prot_E_fasciculatus_S2_contig8444.16577.1 (polypeptide) Ectocarpus fasciculatus EfasUO2

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E_fasciculatus_S2_contig8444.16577.1
Unique Nameprot_E_fasciculatus_S2_contig8444.16577.1
Typepolypeptide
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Sequence length40
Homology
BLAST of mRNA_E_fasciculatus_S2_contig8444.16577.1 vs. uniprot
Match: D7G7C0_ECTSI (Conserved oligomeric Golgi complex subunit 8 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G7C0_ECTSI)

HSP 1 Score: 77.0 bits (188), Expect = 2.050e-15
Identity = 39/39 (100.00%), Postives = 39/39 (100.00%), Query Frame = 0
Query:    1 MDACVRSDLMEEALSIATFASTLERRHRSRRVVPSAPVG 39
            MDACVRSDLMEEALSIATFASTLERRHRSRRVVPSAPVG
Sbjct:  143 MDACVRSDLMEEALSIATFASTLERRHRSRRVVPSAPVG 181          
BLAST of mRNA_E_fasciculatus_S2_contig8444.16577.1 vs. uniprot
Match: A0A7S2V501_9STRA (Conserved oligomeric Golgi complex subunit 8 (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V501_9STRA)

HSP 1 Score: 48.9 bits (115), Expect = 1.670e-5
Identity = 26/40 (65.00%), Postives = 30/40 (75.00%), Query Frame = 0
Query:    1 MDACVRSDLMEEALSIATFASTLERRHRSRRVVPSAPVGR 40
            MDACVR+ L EEALSIA FASTLERRHR     P++  G+
Sbjct:   38 MDACVRNGLYEEALSIAQFASTLERRHRLPIAGPASASGK 77          
BLAST of mRNA_E_fasciculatus_S2_contig8444.16577.1 vs. uniprot
Match: A0A7S1UMN6_9STRA (Conserved oligomeric Golgi complex subunit 8 n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1UMN6_9STRA)

HSP 1 Score: 48.5 bits (114), Expect = 2.280e-5
Identity = 24/32 (75.00%), Postives = 28/32 (87.50%), Query Frame = 0
Query:    2 DACVRSDLMEEALSIATFASTLERRHRSRRVV 33
            DACVRS+L EEALSIA+FA+TLERRH  + VV
Sbjct:   93 DACVRSNLYEEALSIASFANTLERRHTDKNVV 124          
BLAST of mRNA_E_fasciculatus_S2_contig8444.16577.1 vs. uniprot
Match: A0A7S4AIA0_9STRA (Conserved oligomeric Golgi complex subunit 8 n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4AIA0_9STRA)

HSP 1 Score: 47.8 bits (112), Expect = 4.270e-5
Identity = 23/27 (85.19%), Postives = 25/27 (92.59%), Query Frame = 0
Query:    1 MDACVRSDLMEEALSIATFASTLERRH 27
            MDACVRS+L EEALSIA FA+TLERRH
Sbjct:  113 MDACVRSNLYEEALSIAAFANTLERRH 139          
BLAST of mRNA_E_fasciculatus_S2_contig8444.16577.1 vs. uniprot
Match: B5YMK7_THAPS (Conserved oligomeric Golgi complex subunit 8 n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B5YMK7_THAPS)

HSP 1 Score: 47.4 bits (111), Expect = 5.840e-5
Identity = 26/39 (66.67%), Postives = 28/39 (71.79%), Query Frame = 0
Query:    1 MDACVRSDLMEEALSIATFASTLERRHRSRRVVPSAPVG 39
            MDACVRS L E+ALSIA FA+TLERRH       SA VG
Sbjct:  137 MDACVRSSLYEDALSIAGFANTLERRHLMETSGASAAVG 175          
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig8444.16577.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D7G7C0_ECTSI2.050e-15100.00Conserved oligomeric Golgi complex subunit 8 n=2 T... [more]
A0A7S2V501_9STRA1.670e-565.00Conserved oligomeric Golgi complex subunit 8 (Frag... [more]
A0A7S1UMN6_9STRA2.280e-575.00Conserved oligomeric Golgi complex subunit 8 n=1 T... [more]
A0A7S4AIA0_9STRA4.270e-585.19Conserved oligomeric Golgi complex subunit 8 n=1 T... [more]
B5YMK7_THAPS5.840e-566.67Conserved oligomeric Golgi complex subunit 8 n=1 T... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig8444contigE_fasciculatus_S2_contig8444:6280..6399 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO22022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig8444.16577.1mRNA_E_fasciculatus_S2_contig8444.16577.1Ectocarpus fasciculatus EfasUO2mRNAE_fasciculatus_S2_contig8444 6250..6399 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E_fasciculatus_S2_contig8444.16577.1 ID=prot_E_fasciculatus_S2_contig8444.16577.1|Name=mRNA_E_fasciculatus_S2_contig8444.16577.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=40bp
MDACVRSDLMEEALSIATFASTLERRHRSRRVVPSAPVGR
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