mRNA_E_fasciculatus_S2_contig8310.16456.1 (mRNA) Ectocarpus fasciculatus EfasUO2

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E_fasciculatus_S2_contig8310.16456.1
Unique NamemRNA_E_fasciculatus_S2_contig8310.16456.1
TypemRNA
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Homology
BLAST of mRNA_E_fasciculatus_S2_contig8310.16456.1 vs.
Match: Protein (kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LH97_9PHAE)

HSP 1 Score: 724 bits (1868), Expect = 2.930e-255
Identity = 451/618 (72.98%), Postives = 467/618 (75.57%), Query Frame = 1
Query:    7 WPSLSLPHRRELPPNERSSMKRTIDLLQGLKHDHVLGVRRYWDASRAGPKERQSRSLPWQSGETSAGEGERVVFLTTPCTTLEAFVDTKVEFLRWRVVKRWSRQILEALLFLHDQSPPVVH-----NTIYIDPSKSHLFVGGVCDIVAPPPVTRSKGRLSSNGSXXXXXXXXXPRSWGNKAWGLVSGGGMSCGLDSADNDRHVGKEGGEPSAAPEGEXXXXXXXXXXXX--DGTARDVRAFGTVLIEMILKRRLDPALAEDERFLEMLFVFSGWPESVVDLLRSCRAPINERPSAEQLLRHPFLELGNDLDDEAVYGDPTLVAGAFAAVHGHEGFAHQPTPGASSLPVPLCPA--GNGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYGHHTPSCVSTESPSPSSPSAAPSFGGVPTVPSPATAAMSAA----AVGPFASPGGFGPYLDAAAXXXXXXGYGFDRGEDFSSLLPAGVTLAAYENVQAIAARMQQAAHPYSGPGAAAPFHHHPTNGYDDDGRG-ERVGRNRSASAG-GMPGGGSRSEDXXXXXXXXXXXXXXXXXXXXXXGGVASTGRPRSASEDAVWDMLPSDESQCRRPFSVSAVEGRHGY 1815
            W  L+L   RELPP ERS+MKR++DLLQ LKHDHVLGVRRYWDAS AGP ERQSR+LPWQSGETSA EGERVVFLTTPCTTLEAFVDTKVEFLRWRVVKRWS+QIL+ALLFLHD SPPVVH     +TIYIDPSKSHLFVGGVC+IVAPPP TRSKG L S+GS         P SWGNKAWGLVSGGGM+CGLDSAD+                  XXXXXXXXXXXX  DG ARDVR FGTV+IEMILKRRLDPALAEDERFLEML VFSGWPE+VVDLLRSCRAPINERPSAEQLLRHPFLELGNDLDDEAVYGDPTLVA AFAAVHGH GFAHQ  PGAS LPVPLCPA  G GS                       XXXXXXXX       HTPSCVSTESPSPSSPSAAPSFGGVPTVPSP T          A GPFAS GG G Y   A   XXX GYG D GEDFSS LPAGVT AAY N +AIAARMQ AAHPYS P  AAPFHH PTN YDDDG+G ER GRNRSASAG  M  GGSRSED                XXXXXX G    GRPRSASEDAVWDMLPSDESQCRRPFSVSAVEGRHGY
Sbjct:   35 WNELNL---RELPPKERSAMKRSVDLLQELKHDHVLGVRRYWDASPAGPVERQSRTLPWQSGETSAEEGERVVFLTTPCTTLEAFVDTKVEFLRWRVVKRWSQQILKALLFLHDHSPPVVHKNLSLSTIYIDPSKSHLFVGGVCNIVAPPPATRSKGMLCSSGSGGGVVGGG-PMSWGNKAWGLVSGGGMNCGLDSADDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGRARDVRGFGTVVIEMILKRRLDPALAEDERFLEMLSVFSGWPEAVVDLLRSCRAPINERPSAEQLLRHPFLELGNDLDDEAVYGDPTLVAAAFAAVHGHGGFAHQLPPGAS-LPVPLCPARCGGGSGTTWSNTPTSSTDFAAWSSSCGGXXXXXXXX-------HTPSCVSTESPSPSSPSAAPSFGGVPTVPSPPTMXXXXXXXXXAAGPFASQGGLGSYT--AGGGXXXRGYGLDWGEDFSSHLPAGVTPAAYANAKAIAARMQHAAHPYSNPAGAAPFHH-PTNVYDDDGQGGERGGRNRSASAGRDMRSGGSRSEDTGIGGYGFGVSQREEGXXXXXXXG----GRPRSASEDAVWDMLPSDESQCRRPFSVSAVEGRHGY 633          
BLAST of mRNA_E_fasciculatus_S2_contig8310.16456.1 vs.
