mRNA_E_fasciculatus_S2_contig8310.16456.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig8310.16456.1 vs.
Match: Protein (kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LH97_9PHAE) HSP 1 Score: 724 bits (1868), Expect = 2.930e-255 Identity = 451/618 (72.98%), Postives = 467/618 (75.57%), Query Frame = 1
Query: 7 WPSLSLPHRRELPPNERSSMKRTIDLLQGLKHDHVLGVRRYWDASRAGPKERQSRSLPWQSGETSAGEGERVVFLTTPCTTLEAFVDTKVEFLRWRVVKRWSRQILEALLFLHDQSPPVVH-----NTIYIDPSKSHLFVGGVCDIVAPPPVTRSKGRLSSNGSXXXXXXXXXPRSWGNKAWGLVSGGGMSCGLDSADNDRHVGKEGGEPSAAPEGEXXXXXXXXXXXX--DGTARDVRAFGTVLIEMILKRRLDPALAEDERFLEMLFVFSGWPESVVDLLRSCRAPINERPSAEQLLRHPFLELGNDLDDEAVYGDPTLVAGAFAAVHGHEGFAHQPTPGASSLPVPLCPA--GNGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYGHHTPSCVSTESPSPSSPSAAPSFGGVPTVPSPATAAMSAA----AVGPFASPGGFGPYLDAAAXXXXXXGYGFDRGEDFSSLLPAGVTLAAYENVQAIAARMQQAAHPYSGPGAAAPFHHHPTNGYDDDGRG-ERVGRNRSASAG-GMPGGGSRSEDXXXXXXXXXXXXXXXXXXXXXXGGVASTGRPRSASEDAVWDMLPSDESQCRRPFSVSAVEGRHGY 1815
W L+L RELPP ERS+MKR++DLLQ LKHDHVLGVRRYWDAS AGP ERQSR+LPWQSGETSA EGERVVFLTTPCTTLEAFVDTKVEFLRWRVVKRWS+QIL+ALLFLHD SPPVVH +TIYIDPSKSHLFVGGVC+IVAPPP TRSKG L S+GS P SWGNKAWGLVSGGGM+CGLDSAD+ XXXXXXXXXXXX DG ARDVR FGTV+IEMILKRRLDPALAEDERFLEML VFSGWPE+VVDLLRSCRAPINERPSAEQLLRHPFLELGNDLDDEAVYGDPTLVA AFAAVHGH GFAHQ PGAS LPVPLCPA G GS XXXXXXXX HTPSCVSTESPSPSSPSAAPSFGGVPTVPSP T A GPFAS GG G Y A XXX GYG D GEDFSS LPAGVT AAY N +AIAARMQ AAHPYS P AAPFHH PTN YDDDG+G ER GRNRSASAG M GGSRSED XXXXXX G GRPRSASEDAVWDMLPSDESQCRRPFSVSAVEGRHGY
Sbjct: 35 WNELNL---RELPPKERSAMKRSVDLLQELKHDHVLGVRRYWDASPAGPVERQSRTLPWQSGETSAEEGERVVFLTTPCTTLEAFVDTKVEFLRWRVVKRWSQQILKALLFLHDHSPPVVHKNLSLSTIYIDPSKSHLFVGGVCNIVAPPPATRSKGMLCSSGSGGGVVGGG-PMSWGNKAWGLVSGGGMNCGLDSADDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGRARDVRGFGTVVIEMILKRRLDPALAEDERFLEMLSVFSGWPEAVVDLLRSCRAPINERPSAEQLLRHPFLELGNDLDDEAVYGDPTLVAAAFAAVHGHGGFAHQLPPGAS-LPVPLCPARCGGGSGTTWSNTPTSSTDFAAWSSSCGGXXXXXXXX-------HTPSCVSTESPSPSSPSAAPSFGGVPTVPSPPTMXXXXXXXXXAAGPFASQGGLGSYT--AGGGXXXRGYGLDWGEDFSSHLPAGVTPAAYANAKAIAARMQHAAHPYSNPAGAAPFHH-PTNVYDDDGQGGERGGRNRSASAGRDMRSGGSRSEDTGIGGYGFGVSQREEGXXXXXXXG----GRPRSASEDAVWDMLPSDESQCRRPFSVSAVEGRHGY 633
BLAST of mRNA_E_fasciculatus_S2_contig8310.16456.1 vs.
