mRNA_E_fasciculatus_S2_contig8251.16401.1 (mRNA) Ectocarpus fasciculatus EfasUO2

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E_fasciculatus_S2_contig8251.16401.1
Unique NamemRNA_E_fasciculatus_S2_contig8251.16401.1
TypemRNA
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Homology
BLAST of mRNA_E_fasciculatus_S2_contig8251.16401.1 vs.
Match: Hydrocephalus-inducing (protein, Hydin-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJY6_ECTSI)

HSP 1 Score: 429 bits (1103), Expect = 7.540e-135
Identity = 236/292 (80.82%), Postives = 240/292 (82.19%), Query Frame = 1
Query:    1 ERSRLHAEMARMQSLEEEALLSGTVAGQQSSGALGGGRGXXXXXXDAEGPQTDGDETDDYSDK------------------------------------------AAQAALKRKYRHLRRALGKDAMLFADEIFEIRPLEGEIWARSEIEVTVFFRPRTTTEYSSHAFLDCIGREERLPLRLGGSGIGPKVVLSFDVLDMGDVFINSRHVHEVTLLNRGDIAADWTLQAPQTPFARKFRFGPMKGTLDVKDSVTVTMEFESDILGEFAELFRFVLRGNEEPVPCQFKGHVVS 750
            ERSRLHAEM RMQSLEEEALLSGTVAGQQSSGA GGG  XXXXXX    PQTDGDETDDYSD+                                          AAQAALKRKYRHLRRALGKDAMLFADEIFEIRPLEGEIWARSEIEVTVFFRPRTTTEY SHAFLDCIGREERLPLRLGGSGIGPKVVLSFDVLDMGDVFINSRHVHEVTLLNRGDIAADWTLQAPQTPF+RKFRFGPMKGTLDVKDSVTVTMEFESDILGEF+ELFRFVLRGNEEPVPCQFKGHV+ 
Sbjct:  391 ERSRLHAEMTRMQSLEEEALLSGTVAGQQSSGARGGGXXXXXXXXXXXXPQTDGDETDDYSDQEEWATATASTVAALGASHXXXXXXXXXXVTASSSVGLPPSFQAAQAALKRKYRHLRRALGKDAMLFADEIFEIRPLEGEIWARSEIEVTVFFRPRTTTEYGSHAFLDCIGREERLPLRLGGSGIGPKVVLSFDVLDMGDVFINSRHVHEVTLLNRGDIAADWTLQAPQTPFSRKFRFGPMKGTLDVKDSVTVTMEFESDILGEFSELFRFVLRGNEEPVPCQFKGHVIG 682          
BLAST of mRNA_E_fasciculatus_S2_contig8251.16401.1 vs.
Match: MSP (domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5Z3_9PHAE)

HSP 1 Score: 344 bits (883), Expect = 2.770e-105
Identity = 209/339 (61.65%), Postives = 212/339 (62.54%), Query Frame = 1
Query:    1 ERSRLHAEMARMQSLEEEALLSGTVAGQQSSGALGGGRGXXXXXXDAEGPQTDGDETDDYSDK-----------------------------------------------------------------------------------------AAQAALKRKYRHLRRALGKDAMLFADEIFEIRPLEGEIWARSEIEVTVFFRPRTTTEYSSHAFLDCIGREERLPLRLGGSGIGPKVVLSFDVLDMGDVFINSRHVHEVTLLNRGDIAADWTLQAPQTPFARKFRFGPMKGTLDVKDSVTVTMEFESDILGEFAELFRFVLRGNEEPVPCQFKGHVVS 750
            ERSRLHAEMARMQSLEEEALLSGTVAGQQS         XXXXXX   GPQTDGDETDDYSD+                                                                                         AAQAALKRKYRHLRRALGKDAMLFADEIFEIRPLEGEIWARSEIEVTVFFRPRTTTEY SHAFLDCIGREERLPLRLGGSGIGPKVVLSFDVLDMGDVFINSRHVH+VTLLNRGDIAADWTLQAPQTPFARKFRFGPMKGTLDVKD                        RGNEEPVPCQFKGHV+ 
Sbjct:  284 ERSRLHAEMARMQSLEEEALLSGTVAGQQSGXXXXXXXXXXXXXXXXXGPQTDGDETDDYSDQPSEVLKEDFRRCCVKLETPRSNASTLVGAFDDSSNISLKLELTDHRQEEWATATASTVAXXXXXXXXXXXXXXXXXXASSSVGLPPSVQAAQAALKRKYRHLRRALGKDAMLFADEIFEIRPLEGEIWARSEIEVTVFFRPRTTTEYGSHAFLDCIGREERLPLRLGGSGIGPKVVLSFDVLDMGDVFINSRHVHQVTLLNRGDIAADWTLQAPQTPFARKFRFGPMKGTLDVKD------------------------RGNEEPVPCQFKGHVIG 598          
BLAST of mRNA_E_fasciculatus_S2_contig8251.16401.1 vs.
Match: Uncharacterized (protein (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SNA2_9ARCH)