Match: Protein (kinase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPS4_ECTSI)

HSP 1 Score: 702 bits (1812), Expect = 4.930e-246
Identity = 445/621 (71.66%), Postives = 458/621 (73.75%), Query Frame = 1
Query:    7 WPSLSLPHRRELPPNERSSMKRTIDLLQGLKHDHVLGVRRYWDASRAGPKERQSRSLPWQSGETSAGEGERVVFLTTPCTTLEAFVDTKVEFLRWRVVKRWSRQILEALLFLHDQSPPVVHNTIYIDPSKSHLFVGGVCDIVAPPPVTRSKGRLSSNGSXXXXXXXXXPRSWGNKAWGLVSGGGMSCGLDSA---DNDRHVGKEGGEPSAAPEGEXXXXXXXXXXXXDGTARDVRAFGTVLIEMILKRRLDPALAEDERFLEMLFVFSGWPESVVDLLRSCRAPINE----------RPSAEQLLRHPFLELGNDLDDEAVYGDPTLVAGAFAAVHGHEGFAHQPTPGASSLPVPLCPAGNGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYGHHTPSCVSTESPSPSSPSAAPSFGGVPTVPSPATAAMS---AAAVGPFASPGGFGPYLDAAAXXXXXXGYGFDRGEDFSSLLPAGVTLAAYENVQAIAARMQQAAHPYSGPGAAAPFHHHPTNGYDDDGRGE-RVGRNRSASAG-GMPGGGSRSEDXXXXXXXXXXXXXXXXXXXXXXGGVASTGRPRSASEDAVWDMLPSDESQCRRPFSVSAVEGRHGY 1815
            W  L+L   RELPP+ERSSMKRTIDLLQGLKHDHVLGVRRYW+ASRAGP ERQSR+LPWQSGETSAGEGERVVFLTTPCTTLEAFVDTKVEFLRWRVVKRWSRQILEALLFLHDQSPPVVHNTIYIDPSK+HLFVGGVCDI AP               XXXXXXXXXP +WGNKAWGLVSGGGM+CGL SA                       XXXXXXXXXXXXDG ARDVR FGTV+IEMILK RLDPALAEDERFLEML VFSGWPESVVDLLRSCRAPINE          RPSAEQLLRHPFLELGNDLDDEAVYGDPTLVA AFAAVHGH GFAHQ  PGAS LPVPLCPA  G                         XX         +GHHTPSCVSTESPSPSSPSAAPSFGGVPTVPS          +AAVGPFAS GG GPY +         G G    EDFSSLLPAGVT  AY N +AIAARMQ AAHPYS    AAPFHH PTN YDDDG+GE RVGRNRSASAG GM  GGSRSED             XXXXXXXXX      GRPRSASEDAVWDMLPSDESQCRRPFSVSAVEGRHGY
Sbjct:   86 WNELNL---RELPPDERSSMKRTIDLLQGLKHDHVLGVRRYWEASRAGPAERQSRALPWQSGETSAGEGERVVFLTTPCTTLEAFVDTKVEFLRWRVVKRWSRQILEALLFLHDQSPPVVHNTIYIDPSKNHLFVGGVCDIAAP--XXXXXXXXXXXXXXXXXXXXXXPMNWGNKAWGLVSGGGMNCGLHSAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGRARDVRGFGTVVIEMILKGRLDPALAEDERFLEMLSVFSGWPESVVDLLRSCRAPINEPSLIKRYNFQRPSAEQLLRHPFLELGNDLDDEAVYGDPTLVAAAFAAVHGHGGFAHQLLPGAS-LPVPLCPARCGGGGGTTCSNTPTSSTDFAAWSSCGGXXAG-------HGHHTPSCVSTESPSPSSPSAAPSFGGVPTVPSSXXXXXXXXMSAAVGPFASQGGLGPYTNGG-------GGGGSGYEDFSSLLPAGVTPTAYANAKAIAARMQHAAHPYSNGAGAAPFHH-PTNVYDDDGQGEERVGRNRSASAGEGMRSGGSRSEDTGIGGYGFGVSQRXXXXXXXXX----XXGRPRSASEDAVWDMLPSDESQCRRPFSVSAVEGRHGY 681          
BLAST of mRNA_E_fasciculatus_S2_contig8310.16456.1 vs.
Match: Protein (kinase domain-containing protein n=3 Tax=Phytophthora TaxID=4783 RepID=A0A421FJA9_9STRA)

HSP 1 Score: 70.5 bits (171), Expect = 2.340e-9
Identity = 40/128 (31.25%), Postives = 69/128 (53.91%), Query Frame = 1
Query:   40 LPPNERSSMKRTIDLLQGLKHDHVLGVRRYWDASRAGPKERQSRSLPWQSGETSAGEGERVVFLTTPCT--TLEAFVDTKVEFLRWRVVKRWSRQILEALLFLHDQSPPVVHNTIYIDPSKSHLFVGG 417
            LP  E++ + + + LLQ L+H +++     W +                       E  +VVF+T   T  TL++++  +V+F++W+++KRW  QILE L +LH+QSPPV+H  +  D    ++FV G
Sbjct:   62 LPTTEKTRIIQEVQLLQKLEHKNIINFYGSWFSK----------------------EKNQVVFITEIMTSGTLKSYIK-RVQFIKWKIIKRWCIQILEGLHYLHNQSPPVIHRDLKCD----NIFVNG 162          
BLAST of mRNA_E_fasciculatus_S2_contig8310.16456.1 vs.