Match: Protein (kinase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPS4_ECTSI) HSP 1 Score: 702 bits (1812), Expect = 4.930e-246 Identity = 445/621 (71.66%), Postives = 458/621 (73.75%), Query Frame = 1
Query: 7 WPSLSLPHRRELPPNERSSMKRTIDLLQGLKHDHVLGVRRYWDASRAGPKERQSRSLPWQSGETSAGEGERVVFLTTPCTTLEAFVDTKVEFLRWRVVKRWSRQILEALLFLHDQSPPVVHNTIYIDPSKSHLFVGGVCDIVAPPPVTRSKGRLSSNGSXXXXXXXXXPRSWGNKAWGLVSGGGMSCGLDSA---DNDRHVGKEGGEPSAAPEGEXXXXXXXXXXXXDGTARDVRAFGTVLIEMILKRRLDPALAEDERFLEMLFVFSGWPESVVDLLRSCRAPINE----------RPSAEQLLRHPFLELGNDLDDEAVYGDPTLVAGAFAAVHGHEGFAHQPTPGASSLPVPLCPAGNGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYGHHTPSCVSTESPSPSSPSAAPSFGGVPTVPSPATAAMS---AAAVGPFASPGGFGPYLDAAAXXXXXXGYGFDRGEDFSSLLPAGVTLAAYENVQAIAARMQQAAHPYSGPGAAAPFHHHPTNGYDDDGRGE-RVGRNRSASAG-GMPGGGSRSEDXXXXXXXXXXXXXXXXXXXXXXGGVASTGRPRSASEDAVWDMLPSDESQCRRPFSVSAVEGRHGY 1815
W L+L RELPP+ERSSMKRTIDLLQGLKHDHVLGVRRYW+ASRAGP ERQSR+LPWQSGETSAGEGERVVFLTTPCTTLEAFVDTKVEFLRWRVVKRWSRQILEALLFLHDQSPPVVHNTIYIDPSK+HLFVGGVCDI AP XXXXXXXXXP +WGNKAWGLVSGGGM+CGL SA XXXXXXXXXXXXDG ARDVR FGTV+IEMILK RLDPALAEDERFLEML VFSGWPESVVDLLRSCRAPINE RPSAEQLLRHPFLELGNDLDDEAVYGDPTLVA AFAAVHGH GFAHQ PGAS LPVPLCPA G XX +GHHTPSCVSTESPSPSSPSAAPSFGGVPTVPS +AAVGPFAS GG GPY + G G EDFSSLLPAGVT AY N +AIAARMQ AAHPYS AAPFHH PTN YDDDG+GE RVGRNRSASAG GM GGSRSED XXXXXXXXX GRPRSASEDAVWDMLPSDESQCRRPFSVSAVEGRHGY
Sbjct: 86 WNELNL---RELPPDERSSMKRTIDLLQGLKHDHVLGVRRYWEASRAGPAERQSRALPWQSGETSAGEGERVVFLTTPCTTLEAFVDTKVEFLRWRVVKRWSRQILEALLFLHDQSPPVVHNTIYIDPSKNHLFVGGVCDIAAP--XXXXXXXXXXXXXXXXXXXXXXPMNWGNKAWGLVSGGGMNCGLHSAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGRARDVRGFGTVVIEMILKGRLDPALAEDERFLEMLSVFSGWPESVVDLLRSCRAPINEPSLIKRYNFQRPSAEQLLRHPFLELGNDLDDEAVYGDPTLVAAAFAAVHGHGGFAHQLLPGAS-LPVPLCPARCGGGGGTTCSNTPTSSTDFAAWSSCGGXXAG-------HGHHTPSCVSTESPSPSSPSAAPSFGGVPTVPSSXXXXXXXXMSAAVGPFASQGGLGPYTNGG-------GGGGSGYEDFSSLLPAGVTPTAYANAKAIAARMQHAAHPYSNGAGAAPFHH-PTNVYDDDGQGEERVGRNRSASAGEGMRSGGSRSEDTGIGGYGFGVSQRXXXXXXXXX----XXGRPRSASEDAVWDMLPSDESQCRRPFSVSAVEGRHGY 681
BLAST of mRNA_E_fasciculatus_S2_contig8310.16456.1 vs.