HSP 1 Score: 207 bits (526), Expect = 2.290e-57
Identity = 100/185 (54.05%), Postives = 127/185 (68.65%), Query Frame = 1
Query:  196 QAALKRKYRHLRRALGKDAMLFADEIFEIRPLEGEIWARSEIEVTVFFRPRTTTEYSSHAFLDCIGREERLPLRLGGSGIGPKVVLSFDVLDMGDVFINSRHVHEVTLLNRGDIAADWTLQAPQTPFARKFRFGPMKGTLDVKDSVTVTMEFESDILGEFAELFRFVLRGNEEPVPCQFKGHVVS 750
            +A + RKYR+LR+AL  D MLF D+IF+I P EGE+WA +E EVT+ FRP T   Y+  AFLD  GR +RLPL+L G GIGP   LSFDVLD+GDVF+N    +E+++ N+GDI A WT  +  T F  KF+F P  G L    S  + + FESDILGEF+E FRF L+GNE  + CQ KGHV+ 
Sbjct:  289 EATIIRKYRNLRKALELDKMLFVDDIFDISPSEGEVWAHAETEVTIVFRPDTAALYNCLAFLDVSGRHDRLPLQLTGQGIGPHAALSFDVLDIGDVFVNDVSTYELSIKNKGDIPAQWTFMSSLTKFGNKFQFSPTDGYLLPNQSQNIAIRFESDILGEFSEFFRFALQGNENMLVCQIKGHVLG 473          
BLAST of mRNA_E_fasciculatus_S2_contig8251.16401.1 vs.
Match: Uncharacterized (protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y448_AURAN)

HSP 1 Score: 195 bits (496), Expect = 2.480e-53
Identity = 120/255 (47.06%), Postives = 157/255 (61.57%), Query Frame = 1
Query:    1 ERSRLHAEMARMQSLEEEALLSGTVAGQQSSGALGGGRGXXXXXXDAEGPQTDGDETDDYSD-----KAAQAALKRKYRHLRRALGKDAMLFADEIFEIRPLEGEIWARSEIEVTVFFRPRTTTEYSSHAFLDCIGREERLPLRLGGSGIGPKVVLSFDVLDMGDVFINSRHVHEVTLLNRGDIAADWTLQAPQTPFARKFRFGPMKGTLDVKDSVTVTMEFESDILGEFAELFRFVLRGNEEPVPCQFKGHVVS 750
            ERSRLH+++ RMQ L EEA L  T+   + +     G G        +  ++DGD + D  +     +AA++AL  KYRHLR+AL KD M+FADE FEI+PL GE+ A SEIEV+V FRP T  +Y+  A+LD +GREERLP+ L G GIGPK  LS+DVLDMGDVFI+S + + + + N+GDI A+W L  P T     F+F P  G L V  S  +T+ F    LGEF EL    L G+       FKGHV+ 
Sbjct:  301 ERSRLHSDLERMQQL-EEAHLEETLRQDELAALAHHGHGFSNQP---QSDESDGDLSGDEGNVPGATRAARSALTTKYRHLRQALEKDDMVFADENFEIKPLSGEVRALSEIEVSVTFRPDTAADYACTAYLDVMGREERLPIWLTGLGIGPKGALSYDVLDMGDVFISSPYEYSLGITNKGDIPAEWKLFPPPTT---TFQFSPTSGVLAVGGSEELTVHFMGTTLGEFCELVDVALDGSNXXXXXXFKGHVIG 548          
BLAST of mRNA_E_fasciculatus_S2_contig8251.16401.1 vs.
Match: Hypothetical (protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SKS6_9STRA)