Match: Protein (kinase domain-containing protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y9K5_AURAN)

HSP 1 Score: 68.6 bits (166), Expect = 2.970e-9
Identity = 40/134 (29.85%), Postives = 71/134 (52.99%), Query Frame = 1
Query:   34 RELPPNERSSMKRTIDLLQGLKHDHVLGVRRYWDASRAGPKERQSRSLPWQSGETSAGEGERVVFLTTPCTT--LEAFVDTKVEFLRWRVVKRWSRQILEALLFLHDQSPPVVHN-----TIYIDPSKSHLFVG 414
            + +PPNE++ +   + LL  L+H++++     W                      +   GE V F+T   ++  L+ F++ KV+ +RW+++KRW RQIL+AL +LH Q+PP++H       I+I+ S   L +G
Sbjct:   19 KTMPPNEKARVINEVRLLDRLEHENIIDFHGSW---------------------VNRERGE-VCFITEILSSGSLKKFIN-KVQVVRWKIIKRWVRQILKALAYLHSQTPPIIHRDIKCENIFINGSTGDLRIG 129          
BLAST of mRNA_E_fasciculatus_S2_contig8310.16456.1 vs.
Match: Protein (kinase domain-containing protein n=1 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RMH2_9STRA)

HSP 1 Score: 70.5 bits (171), Expect = 6.120e-9
Identity = 40/128 (31.25%), Postives = 69/128 (53.91%), Query Frame = 1
Query:   40 LPPNERSSMKRTIDLLQGLKHDHVLGVRRYWDASRAGPKERQSRSLPWQSGETSAGEGERVVFLTTPCT--TLEAFVDTKVEFLRWRVVKRWSRQILEALLFLHDQSPPVVHNTIYIDPSKSHLFVGG 417
            LP  E++ + + + LLQ L+H +++     W +                       E  +VVF+T   T  TL++++  +V+F++W+++KRW  QILE L +LH+QSPPV+H  +  D    ++FV G
Sbjct:   62 LPSTEKTRIIQEVQLLQKLEHKNIINFYGSWFSK----------------------EKNQVVFITEIMTSGTLKSYIK-RVQFIKWKIIKRWCIQILEGLHYLHNQSPPVIHRDLKCD----NIFVNG 162          
BLAST of mRNA_E_fasciculatus_S2_contig8310.16456.1 vs.
Match: Hypothetical (protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JUI1_9STRA)

HSP 1 Score: 70.1 bits (170), Expect = 9.810e-9
Identity = 80/310 (25.81%), Postives = 126/310 (40.65%), Query Frame = 1
Query:   34 RELPPNERSSMKRTIDLLQGLKHDHVLGVRRYWDASRAGPKERQSRSLPWQSGETSAGEGERVVFLTTPCTT--LEAFVDTKVEFLRWRVVKRWSRQILEALLFLHDQSPPVVHNTIYIDPSKSHLFVGGVCDIVAPPPVTRSKGRLSSNGSXXXXXXXXXPRSWGNKAWGLVSGGGMSCGLDSADNDRHVGKEGGEPSAAPEGEXXXXXXXXXXXXDGTARDVRAFGTVLIEMILKRR-LDPALAEDERFLEMLFVFSGWPESVVD------LLRSCRA--PINERPSAEQLLRHPFLELGNDLDDEAV 930
            + LP  E++ +   + LL  L+H++++     W                      +  +GE VVF+T   ++  L+ F++ KV+ +RW++VKRW +QIL+AL +LH Q PP++H  I  D    ++F+ G            S G L                                 GL +    R  G +G      PE              D    D+ AFG  +IEMI K+   D      + + ++    +    + +D       +RSC A  P  ER SA QLL+HPFL+   D D+  V
Sbjct:   81 KNLPAAEKARVINEVRLLDRLEHENIIDFHGSW---------------------VNREKGE-VVFVTEILSSGSLKRFIN-KVKLIRWKIVKRWCKQILKALAYLHSQDPPIIHRDIKCD----NIFING------------STGDLRIG----------------------------DLGLSTTVTLRPPGTKGQSVLGTPE---FMAPELYEESYDEKV-DIYAFGMCVIEMITKQLPYDECANATQIYRKVTNNIAPLAFNFIDNILAKEFIRSCVAAHPF-ERFSAAQLLQHPFLQSDTDFDETEV 318          
BLAST of mRNA_E_fasciculatus_S2_contig8310.16456.1 vs.