Match: Protein (kinase domain-containing protein n=3 Tax=Phytophthora TaxID=4783 RepID=A0A421FJA9_9STRA) HSP 1 Score: 70.5 bits (171), Expect = 2.340e-9 Identity = 40/128 (31.25%), Postives = 69/128 (53.91%), Query Frame = 1
Query: 40 LPPNERSSMKRTIDLLQGLKHDHVLGVRRYWDASRAGPKERQSRSLPWQSGETSAGEGERVVFLTTPCT--TLEAFVDTKVEFLRWRVVKRWSRQILEALLFLHDQSPPVVHNTIYIDPSKSHLFVGG 417
LP E++ + + + LLQ L+H +++ W + E +VVF+T T TL++++ +V+F++W+++KRW QILE L +LH+QSPPV+H + D ++FV G
Sbjct: 62 LPTTEKTRIIQEVQLLQKLEHKNIINFYGSWFSK----------------------EKNQVVFITEIMTSGTLKSYIK-RVQFIKWKIIKRWCIQILEGLHYLHNQSPPVIHRDLKCD----NIFVNG 162
BLAST of mRNA_E_fasciculatus_S2_contig8310.16456.1 vs.
Match: Protein (kinase domain-containing protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y9K5_AURAN) HSP 1 Score: 68.6 bits (166), Expect = 2.970e-9 Identity = 40/134 (29.85%), Postives = 71/134 (52.99%), Query Frame = 1
Query: 34 RELPPNERSSMKRTIDLLQGLKHDHVLGVRRYWDASRAGPKERQSRSLPWQSGETSAGEGERVVFLTTPCTT--LEAFVDTKVEFLRWRVVKRWSRQILEALLFLHDQSPPVVHN-----TIYIDPSKSHLFVG 414
+ +PPNE++ + + LL L+H++++ W + GE V F+T ++ L+ F++ KV+ +RW+++KRW RQIL+AL +LH Q+PP++H I+I+ S L +G
Sbjct: 19 KTMPPNEKARVINEVRLLDRLEHENIIDFHGSW---------------------VNRERGE-VCFITEILSSGSLKKFIN-KVQVVRWKIIKRWVRQILKALAYLHSQTPPIIHRDIKCENIFINGSTGDLRIG 129
BLAST of mRNA_E_fasciculatus_S2_contig8310.16456.1 vs.
Match: Protein (kinase domain-containing protein n=1 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RMH2_9STRA) HSP 1 Score: 70.5 bits (171), Expect = 6.120e-9 Identity = 40/128 (31.25%), Postives = 69/128 (53.91%), Query Frame = 1
Query: 40 LPPNERSSMKRTIDLLQGLKHDHVLGVRRYWDASRAGPKERQSRSLPWQSGETSAGEGERVVFLTTPCT--TLEAFVDTKVEFLRWRVVKRWSRQILEALLFLHDQSPPVVHNTIYIDPSKSHLFVGG 417
LP E++ + + + LLQ L+H +++ W + E +VVF+T T TL++++ +V+F++W+++KRW QILE L +LH+QSPPV+H + D ++FV G
Sbjct: 62 LPSTEKTRIIQEVQLLQKLEHKNIINFYGSWFSK----------------------EKNQVVFITEIMTSGTLKSYIK-RVQFIKWKIIKRWCIQILEGLHYLHNQSPPVIHRDLKCD----NIFVNG 162
BLAST of mRNA_E_fasciculatus_S2_contig8310.16456.1 vs.