HSP 1 Score: 185 bits (469), Expect = 1.030e-49
Identity = 113/255 (44.31%), Postives = 156/255 (61.18%), Query Frame = 1
Query:    1 ERSRLHAEMARMQSLEEEALLSGTVAGQQSSGALGGGRGXXXXXXDAEGPQTDGDETDDYSD-----KAAQAALKRKYRHLRRALGKDAMLFADEIFEIRPLEGEIWARSEIEVTVFFRPRTTTEYSSHAFLDCIGREERLPLRLGGSGIGPKVVLSFDVLDMGDVFINSRHVHEVTLLNRGDIAADWTLQAPQTPFARKFRFGPMKGTLDVKDSVTVTMEFESDILGEFAELFRFVLRGNEEPVPCQFKGHVVS 750
            ER RL +++ RMQ L EEA L   ++ +  S              D EG  +DGD + D        +AA++AL  KYRHLR+AL KD M+F+DE FEI+PL GE+ A SE+++ V FRP T  +Y+  A+LD +GREERLP+ L G GIGPK  LS+DVLD+GDVF+   + + +++ N+GDI A W L  P++     F   P +GTL V  +  +++EF    LGEF EL    L G+ E + CQFKGHV+ 
Sbjct:  297 ERERLRSDLERMQQL-EEAHLEEALSKRPPS--------------DDEG--SDGDLSGDEGHVSAGARAARSALATKYRHLRQALEKDDMVFSDETFEIKPLSGEVRALSEVDIHVMFRPDTAADYACTAYLDVVGREERLPVWLTGIGIGPKGALSYDVLDLGDVFVGHPYSYTLSIDNKGDIPAAWRLNPPESD---AFVVEPTQGTLAVSGTQQLSVEFLGSTLGEFCELVDVELDGSNERLTCQFKGHVIG 531          
BLAST of mRNA_E_fasciculatus_S2_contig8251.16401.1 vs.
Match: Uncharacterized (protein n=11 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4EW24_VITBC)

HSP 1 Score: 184 bits (468), Expect = 1.410e-49
Identity = 92/199 (46.23%), Postives = 130/199 (65.33%), Query Frame = 1
Query:  154 TDGDETDDYSDKAAQAALKRKYRHLRRALGKDAMLFADEIFEIRPLEGEIWARSEIEVTVFFRPRTTTEYSSHAFLDCIGREERLPLRLGGSGIGPKVVLSFDVLDMGDVFINSRHVHEVTLLNRGDIAADWTLQAPQTPFARKFRFGPMKGTLDVKDSVTVTMEFESDILGEFAELFRFVLRGNEEPVPCQFKGHVVS 750
            +D D+    ++K  +AAL RKYR++ R L  D M F DEIF + PL G IWA+S   VTV F P+    Y   A+ D +G  ER+PL L G GIGPK   S+D LD+GD+FI S+H +EV L++RGDIA +++LQ  +T F  KFRF P  G L+V +SV++T++F  D+LG+F E F ++L G+  P+   F+G  V+
Sbjct:  428 SDTDDPQTKNEKKVEAALDRKYRNIERVLKDDPMYFYDEIFNVEPLMGTIWAQSSCTVTVSFSPKAALCYQCLAYCDIVGCGERVPLLLKGQGIGPKATFSYDELDVGDLFIGSKHKYEVDLISRGDIAVNYSLQPLETAFGPKFRFTPDSGRLEVGESVSITVDFVPDLLGDFCETFTWILEGSAAPITITFRGTCVA 626          
BLAST of mRNA_E_fasciculatus_S2_contig8251.16401.1 vs.
Match: Uncharacterized (protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJI6_9STRA)