Match: Serine/threonine (protein kinase n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225X176_9STRA)

HSP 1 Score: 69.3 bits (168), Expect = 1.580e-8
Identity = 39/128 (30.47%), Postives = 68/128 (53.12%), Query Frame = 1
Query:   40 LPPNERSSMKRTIDLLQGLKHDHVLGVRRYWDASRAGPKERQSRSLPWQSGETSAGEGERVVFLTTPCT--TLEAFVDTKVEFLRWRVVKRWSRQILEALLFLHDQSPPVVHNTIYIDPSKSHLFVGG 417
            LP  E++ + + + LLQ L+H +++     W +                       E  +VVF+T   T  TL++++  +V+F++W+++KRW  QILE L +LH Q+PPV+H  +  D    ++FV G
Sbjct:   61 LPSTEKTRIIQEVQLLQKLEHKNIINFYGSWFSK----------------------EKNQVVFITEIMTSGTLKSYIK-RVQFIKWKIIKRWCLQILEGLHYLHSQNPPVIHRDLKCD----NIFVNG 161          
BLAST of mRNA_E_fasciculatus_S2_contig8310.16456.1 vs.
Match: Protein (kinase domain-containing protein n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VCW2_9STRA)

HSP 1 Score: 69.3 bits (168), Expect = 1.640e-8
Identity = 39/128 (30.47%), Postives = 69/128 (53.91%), Query Frame = 1
Query:   40 LPPNERSSMKRTIDLLQGLKHDHVLGVRRYWDASRAGPKERQSRSLPWQSGETSAGEGERVVFLTTPCT--TLEAFVDTKVEFLRWRVVKRWSRQILEALLFLHDQSPPVVHNTIYIDPSKSHLFVGG 417
            LP  E++ + + + LLQ L+H +++     W +                       E  +VVF+T   T  TL++++  +V+F++W+++KRW  QILE L +LH+Q+PPV+H  +  D    ++FV G
Sbjct:   61 LPSTEKTRIIQEVQLLQKLEHKNIINFYGSWFSK----------------------EKNQVVFITEIMTSGTLKSYIK-RVQFIKWKIIKRWCIQILEGLHYLHNQNPPVIHRDLKCD----NIFVNG 161          
BLAST of mRNA_E_fasciculatus_S2_contig8310.16456.1 vs.
Match: Protein (kinase domain-containing protein n=1 Tax=Phytophthora nicotianae TaxID=4790 RepID=A0A0W8DIG9_PHYNI)

HSP 1 Score: 68.9 bits (167), Expect = 1.660e-8
Identity = 39/128 (30.47%), Postives = 68/128 (53.12%), Query Frame = 1
Query:   40 LPPNERSSMKRTIDLLQGLKHDHVLGVRRYWDASRAGPKERQSRSLPWQSGETSAGEGERVVFLTTPCT--TLEAFVDTKVEFLRWRVVKRWSRQILEALLFLHDQSPPVVHNTIYIDPSKSHLFVGG 417
            LP  E++ + + + LLQ L+H +++     W +                       E  +VVF+T   T  TL++++  +V+F++W+++KRW  QILE L +LH Q+PPV+H  +  D    ++FV G
Sbjct:   61 LPSTEKTRIIQEVQLLQKLEHKNIINFYGSWFSK----------------------EKNQVVFITEIMTSGTLKSYIK-RVQFIKWKIIKRWCIQILEGLHYLHSQNPPVIHRDLKCD----NIFVNG 161          
BLAST of mRNA_E_fasciculatus_S2_contig8310.16456.1 vs.