Match: Hypothetical (protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JUI1_9STRA) HSP 1 Score: 70.1 bits (170), Expect = 9.810e-9 Identity = 80/310 (25.81%), Postives = 126/310 (40.65%), Query Frame = 1
Query: 34 RELPPNERSSMKRTIDLLQGLKHDHVLGVRRYWDASRAGPKERQSRSLPWQSGETSAGEGERVVFLTTPCTT--LEAFVDTKVEFLRWRVVKRWSRQILEALLFLHDQSPPVVHNTIYIDPSKSHLFVGGVCDIVAPPPVTRSKGRLSSNGSXXXXXXXXXPRSWGNKAWGLVSGGGMSCGLDSADNDRHVGKEGGEPSAAPEGEXXXXXXXXXXXXDGTARDVRAFGTVLIEMILKRR-LDPALAEDERFLEMLFVFSGWPESVVD------LLRSCRA--PINERPSAEQLLRHPFLELGNDLDDEAV 930
+ LP E++ + + LL L+H++++ W + +GE VVF+T ++ L+ F++ KV+ +RW++VKRW +QIL+AL +LH Q PP++H I D ++F+ G S G L GL + R G +G PE D D+ AFG +IEMI K+ D + + ++ + + +D +RSC A P ER SA QLL+HPFL+ D D+ V
Sbjct: 81 KNLPAAEKARVINEVRLLDRLEHENIIDFHGSW---------------------VNREKGE-VVFVTEILSSGSLKRFIN-KVKLIRWKIVKRWCKQILKALAYLHSQDPPIIHRDIKCD----NIFING------------STGDLRIG----------------------------DLGLSTTVTLRPPGTKGQSVLGTPE---FMAPELYEESYDEKV-DIYAFGMCVIEMITKQLPYDECANATQIYRKVTNNIAPLAFNFIDNILAKEFIRSCVAAHPF-ERFSAAQLLQHPFLQSDTDFDETEV 318
BLAST of mRNA_E_fasciculatus_S2_contig8310.16456.1 vs.
Match: Serine/threonine (protein kinase n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225X176_9STRA) HSP 1 Score: 69.3 bits (168), Expect = 1.580e-8 Identity = 39/128 (30.47%), Postives = 68/128 (53.12%), Query Frame = 1
Query: 40 LPPNERSSMKRTIDLLQGLKHDHVLGVRRYWDASRAGPKERQSRSLPWQSGETSAGEGERVVFLTTPCT--TLEAFVDTKVEFLRWRVVKRWSRQILEALLFLHDQSPPVVHNTIYIDPSKSHLFVGG 417
LP E++ + + + LLQ L+H +++ W + E +VVF+T T TL++++ +V+F++W+++KRW QILE L +LH Q+PPV+H + D ++FV G
Sbjct: 61 LPSTEKTRIIQEVQLLQKLEHKNIINFYGSWFSK----------------------EKNQVVFITEIMTSGTLKSYIK-RVQFIKWKIIKRWCLQILEGLHYLHSQNPPVIHRDLKCD----NIFVNG 161
BLAST of mRNA_E_fasciculatus_S2_contig8310.16456.1 vs.
