mRNA_E_fasciculatus_S2_contig85.16631.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig85.16631.1 vs.
Match: Thioesterase (domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JUF1_9PHAE) HSP 1 Score: 507 bits (1306), Expect = 1.200e-178 Identity = 247/262 (94.27%), Postives = 253/262 (96.56%), Query Frame = 1
Query: 1 MSSSALEKWVVCRRVKPDASIRLICAAWAGGSASSFNKWTSKLPEAVELHALELPGRMRRSKEDSLTSVPAIVEGVAQALVAMGLLDKPFALFGHSFGSLVMFELARKLKEDIGKIPVYLIVSGCRPPDMCVGGGRSPPISQLPRDALVDHLIGLGGMPEELRDQTELVDYFLPPIRADYTAFEGYRYEPRPGDDSRPITCPIICLGGEEDGGAPRSDLEHWSSLTAAEFRLRMFGGGHFFLQGQGEQAVLTFLGDVLTEKL 786
MSSSALEKWVVCRRVK DASIRL CAAWAGGSASSFNKWTSK+PEAVELHALE PGRMRRSKEDSLTSV AIVEGVAQALV MGLLDKPFALFGHSFGSLVMFELARKLKED GKIPVYL+VSGC PPDMCVGGGRSPPISQLPRDALVDHLIGLGGMPEELRDQTELVDYFLPPIRADYTA+EGYRYEPRPGDDSRPITCPIICLGGEEDGGAPRSDLE WSSLTA EFRL+MFGGGHFFLQG+GEQAVLTFLG+VLTEKL
Sbjct: 1 MSSSALEKWVVCRRVKADASIRLFCAAWAGGSASSFNKWTSKMPEAVELHALEFPGRMRRSKEDSLTSVSAIVEGVAQALVTMGLLDKPFALFGHSFGSLVMFELARKLKEDAGKIPVYLVVSGCCPPDMCVGGGRSPPISQLPRDALVDHLIGLGGMPEELRDQTELVDYFLPPIRADYTAYEGYRYEPRPGDDSRPITCPIICLGGEEDGGAPRSDLELWSSLTAGEFRLQMFGGGHFFLQGEGEQAVLTFLGNVLTEKL 262
BLAST of mRNA_E_fasciculatus_S2_contig85.16631.1 vs.
Match: Gramicidin (dehydrogenase n=1 Tax=Hapalosiphon sp. MRB220 TaxID=1704290 RepID=A0A0M0SMK7_9CYAN) HSP 1 Score: 187 bits (475), Expect = 2.760e-53 Identity = 105/261 (40.23%), Postives = 143/261 (54.79%), Query Frame = 1
Query: 4 SSSALEKWVVCRRVKPDASIRLICAAWAGGSASSFNKWTSKLPEAVELHALELPGRMRRSKEDSLTSVPAIVEGVAQALVAMGLLDKPFALFGHSFGSLVMFELARKLKEDIGKIPVYLIVSGCRPPDMCVGGGRSPPISQLPRDALVDHLIGLGGMPEELRDQTELVDYFLPPIRADYTAFEGYRYEPRPGDDSRPITCPIICLGGEEDGGAPRSDLEHWSSLTAAEFRLRMFGGGHFFLQGQGEQAVLTFLGDVLTEKL 786
++S L+ W VC + P+A IRL C +AGGSA+ F W++ LP VE+ A+ELPGR R K T + +V +A L LDKPFA FGHS G LV FELAR L++ G IP +L VS R P + PPI +LP ++ L L G PE L + EL+ F+P IRAD+ E Y Y P+ P+ CPI GG +D ++ W T+A F L M G HFFL + +FL +++ +K+
Sbjct: 3 NTSNLDSWFVCYKPNPEAKIRLFCFPYAGGSANIFRSWSNDLPPTVEICAIELPGRGMRIKLPLFTQLEPLVTELASVLKPN--LDKPFAFFGHSMGGLVSFELARLLRKQYGVIPSHLFVSARRAPQLV---SNKPPIHRLPDAEFLEELRHLNGTPEALLENDELMQLFMPIIRADFAVLENYIYTPQ-----TPLDCPITAFGGLQDQEVNHDQIKAWEEQTSAYFSLHMLPGNHFFLH-----SFQSFLLNIIYKKI 248
BLAST of mRNA_E_fasciculatus_S2_contig85.16631.1 vs.
