prot_E_fasciculatus_S2_contig8367.16500.1 (polypeptide) Ectocarpus fasciculatus EfasUO2

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E_fasciculatus_S2_contig8367.16500.1
Unique Nameprot_E_fasciculatus_S2_contig8367.16500.1
Typepolypeptide
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Sequence length101
Homology
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BLAST of mRNA_E_fasciculatus_S2_contig8367.16500.1 vs. uniprot
Match: A0A6H5K9M4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9M4_9PHAE)

HSP 1 Score: 110 bits (275), Expect = 2.790e-26
Identity = 64/99 (64.65%), Postives = 68/99 (68.69%), Query Frame = 0 
Query:    1 MPQRPNMPDCYAFVKNGCCRFLQNCRYHHPYDRLGMPVPDSAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALDAIIGVQDRAPCDVFLNVSFC 99
            MPQRPNMP+C+ FVKNGCCRFL NCRYHHPYDRLGM   DSA XXXXXXXXXXXX                      +DAIIGVQDRAPCD+FLN   C
Sbjct:  181 MPQRPNMPECHGFVKNGCCRFLHNCRYHHPYDRLGMATQDSAGXXXXXXXXXXXXSHENVGGGS------------GVDAIIGVQDRAPCDMFLNSGHC 267
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BLAST of mRNA_E_fasciculatus_S2_contig8367.16500.1 vs. uniprot
Match: A0A251PCN7_PRUPE (C3H1-type domain-containing protein n=1 Tax=Prunus persica TaxID=3760 RepID=A0A251PCN7_PRUPE)

HSP 1 Score: 48.9 bits (115), Expect = 1.760e-5
Identity = 15/36 (41.67%), Postives = 24/36 (66.67%), Query Frame = 0 
Query:    1 MPQRPNMPDCYAFVKNGCCRFLQNCRYHHPYDRLGM 36
            +P+RP  P C  F + G C+F+ NC+YHHP ++  +
Sbjct:   31 LPERPGQPACIYFSRTGDCKFISNCKYHHPKNQTAL 66
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BLAST of mRNA_E_fasciculatus_S2_contig8367.16500.1 vs. uniprot
Match: UPI00092F3253 (zinc finger CCCH domain-containing protein 37-like isoform X1 n=2 Tax=Lupinus angustifolius TaxID=3871 RepID=UPI00092F3253)

HSP 1 Score: 50.8 bits (120), Expect = 3.930e-5
Identity = 17/32 (53.12%), Postives = 24/32 (75.00%), Query Frame = 0 
Query:    2 PQRPNMPDCYAFVKNGCCRFLQNCRYHHPYDR 33
            PQRP   +C  ++KNG C+FL+ C++HHP DR
Sbjct:  375 PQRPGQIECDYYMKNGVCKFLERCKFHHPIDR 406
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BLAST of mRNA_E_fasciculatus_S2_contig8367.16500.1 vs. uniprot
Match: M5WFE3_PRUPE (Uncharacterized protein (Fragment) n=1 Tax=Prunus persica TaxID=3760 RepID=M5WFE3_PRUPE)

HSP 1 Score: 48.9 bits (115), Expect = 5.660e-5
Identity = 15/36 (41.67%), Postives = 24/36 (66.67%), Query Frame = 0 
Query:    1 MPQRPNMPDCYAFVKNGCCRFLQNCRYHHPYDRLGM 36
            +P+RP  P C  F + G C+F+ NC+YHHP ++  +
Sbjct:   40 LPERPGQPACIYFSRTGDCKFISNCKYHHPKNQTAL 75
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BLAST of mRNA_E_fasciculatus_S2_contig8367.16500.1 vs. uniprot
Match: A0A6J5XJ21_PRUAR (C3H1-type domain-containing protein n=1 Tax=Prunus armeniaca TaxID=36596 RepID=A0A6J5XJ21_PRUAR)

HSP 1 Score: 48.9 bits (115), Expect = 5.930e-5
Identity = 15/36 (41.67%), Postives = 24/36 (66.67%), Query Frame = 0 
Query:    1 MPQRPNMPDCYAFVKNGCCRFLQNCRYHHPYDRLGM 36
            +P+RP  P C  F + G C+F+ NC+YHHP ++  +
Sbjct:   31 LPERPGQPACIYFSRTGDCKFISNCKYHHPKNQTAL 66
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig8367.16500.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A6H5K9M4_9PHAE2.790e-2664.65Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A251PCN7_PRUPE1.760e-541.67C3H1-type domain-containing protein n=1 Tax=Prunus... [more]
UPI00092F32533.930e-553.13zinc finger CCCH domain-containing protein 37-like... [more]
M5WFE3_PRUPE5.660e-541.67Uncharacterized protein (Fragment) n=1 Tax=Prunus ... [more]
A0A6J5XJ21_PRUAR5.930e-541.67C3H1-type domain-containing protein n=1 Tax=Prunus... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000571Zinc finger, CCCH-typePROSITEPS50103ZF_C3H1coord: 4..32
score: 12.155
IPR036855Zinc finger, CCCH-type superfamilySUPERFAMILY90229CCCH zinc fingercoord: 7..35

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig8367contigE_fasciculatus_S2_contig8367:4611..6143 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO22022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig8367.16500.1mRNA_E_fasciculatus_S2_contig8367.16500.1Ectocarpus fasciculatus EfasUO2mRNAE_fasciculatus_S2_contig8367 4611..6143 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E_fasciculatus_S2_contig8367.16500.1 ID=prot_E_fasciculatus_S2_contig8367.16500.1|Name=mRNA_E_fasciculatus_S2_contig8367.16500.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=101bp
MPQRPNMPDCYAFVKNGCCRFLQNCRYHHPYDRLGMPVPDSAAGGGGGGG
GGGPQRGSSSSHHSHENGGNGGGGGGALDAIIGVQDRAPCDVFLNVSFCF
*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036855Znf_CCCH_sf
IPR000571Znf_CCCH