIEVDYRGEEVSVENFIRLLTGRVVEGTPRSKRLMTDERSNILVYMTGHGGDEFLKFQDSEEISAFDLADAFQTMWAKKRYNELLFMIDTCQANTMTTKLYSPNIIATGSSAKGENSYSHHADSDIGVAVVDRFSHFVLSHLEGLNKTSKSTFQDFVKEFASD 257 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig860.16724.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig860.16724.1 >prot_E_fasciculatus_S2_contig860.16724.1 ID=prot_E_fasciculatus_S2_contig860.16724.1|Name=mRNA_E_fasciculatus_S2_contig860.16724.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=377bp RDRAAGAKSAYKNTDTMKKRTRSGVSLLVVRSAEVRKTYRAWFLSISLAAback to top mRNA from alignment at E_fasciculatus_S2_contig860:2861..7481- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig860.16724.1 ID=mRNA_E_fasciculatus_S2_contig860.16724.1|Name=mRNA_E_fasciculatus_S2_contig860.16724.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=4621bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig860:2861..7481- (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig860:2861..7481- >mRNA_E_fasciculatus_S2_contig860.16724.1 ID=mRNA_E_fasciculatus_S2_contig860.16724.1|Name=mRNA_E_fasciculatus_S2_contig860.16724.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=1131bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig860:2861..7481- (Ectocarpus fasciculatus EfasUO2)back to top |