Match: Surfactin (synthase thioesterase subunit n=2 Tax=Thermosporothrix TaxID=768650 RepID=A0A326U590_9CHLR) HSP 1 Score: 185 bits (470), Expect = 1.660e-52 Identity = 90/240 (37.50%), Postives = 137/240 (57.08%), Query Frame = 1
Query: 25 WVVCRRVKPDASIRLICAAWAGGSASSFNKWTSKLPEAVELHALELPGRMRRSKEDSLTSVPAIVEGVAQALVAMGLLDKPFALFGHSFGSLVMFELARKLKEDIGKIPVYLIVSGCRPPDMCVGGGRSPPISQLPRDALVDHLIGLGGMPEELRDQTELVDYFLPPIRADYTAFEGYRYEPRPGDDSRPITCPIICLGGEEDGGAPRSDLEHWSSLTAAEFRLRMFGGGHFFLQGQGEQ 744
W++C + A +RL+C +AGG AS++ W +LP+ +EL A++LPG R KE + T +P++VE +A+AL+ + LD+PFA+FGHS G+L+ FEL R L++ + P +L +SGCR + P + L + L+D+L G PEE+ E++ LP RAD+T +E Y+Y+ P++CPI GG +D L+ W T F M G HFFLQ +Q
Sbjct: 10 WLICPQTAQQARLRLLCLPYAGGGASAYRSWQQQLPDTIELCAVQLPGHETRLKEQAYTHLPSLVEAMAEALLPV--LDRPFAIFGHSMGALLSFELTRYLRKHAQRSPEHLFLSGCRAAHL---PRTEPDVHTLSDEGLIDYLRRFNGTPEEILQNEEMMQLLLPIFRADFTLYETYQYQ-----HEEPLSCPITVFGGHQDSSVSYQQLQAWRDHTRGAFAAHMLPGNHFFLQPSRDQ 239
BLAST of mRNA_E_fasciculatus_S2_contig85.16631.1 vs.
Match: Thioesterase (n=1 Tax=Kamptonema sp. SIO1D9 TaxID=2607808 RepID=A0A6P1A9W5_9CYAN) HSP 1 Score: 184 bits (468), Expect = 3.200e-52 Identity = 97/241 (40.25%), Postives = 136/241 (56.43%), Query Frame = 1
Query: 4 SSSALEKWVVCRRVKPDASIRLICAAWAGGSASSFNKWTSKLPEAVELHALELPGRMRRSKEDSLTSVPAIVEGVAQALVAMGLLDKPFALFGHSFGSLVMFELARKLKEDIGKIPVYLIVSGCRPPDMCVGGGRSPPISQLPRDALVDHLIGLGGMPEELRDQTELVDYFLPPIRADYTAFEGYRYEPRPGDDSRPITCPIICLGGEEDGGAPRSDLEHWSSLTAAEFRLRMFGGGHFFL 726
++S WV C + P A +RL C +AGGSA SF W +LP +E+ +ELPGR R E T + +++ + +A++ L+KPFA FGHS G+++ FELA+ L ++ PV L VSG RPP + PP+ LP + L G PEE+ + EL++ FLP +RAD+ E Y Y P+P + CPI GG +D A SDL+ W LT A+F L MF G HFF+
Sbjct: 3 TTSTFNNWVTCPKPNPQAKLRLFCFHYAGGSALSFRTWADRLPNYIEVCPVELPGRGIRLMEPPFTRLQPLLQALEKAILPS--LNKPFAFFGHSMGAVLSFELAQLLAKNHHLSPVQLFVSGRRPPQI---PDPDPPLHNLPEATFLKELRRYNGTPEEVLNNAELMELFLPTLRADFAVLETYVYTPKPR-----LNCPISAFGGWDDWKASASDLQAWEELTNADFSLEMFPGDHFFI 233
BLAST of mRNA_E_fasciculatus_S2_contig85.16631.1 vs.