Match: Protein (kinase domain-containing protein n=4 Tax=Phytophthora TaxID=4783 RepID=G4ZGR4_PHYSP)

HSP 1 Score: 68.9 bits (167), Expect = 2.070e-8
Identity = 39/128 (30.47%), Postives = 68/128 (53.12%), Query Frame = 1
Query:   40 LPPNERSSMKRTIDLLQGLKHDHVLGVRRYWDASRAGPKERQSRSLPWQSGETSAGEGERVVFLTTPCT--TLEAFVDTKVEFLRWRVVKRWSRQILEALLFLHDQSPPVVHNTIYIDPSKSHLFVGG 417
            LP  E++ + + + LLQ L+H +++     W +                       E  +VVF+T   T  TL++++  +V+F++W+++KRW  QILE L +LH Q+PPV+H  +  D    ++FV G
Sbjct:   61 LPSTEKTRIIQEVQLLQKLEHKNIINFYGSWFSK----------------------EKNQVVFITEIMTSGTLKSYIK-RVQFIKWKIIKRWCIQILEGLHYLHSQNPPVIHRDLKCD----NIFVNG 161          
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig8310.16456.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Protein2.930e-25572.98kinase domain-containing protein n=1 Tax=Ectocarpu... [more]
Protein4.930e-24671.66kinase domain-containing protein n=1 Tax=Ectocarpu... [more]
Protein2.340e-931.25kinase domain-containing protein n=3 Tax=Phytophth... [more]
Protein2.970e-929.85kinase domain-containing protein (Fragment) n=1 Ta... [more]
Protein6.120e-931.25kinase domain-containing protein n=1 Tax=Phytophth... [more]
Hypothetical9.810e-925.81protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 ... [more]
Serine/threonine1.580e-830.47protein kinase n=1 Tax=Phytophthora megakarya TaxI... [more]
Protein1.640e-830.47kinase domain-containing protein n=2 Tax=Peronospo... [more]
Protein1.660e-830.47kinase domain-containing protein n=1 Tax=Phytophth... [more]
Protein2.070e-830.47kinase domain-containing protein n=4 Tax=Phytophth... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig8310contigE_fasciculatus_S2_contig8310:677..4750 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score711.4
Seed ortholog evalue3.5e-202
Seed eggNOG ortholog2880.D7FPS4
Model size1818
KEGG koko:K08867,ko:K12189
KEGG Pathwayko04144,map04144
KEGG ModuleM00410
Hectar predicted targeting categoryother localisation
Exons6
EggNOG free text desc.protein serine/threonine kinase activity
EggNOG OGsKOG0584@1,KOG0584@2759
EC2.7.11.1
Cds size1818
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01001,ko01009,ko04131,ko04147
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig8310.16456.1prot_E_fasciculatus_S2_contig8310.16456.1Ectocarpus fasciculatus EfasUO2polypeptideE_fasciculatus_S2_contig8310 677..4750 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842491.5563738-CDS-E_fasciculatus_S2_contig8310:676..8081696842491.5563738-CDS-E_fasciculatus_S2_contig8310:676..808Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8310 677..808 +
1696842491.5691738-CDS-E_fasciculatus_S2_contig8310:1266..14071696842491.5691738-CDS-E_fasciculatus_S2_contig8310:1266..1407Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8310 1267..1407 +