Match: Protein (kinase domain-containing protein n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VCW2_9STRA) HSP 1 Score: 69.3 bits (168), Expect = 1.640e-8 Identity = 39/128 (30.47%), Postives = 69/128 (53.91%), Query Frame = 1
Query: 40 LPPNERSSMKRTIDLLQGLKHDHVLGVRRYWDASRAGPKERQSRSLPWQSGETSAGEGERVVFLTTPCT--TLEAFVDTKVEFLRWRVVKRWSRQILEALLFLHDQSPPVVHNTIYIDPSKSHLFVGG 417
LP E++ + + + LLQ L+H +++ W + E +VVF+T T TL++++ +V+F++W+++KRW QILE L +LH+Q+PPV+H + D ++FV G
Sbjct: 61 LPSTEKTRIIQEVQLLQKLEHKNIINFYGSWFSK----------------------EKNQVVFITEIMTSGTLKSYIK-RVQFIKWKIIKRWCIQILEGLHYLHNQNPPVIHRDLKCD----NIFVNG 161
BLAST of mRNA_E_fasciculatus_S2_contig8310.16456.1 vs.
Match: Protein (kinase domain-containing protein n=1 Tax=Phytophthora nicotianae TaxID=4790 RepID=A0A0W8DIG9_PHYNI) HSP 1 Score: 68.9 bits (167), Expect = 1.660e-8 Identity = 39/128 (30.47%), Postives = 68/128 (53.12%), Query Frame = 1
Query: 40 LPPNERSSMKRTIDLLQGLKHDHVLGVRRYWDASRAGPKERQSRSLPWQSGETSAGEGERVVFLTTPCT--TLEAFVDTKVEFLRWRVVKRWSRQILEALLFLHDQSPPVVHNTIYIDPSKSHLFVGG 417
LP E++ + + + LLQ L+H +++ W + E +VVF+T T TL++++ +V+F++W+++KRW QILE L +LH Q+PPV+H + D ++FV G
Sbjct: 61 LPSTEKTRIIQEVQLLQKLEHKNIINFYGSWFSK----------------------EKNQVVFITEIMTSGTLKSYIK-RVQFIKWKIIKRWCIQILEGLHYLHSQNPPVIHRDLKCD----NIFVNG 161
BLAST of mRNA_E_fasciculatus_S2_contig8310.16456.1 vs.
Match: Protein (kinase domain-containing protein n=4 Tax=Phytophthora TaxID=4783 RepID=G4ZGR4_PHYSP) HSP 1 Score: 68.9 bits (167), Expect = 2.070e-8 Identity = 39/128 (30.47%), Postives = 68/128 (53.12%), Query Frame = 1
Query: 40 LPPNERSSMKRTIDLLQGLKHDHVLGVRRYWDASRAGPKERQSRSLPWQSGETSAGEGERVVFLTTPCT--TLEAFVDTKVEFLRWRVVKRWSRQILEALLFLHDQSPPVVHNTIYIDPSKSHLFVGG 417
LP E++ + + + LLQ L+H +++ W + E +VVF+T T TL++++ +V+F++W+++KRW QILE L +LH Q+PPV+H + D ++FV G
Sbjct: 61 LPSTEKTRIIQEVQLLQKLEHKNIINFYGSWFSK----------------------EKNQVVFITEIMTSGTLKSYIK-RVQFIKWKIIKRWCIQILEGLHYLHSQNPPVIHRDLKCD----NIFVNG 161 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig8310.16456.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig8310.16456.1 >prot_E_fasciculatus_S2_contig8310.16456.1 ID=prot_E_fasciculatus_S2_contig8310.16456.1|Name=mRNA_E_fasciculatus_S2_contig8310.16456.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=606bp MWWPSLSLPHRRELPPNERSSMKRTIDLLQGLKHDHVLGVRRYWDASRAGback to top mRNA from alignment at E_fasciculatus_S2_contig8310:677..4750+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig8310.16456.1 ID=mRNA_E_fasciculatus_S2_contig8310.16456.1|Name=mRNA_E_fasciculatus_S2_contig8310.16456.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=4074bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig8310:677..4750+ (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig8310:677..4750+ >mRNA_E_fasciculatus_S2_contig8310.16456.1 ID=mRNA_E_fasciculatus_S2_contig8310.16456.1|Name=mRNA_E_fasciculatus_S2_contig8310.16456.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=1818bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig8310:677..4750+ (Ectocarpus fasciculatus EfasUO2)back to top |