Match: Oleoyl-(Acyl-carrier-protein) (hydrolase n=1 Tax=Crinalium epipsammum PCC 9333 TaxID=1173022 RepID=K9VZS4_9CYAN) HSP 1 Score: 184 bits (467), Expect = 4.490e-52 Identity = 97/258 (37.60%), Postives = 144/258 (55.81%), Query Frame = 1
Query: 4 SSSALEKWVVCRRVKPDASIRLICAAWAGGSASSFNKWTSKLPEAVELHALELPGRMRRSKEDSLTSVPAIVEGVAQALVAMGLLDKPFALFGHSFGSLVMFELARKLKEDIGKIPVYLIVSGCRPPDMCVGGGRSPPISQLPRDALVDHLIGLGGMPEELRDQTELVDYFLPPIRADYTAFEGYRYEPRPGDDSRPITCPIICLGGEEDGGAPRSDLEHWSSLTAAEFRLRMFGGGHFFLQGQGEQAVLTFLGDVLT 777
S S + WV + P A++RL C +AGGS+ F W + LP+++E+ +ELPGR R E T + +VE +A +++ LDKPFA FGHS G+++ FEL R + G +PV+L+++G P + R PPI LP A + L GMP+++ + TEL++ FLP IRAD+ E Y Y P P++CPI GG +D ++LE W + T F L + G HFF+Q + +L + VLT
Sbjct: 5 SKSTIGAWVTFPQPNPQANLRLFCFPYAGGSSVIFRTWANNLPKSIEVCPIELPGRGSRFIETPFTRLDLLVEAIAPSILPY--LDKPFAFFGHSMGAVISFELTRLINRKYGLLPVHLLIAGRHAPQL---SDRHPPIHTLPEPAFIQGLCRYNGMPKQVLENTELMEVFLPIIRADFAICETYNYTNDP-----PLSCPITAFGGLQDSETSVAELEAWRNQTNNSFSLHLLPGDHFFIQSD-QLLLLQLISQVLT 251
BLAST of mRNA_E_fasciculatus_S2_contig85.16631.1 vs.
Match: Putative (thioesterase n=2 Tax=unclassified Desertifilum TaxID=2621682 RepID=A0A1E5QPU9_9CYAN) HSP 1 Score: 184 bits (467), Expect = 4.490e-52 Identity = 104/261 (39.85%), Postives = 139/261 (53.26%), Query Frame = 1
Query: 7 SSALEKWVVCRRVKPDASIRLICAAWAGGSASSFNKWTSKLPEAVELHALELPGRMRRSKEDSLTSVPAIVEGVAQALVAMGLLDKPFALFGHSFGSLVMFELARKLKEDIGKIPVYLIVSGCRPPDMCVGGGRSPPISQLPRDALVDHLIGLGGMPEELRDQTELVDYFLPPIRADYTAFEGYRYEPRPGDDSRPITCPIICLGGEEDGGAPRSDLEHWSSLTAAEFRLRMFGGGHFFLQGQGEQAVLTFLGDVLTEKLS 789
SS + W+ + P A +RL C +AGG A SF W+ LP VE+ +ELPGR R E T + ++E +A ALV KPFA GHS G+LV FELAR L+ ++P+YL++SG R P + PP+ LP L+ L G PE + EL+ LP +RAD++ E YRY+P P P+ CPI GG +D DLE W T F L+MF G HFFL + VL + D+L + LS
Sbjct: 2 SSQSKSWITYPQPNPRAKLRLFCFHYAGGGAVSFRNWSDALPSEVEVCPIELPGRGARLFEQPFTQLQPLIEALAVALVPH--CTKPFAFLGHSMGALVGFELARSLRRKGDRLPLYLLLSGHRAPQL---PDLDPPLHALPDAELLQELRRYNGTPEAVLQNAELMQLLLPTLRADFSVVETYRYQPEP-----PLDCPIFAFGGLQDWKVKPEDLEPWQQQTTQAFTLQMFPGDHFFLHAH-QSLVLRKVSDLLQQVLS 251
BLAST of mRNA_E_fasciculatus_S2_contig85.16631.1 vs.