1696842491.5800853-CDS-E_fasciculatus_S2_contig8310:1833..19311696842491.5800853-CDS-E_fasciculatus_S2_contig8310:1833..1931Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8310 1834..1931 +
1696842491.5934334-CDS-E_fasciculatus_S2_contig8310:2628..29941696842491.5934334-CDS-E_fasciculatus_S2_contig8310:2628..2994Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8310 2629..2994 +
1696842491.6091394-CDS-E_fasciculatus_S2_contig8310:3219..33401696842491.6091394-CDS-E_fasciculatus_S2_contig8310:3219..3340Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8310 3220..3340 +
1696842491.622379-CDS-E_fasciculatus_S2_contig8310:3790..47501696842491.622379-CDS-E_fasciculatus_S2_contig8310:3790..4750Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8310 3791..4750 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E_fasciculatus_S2_contig8310.16456.1

>prot_E_fasciculatus_S2_contig8310.16456.1 ID=prot_E_fasciculatus_S2_contig8310.16456.1|Name=mRNA_E_fasciculatus_S2_contig8310.16456.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=606bp
MWWPSLSLPHRRELPPNERSSMKRTIDLLQGLKHDHVLGVRRYWDASRAG
PKERQSRSLPWQSGETSAGEGERVVFLTTPCTTLEAFVDTKVEFLRWRVV
KRWSRQILEALLFLHDQSPPVVHNTIYIDPSKSHLFVGGVCDIVAPPPVT
RSKGRLSSNGSGGGGGGGGGPRSWGNKAWGLVSGGGMSCGLDSADNDRHV
GKEGGEPSAAPEGEEEVVEEEEEEEEDGTARDVRAFGTVLIEMILKRRLD
PALAEDERFLEMLFVFSGWPESVVDLLRSCRAPINERPSAEQLLRHPFLE
LGNDLDDEAVYGDPTLVAGAFAAVHGHEGFAHQPTPGASSLPVPLCPAGN
GSGGGGTTCSNTPTSSTDCPAWSSSSCGGGGGGVGGGYGHHTPSCVSTES
PSPSSPSAAPSFGGVPTVPSPATAAMSAAAVGPFASPGGFGPYLDAAAAA
AGGGGYGFDRGEDFSSLLPAGVTLAAYENVQAIAARMQQAAHPYSGPGAA
APFHHHPTNGYDDDGRGERVGRNRSASAGGMPGGGSRSEDAGIGGYGFGL
SQREEGGLGEGGGGVASTGRPRSASEDAVWDMLPSDESQCRRPFSVSAVE
GRHGY*
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mRNA from alignment at E_fasciculatus_S2_contig8310:677..4750+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E_fasciculatus_S2_contig8310.16456.1 ID=mRNA_E_fasciculatus_S2_contig8310.16456.1|Name=mRNA_E_fasciculatus_S2_contig8310.16456.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=4074bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig8310:677..4750+ (Ectocarpus fasciculatus EfasUO2)
ATGTGGTGGCCGTCCCTTTCTCTGCCCCACCGCAGAGAGTTGCCGCCCAA TGAGAGAAGTTCGATGAAGAGGACCATCGACCTTCTACAGGGATTGAAGC ACGACCATGTCCTGGGGGTGCGCCGCTACTGGGTGAGACGAACAAGAGGG GGGCACGACGCTGGTAACGGTCGGGGAGGGGTGGGAGTAGGGGGAGACAG GACAGGGCAGGCAGAGAGACGTCGTCGGAAGGTGTGAGGACAGCGGTACA AATGCCGCTCGATGGCGACGTACACCTCGCCCACGCGAGCACCACTCTAG CGCCTTCGCCAGGCCGCACCAACCTATGTTCCTAACGCTTCCTTGTGGTT GATGTCGCCCTCGCCCCCCCCCCCCCCCCCCCCCGCGCCGGACGCCTGCG GGCGCGGCCCCCCAGACGCCGACCCCCCCGCCCCCCCCTTCGCCGCCGGG GGGGGGGGGCCCGGGGGGGGGGGNNNNNNNNNNCCCCAAATTTACCCCCT TTCCCCCCCCCCCCCCCTTCCCTTTTTTTTTCCTAACCCTTCCTTGTGGT TGTTGTCCCCCCCCCCCCCCCCCCCCCCCCCTTGCGGCAGGACGCTTCGA GAGCCGGCCCGAAAGAGCGACAGTCCCGATCGCTGCCTTGGCAGTCGGGG GAGACATCGGCCGGGGAGGGGGAGCGCGTGGTCTTCCTGACCACGCCGTG TACAACGCTGGAGGCCTTCGTGGACACCAAGGTAAGGTGGTCCGACTCTG