Match: Putative (thioesterase n=1 Tax=Leptolyngbya boryana NIES-2135 TaxID=1973484 RepID=A0A1Z4JSL1_LEPBY) HSP 1 Score: 183 bits (465), Expect = 8.890e-52 Identity = 98/234 (41.88%), Postives = 137/234 (58.55%), Query Frame = 1
Query: 25 WVVCRRVKPDASIRLICAAWAGGSASSFNKWTSKLPEAVELHALELPGRMRRSKEDSLTSVPAIVEGVAQALVAMGLLDKPFALFGHSFGSLVMFELARKLKEDIGKIPVYLIVSGCRPPDMCVGGGRSPPISQLPRDALVDHLIGLGGMPEELRDQTELVDYFLPPIRADYTAFEGYRYEPRPGDDSRPITCPIICLGGEEDGGAPRSDLEHWSSLTAAEFRLRMFGGGHFFL 726
W++ + P A +RL C +AGGSAS F W+ +LP+ +E+ A+ELPGR + T + +VE +AQ+L+ L++PFALFGHS G+L+ FELAR L++ G P +L VSG P + R PPI LP A + L L G PE + EL+ P +RAD+ A + YRY+P P + CPI LGG +D R DLE W + T A F++++F G HFFL
Sbjct: 5 WIIRSKPNPQARLRLFCFPYAGGSASIFRSWSDQLPQNIEVCAVELPGRGTLMRLAPYTQLKPLVEAIAQSLLPN--LNQPFALFGHSMGALISFELARFLRQAYGLTPRHLFVSGRAAPYI---PDRDPPIYTLPDAAFIQELRRLNGTPEAVLQNQELMQLLTPILRADFAAIDTYRYQPEPA-----LGCPITALGGLQDLEVSRDDLEAWQTQTIAPFQIQLFLGNHFFL 228
BLAST of mRNA_E_fasciculatus_S2_contig85.16631.1 vs.
Match: thioesterase (II family protein n=1 Tax=Fischerella sp. PCC 9605 TaxID=1173024 RepID=UPI00047E576A) HSP 1 Score: 182 bits (462), Expect = 2.550e-51 Identity = 96/241 (39.83%), Postives = 134/241 (55.60%), Query Frame = 1
Query: 4 SSSALEKWVVCRRVKPDASIRLICAAWAGGSASSFNKWTSKLPEAVELHALELPGRMRRSKEDSLTSVPAIVEGVAQALVAMGLLDKPFALFGHSFGSLVMFELARKLKEDIGKIPVYLIVSGCRPPDMCVGGGRSPPISQLPRDALVDHLIGLGGMPEELRDQTELVDYFLPPIRADYTAFEGYRYEPRPGDDSRPITCPIICLGGEEDGGAPRSDLEHWSSLTAAEFRLRMFGGGHFFL 726
++S WV+C + P+A IRL C +AGGS++ F +W+ LP VE+ A+ELPGR + K + +VE +A L + LDKPFA FGHS G L+ FELA L++ +P +L VSG R P + + PPI LP ++ L L G P+ L + EL+ FLP +RAD+ E Y Y +P P+ CPI GG +D R +++ W T+A F L M G HFFL
Sbjct: 3 NTSNFNSWVICPKPNPNAKIRLFCFPYAGGSSNIFRRWSDNLPGTVEVCAIELPGRGMQMKLSPFNRLEPLVEELASVLKSN--LDKPFAFFGHSMGGLISFELACLLRKQYDMVPNHLYVSGRRAPQIA---DQKPPIYALPEAEFIEELRRLNGTPQALLENDELMQLFLPILRADFAVLETYVYTQKP-----PLDCPITAFGGLQDQEVSRENIQAWQEQTSASFSLHMLPGDHFFL 233
BLAST of mRNA_E_fasciculatus_S2_contig85.16631.1 vs.
Match: Thioesterase (n=3 Tax=Nostocales TaxID=1161 RepID=A0A1Z4J274_9CYAN) HSP 1 Score: 182 bits (461), Expect = 3.580e-51 Identity = 99/242 (40.91%), Postives = 132/242 (54.55%), Query Frame = 1
Query: 1 MSSSALEKWVVCRRVKPDASIRLICAAWAGGSASSFNKWTSKLPEAVELHALELPGRMRRSKEDSLTSVPAIVEGVAQALVAMGLLDKPFALFGHSFGSLVMFELARKLKEDIGKIPVYLIVSGCRPPDMCVGGGRSPPISQLPRDALVDHLIGLGGMPEELRDQTELVDYFLPPIRADYTAFEGYRYEPRPGDDSRPITCPIICLGGEEDGGAPRSDLEHWSSLTAAEFRLRMFGGGHFFL 726
M+S+ + WV C + P AS+RL C +AGGS+ F W+ LP VE+ +ELPGR + K + T + +V+ +A L+ LDKPFA FGHS G LV FEL R L+++ IP +L VSG R P + PPI LP + L L G PE + EL+ +P +RAD+ E Y Y P P+ CPI GG ED A +L+ W + T A F L+MF G HFFL
Sbjct: 1 MTSARIHSWVTCPQPNPQASLRLFCFPYAGGSSVIFRTWSRSLPTTVEVCPIELPGRGTQMKLPAFTQLQPLVQAIAPVLLPH--LDKPFAFFGHSMGGLVSFELVRLLRKEYNIIPDHLFVSGRRAPQI---PDPKPPIHALPEPEFKEELRRLNGTPEAVLQNAELMQLLVPILRADFAVLETYVYTTEP-----PLNCPISAYGGSEDEEASYDELQAWQNQTNAAFSLQMFTGDHFFL 232
BLAST of mRNA_E_fasciculatus_S2_contig85.16631.1 vs.
Match: thioesterase (II family protein n=1 Tax=Nostoc sp. LEGE 06077 TaxID=915325 RepID=UPI00188060A4) HSP 1 Score: 181 bits (458), Expect = 1.290e-50 Identity = 100/266 (37.59%), Postives = 141/266 (53.01%), Query Frame = 1
Query: 10 SALEKWVVCRRVKPDASIRLICAAWAGGSASSFNKWTSKLPEAVELHALELPGRMRRSKEDSLTSVPAIVEGVAQALVAMGLLDKPFALFGHSFGSLVMFELARKLKEDIGKIPVYLIVSGCRPPDMCVGGGRSPPISQLPRDALVDHLIGLGGMPEELRDQTELVDYFLPPIRADYTAFEGYRYEPRPGDDSRPITCPIICLGGEEDGGAPRSDLEHWSSLTAAEFRLRMFGGGHFFLQGQGEQAVLTFLGDVLTEKLS*RVALK 807
S+ W++C + P A++RL C +AGGS+ F +W+ LP +VE+ +ELPGR R+ K ++ A+V+ +A + LDKPFA FGHS G L FEL R L++ +PV+L +SG R P + PPI LP A ++ L L G P + + EL+ FLP +RAD+ E Y Y P P P+ CPI GG +D +L+ W T F L MF G HFFL + +LT L L ++ LK
Sbjct: 6 SSDNSWIICPKPNPLAALRLFCFPYAGGSSLIFRRWSDYLPFSVEVCTIELPGRGRQIKLPLCNNMDALVDAIASMIFPY--LDKPFAFFGHSMGGLFSFELTRLLRQKYNILPVHLFISGRRAPQI---PPVKPPIHNLPEPAFIEELRHLNGTPPAVLENAELMQLFLPILRADFAVLETYTYTPEP-----PLECPITVFGGLQDSEVDCHELQAWQEQTKTNFNLDMFPGDHFFLHS-AQYGLLTSLAKYLLVEIHQNQTLK 260 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig85.16631.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig85.16631.1 >prot_E_fasciculatus_S2_contig85.16631.1 ID=prot_E_fasciculatus_S2_contig85.16631.1|Name=mRNA_E_fasciculatus_S2_contig85.16631.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=264bp MSSSALEKWVVCRRVKPDASIRLICAAWAGGSASSFNKWTSKLPEAVELHback to top mRNA from alignment at E_fasciculatus_S2_contig85:30556..34412- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig85.16631.1 ID=mRNA_E_fasciculatus_S2_contig85.16631.1|Name=mRNA_E_fasciculatus_S2_contig85.16631.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=3857bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig85:30556..34412- (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig85:30556..34412- >mRNA_E_fasciculatus_S2_contig85.16631.1 ID=mRNA_E_fasciculatus_S2_contig85.16631.1|Name=mRNA_E_fasciculatus_S2_contig85.16631.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=792bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig85:30556..34412- (Ectocarpus fasciculatus EfasUO2)back to top |