GGGCAGGAGGAAGAGTTGTCGACAGCTACATCTAAGACGGCCGGGTGTAT AGTAGAAGGGCGCCGCATGTATCGCCAGGTCCTGGTGACTCCAAGGCCTC GTCGCGTGATGGGCGGGAGTGCGTGTGTGGGGTGTGGAATTCACGGGGCC CTCTGCCGCGCTCAGCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC CCTCCTCCCCCCCCCCTCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC TCCCCCCCCCCCCCNNNNNNNNNCCGGTGGCGGGGGGGGGGGGGGGTGGG GGGGTGGTTTGGGTGTTCCGGCGCCCGCCCCCCCCCCCCCCCCCCCCCCC CCCCCCCCCCCCCCTCACCGCGCCGTTTGTTCCCCCCTTACCGCCCATCC TCTGCAGGTGGAGTTCCTTCGCTGGCGCGTGGTGAAGCGATGGAGCCGAC AGATTCTGGAGGCGTTGTTGTTCCTTCACGATCAGTCCCCTCCTGTGGTA CACAAGTGAGTTGTGGTTTTTATTGCCTCTAGTTGCGCCGCTTCATGTGC GTGTGTGCTCACGTGCTGCTCCAGTTTCTGCTTTAGCTCCCTCCGCGGCG GTGTCTTTGCCTCTAAGTTTCGAGCGCTAGGATGCTCACGTCCGACGGGC GTGGGGGGGGGAGGGGAGGGAGGTTTCCAAACGTTTTTTCCTCATCAGCC CGATCAGCTATTGTTGATGGCAGCGAAGATCAGCTTTTGTTGATGGCAGC GAAGAAATATACCCACACCCCCTCCATTGGTATGATGAGAGGTCGTGTGT ATCATCCCAAACCCCAACCCTAACCCTACAGGCAGTTGTTAGCTATGCGG CAACCAGGTAGCGCCCCTCCTCCCTCCCTAGGAAGGAACGATTGGCCATC GGTGATCGGTCCTGTGGGAGCAATGCTCCGTCCTCTCGAGGACGCGTGGT CAATGGTCTAGCGACTAAGCATGCAAAACATAAGAGTACGCCCACCCCCC CCCCCCCCCCCCCCCTTCGTCCCAAACTTCCCCCCCCCCCCCCCCCCCCC ACCCCNNNNNNNNNNGGGACTGGGCCTGGGGGGAAAAATCCCCCCTCCTT CCGGGGCCGTGGGTCAAATGGTTACAGAAAAAAAAATAAAAAAAAAAAAA GTCCCCCCCCCCCCCCCCCCCCCCTGCCGTGTTGCAGAAACTTGTCCCTC AGCACGATCTACATCGACCCTTCCAAGAGCCACCTCTTCGTGGGTGGTGT CTGTGATATCGTCGCTCCCCCTCCCGTAACACGATCCAAAGGGAGGCTTA GCAGTAACGGGAGTGGTGGTGGTGGTGGTGGTGGTGGAGGCCCGAGGAGC TGGGGAAACAAGGCGTGGGGTTTGGTGTCCGGCGGCGGCATGAGCTGCGG CCTCGACAGCGCCGACAACGACCGCCACGTCGGGAAGGAGGGCGGCGAAC CATCCGCCGCACCGGAAGGAGAGGAAGAGGTGGTGGAGGAGGAGGAGGAG GAGGAGGAGGACGGCACAGCGAGAGATGTTCGAGCTTTCGGCACGGTGCT GATCGAGATGATCCTCAAGTGAGCTATGCAACATTATATAGTCTTTTGTC AGATATGCACGACGACTGCCTACAGAGTAGGTTGCTGAATCCCCCACTCG CCTGGACTTGGAAAATAAAAAGCAACATTAATACGTCCTTCGACTCTTGC GCCCGCTCGATCCAGCCCCGTTCCTTCGAGAACTGCATGCTCGAACCGTT GTCTGACTTATCCTACAACGTCTTGGGCGTTCTGTCCGTGCAGGAGGAGG TTGGACCCGGCCCTGGCGGAGGACGAGCGGTTCCTGGAGATGCTCTTTGT CTTCTCGGGCTGGCCGGAGTCGGTAGTGGACTTGCTCCGCTCTTGTCGCG CGCCGATCAACGAGGTGTGTAGGCAGGCCAGCGATAGACCGTACAGTCTG TCAGTGTTTTTCCGACCCTTGGGGGCAGAGCATCGGGTTTGTAGGTCGTT GGCTTGTAGTTAACCAGGCTAAGAATTGCTAGAGACCCGACTGCTGTGCA TGTCTCCCGAAGCGAACAAAAAAACATCTCGAGGGAGACAGCCCAGGTGC ACACGGCTGGAGGCGCCACGATCGTGCGCTGCCGTGCCGAGAAAAAGCTC CGTGAAAGAAAATTCGCCGAAAATTCCCACGCCGGAGGATGCCCCTTCTA TTGAGCGAGCCGAGTCTCACCAAGCGCAACAACACCCAGGTATGGCGCGT AACCCCCCCCTTCTCCCAAACAGCTCGCACCTGGCACACCCAATTGATTT GATCCCATTGTTCTCTCTCTCTTCCTGTTTCGATTTTTCGCCGATGTTGT TTCCGTACACTCAGAGGCCATCGGCGGAGCAACTCCTGCGGCACCCGTTC CTGGAGCTCGGGAACGACCTCGACGACGAGGCCGTCTACGGAGACCCCAC CCTCGTCGCCGGCGCTTTCGCCGCCGTCCACGGCCACGAAGGCTTCGCGC ACCAGCCCACCCCCGGCGCTTCTTCCCTGCCCGTCCCCCTCTGCCCCGCT GGTAACGGCAGCGGCGGCGGCGGAACGACGTGCAGCAACACGCCGACCAG CAGCACCGACTGCCCGGCGTGGTCGTCGTCGTCGTGCGGGGGCGGGGGCG GGGGCGTGGGCGGGGGGTATGGGCACCACACCCCGTCGTGCGTGTCCACG GAGTCCCCCTCGCCGTCGTCGCCGTCCGCGGCGCCTTCTTTCGGCGGGGT GCCGACCGTGCCGTCGCCGGCCACGGCGGCGATGTCGGCGGCGGCCGTGG GCCCGTTCGCGTCCCCGGGCGGGTTCGGACCCTACCTTGACGCTGCCGCC GCCGCCGCTGGGGGCGGAGGCTACGGCTTTGACCGGGGCGAGGACTTCTC GTCGCTTCTGCCGGCCGGGGTGACTCTGGCGGCGTACGAGAATGTCCAGG CGATCGCCGCCAGGATGCAGCAGGCAGCCCACCCTTACTCGGGCCCCGGC GCCGCCGCTCCGTTTCACCACCACCCCACGAACGGCTACGACGACGATGG CCGAGGCGAACGCGTCGGCCGGAACCGATCGGCCTCGGCCGGCGGCATGC CTGGCGGCGGCAGCCGCAGCGAGGACGCCGGGATCGGCGGGTACGGCTTT GGGCTTTCTCAGCGCGAGGAGGGAGGCCTCGGCGAGGGAGGCGGAGGGGT CGCGTCGACGGGCCGACCGCGCTCGGCGTCGGAAGACGCGGTGTGGGACA TGCTGCCCTCCGACGAGTCCCAGTGCCGCCGGCCGTTTTCTGTGAGCGCC GTGGAAGGGCGGCACGGGTACTGA
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Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig8310:677..4750+

>mRNA_E_fasciculatus_S2_contig8310.16456.1 ID=mRNA_E_fasciculatus_S2_contig8310.16456.1|Name=mRNA_E_fasciculatus_S2_contig8310.16456.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=1818bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig8310:677..4750+ (Ectocarpus fasciculatus EfasUO2)
ATGTGGTGGCCGTCCCTTTCTCTGCCCCACCGCAGAGAGTTGCCGCCCAA
TGAGAGAAGTTCGATGAAGAGGACCATCGACCTTCTACAGGGATTGAAGC
ACGACCATGTCCTGGGGGTGCGCCGCTACTGGGACGCTTCGAGAGCCGGC
CCGAAAGAGCGACAGTCCCGATCGCTGCCTTGGCAGTCGGGGGAGACATC
GGCCGGGGAGGGGGAGCGCGTGGTCTTCCTGACCACGCCGTGTACAACGC
TGGAGGCCTTCGTGGACACCAAGGTGGAGTTCCTTCGCTGGCGCGTGGTG
AAGCGATGGAGCCGACAGATTCTGGAGGCGTTGTTGTTCCTTCACGATCA
GTCCCCTCCTGTGGTACACAACACGATCTACATCGACCCTTCCAAGAGCC
ACCTCTTCGTGGGTGGTGTCTGTGATATCGTCGCTCCCCCTCCCGTAACA
CGATCCAAAGGGAGGCTTAGCAGTAACGGGAGTGGTGGTGGTGGTGGTGG
TGGTGGAGGCCCGAGGAGCTGGGGAAACAAGGCGTGGGGTTTGGTGTCCG
GCGGCGGCATGAGCTGCGGCCTCGACAGCGCCGACAACGACCGCCACGTC
GGGAAGGAGGGCGGCGAACCATCCGCCGCACCGGAAGGAGAGGAAGAGGT
GGTGGAGGAGGAGGAGGAGGAGGAGGAGGACGGCACAGCGAGAGATGTTC
GAGCTTTCGGCACGGTGCTGATCGAGATGATCCTCAAGAGGAGGTTGGAC
CCGGCCCTGGCGGAGGACGAGCGGTTCCTGGAGATGCTCTTTGTCTTCTC
GGGCTGGCCGGAGTCGGTAGTGGACTTGCTCCGCTCTTGTCGCGCGCCGA
TCAACGAGAGGCCATCGGCGGAGCAACTCCTGCGGCACCCGTTCCTGGAG
CTCGGGAACGACCTCGACGACGAGGCCGTCTACGGAGACCCCACCCTCGT
CGCCGGCGCTTTCGCCGCCGTCCACGGCCACGAAGGCTTCGCGCACCAGC
CCACCCCCGGCGCTTCTTCCCTGCCCGTCCCCCTCTGCCCCGCTGGTAAC
GGCAGCGGCGGCGGCGGAACGACGTGCAGCAACACGCCGACCAGCAGCAC
CGACTGCCCGGCGTGGTCGTCGTCGTCGTGCGGGGGCGGGGGCGGGGGCG
TGGGCGGGGGGTATGGGCACCACACCCCGTCGTGCGTGTCCACGGAGTCC
CCCTCGCCGTCGTCGCCGTCCGCGGCGCCTTCTTTCGGCGGGGTGCCGAC
CGTGCCGTCGCCGGCCACGGCGGCGATGTCGGCGGCGGCCGTGGGCCCGT
TCGCGTCCCCGGGCGGGTTCGGACCCTACCTTGACGCTGCCGCCGCCGCC
GCTGGGGGCGGAGGCTACGGCTTTGACCGGGGCGAGGACTTCTCGTCGCT
TCTGCCGGCCGGGGTGACTCTGGCGGCGTACGAGAATGTCCAGGCGATCG
CCGCCAGGATGCAGCAGGCAGCCCACCCTTACTCGGGCCCCGGCGCCGCC
GCTCCGTTTCACCACCACCCCACGAACGGCTACGACGACGATGGCCGAGG
CGAACGCGTCGGCCGGAACCGATCGGCCTCGGCCGGCGGCATGCCTGGCG
GCGGCAGCCGCAGCGAGGACGCCGGGATCGGCGGGTACGGCTTTGGGCTT
TCTCAGCGCGAGGAGGGAGGCCTCGGCGAGGGAGGCGGAGGGGTCGCGTC
GACGGGCCGACCGCGCTCGGCGTCGGAAGACGCGGTGTGGGACATGCTGC
CCTCCGACGAGTCCCAGTGCCGCCGGCCGTTTTCTGTGAGCGCCGTGGAA
GGGCGGCACGGGTACTGA
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