HSP 1 Score: 169 bits (429), Expect = 2.130e-44
Identity = 91/204 (44.61%), Postives = 124/204 (60.78%), Query Frame = 1
Query:  190 AAQAALKRKYRHLRRALGKDAMLFADEIFEIRPLEGEIWARSEIEVTVFFRPRTTTEYSSHAFLDCIGREERLPLRLGGSGIGPKVVLSFDVLDMGDVFINSRHVHEVTLLNRGDIAADWTLQAPQT-----PFARKFRFGPMKGTLDVKDSVTVTMEFESDILGEFAELFRFVLRGNEEPVP------------CQFKGHVVS 750
            AA AA++RKYRHLRRA+ +DAMLFAD+ FE+RPL GE+WA +E EVTV FRP    +YS+ A+L+ +GREER P+ L G+GIGP++ LS+  LDMGD+F+     +++T++N+GDI ADW L+  ++       A+    G M G +D  D VTV + F    LG F E     LR                   C F+G VV 
Sbjct:  408 AALAAVRRKYRHLRRAVDEDAMLFADDAFELRPLRGEVWANAETEVTVLFRPGVAMDYSACAYLEVVGREERAPIWLSGAGIGPRIELSYAQLDMGDIFLGLSRAYDLTIVNKGDIPADWALRPARSGSSGGETAKTADGGEMDGEMD--DDVTVRVRFMGAALGAFCETVAVALRSGXXXXXXXXXXXXXXXXXCAFRGRVVG 609          
BLAST of mRNA_E_fasciculatus_S2_contig8251.16401.1 vs.
Match: Hydrocephalus-inducing (protein-like n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GSE6_9STRA)

HSP 1 Score: 164 bits (415), Expect = 1.750e-42
Identity = 82/182 (45.05%), Postives = 113/182 (62.09%), Query Frame = 1
Query:  205 LKRKYRHLRRALGKDAMLFADEIFEIRPLEGEIWARSEIEVTVFFRPRTTTEYSSHAFLDCIGREERLPLRLGGSGIGPKVVLSFDVLDMGDVFINSRHVHEVTLLNRGDIAADWTLQAPQTPFARKFRFGPMKGTLDVKDSVTVTMEFESDILGEFAELFRFVLRGNEEPVPCQFKGHVVS 750
            LK+KYRHLRRA+  DAMLFADE F I PL G++W+ S  EVT+ F P    +Y+S A L   GRE R+PL++ G GIGPK   S  ++D G VFI S H H + + NRGDI  ++ L AP    A    F P  GTL+V ++  + ++F S  LG F+E+  F + G+ + +  + KG+VV 
Sbjct:  482 LKQKYRHLRRAVEDDAMLFADENFRIEPLTGQVWSHSAKEVTISFSPLIAADYASIACLAVTGRENRIPLKILGQGIGPKAAFSAAIVDFGTVFIGSEHTHSIEIENRGDIRCEYLLDAPSEDLASALTFSPSMGTLEVGETRKLQIDFCSGKLGAFSEIITFSMTGSNDKLRVRVKGNVVG 663          
BLAST of mRNA_E_fasciculatus_S2_contig8251.16401.1 vs.
Match: hydrocephalus-inducing (protein homolog n=1 Tax=Acanthaster planci TaxID=133434 RepID=A0A8B7ZYJ1_ACAPL)

HSP 1 Score: 161 bits (408), Expect = 1.480e-41
Identity = 81/184 (44.02%), Postives = 109/184 (59.24%), Query Frame = 1
Query:  199 AALKRKYRHLRRALGKDAMLFADEIFEIRPLEGEIWARSEIEVTVFFRPRTTTEYSSHAFLDCIGREERLPLRLGGSGIGPKVVLSFDVLDMGDVFINSRHVHEVTLLNRGDIAADWTLQAPQTPFARKFRFGPMKGTLDVKDSVTVTMEFESDILGEFAELFRFVLRGNEEPVPCQFKGHVVS 750
            A L R + + R+ +  D+ML+ D  F I PLEG+IW  S  EV V F+P     Y S A+ D  GRE RLPLR+ G G+GPKVV SFD LDMG +F+ S H +EV L N+GDI A + L   QT F  +F+F P +G +       + + F S +LG+F E F   +RG  E +   FKG+V+ 
Sbjct:  377 AILTRTFHNRRKMVEGDSMLYTDSAFTIEPLEGDIWPNSSTEVNVIFKPEEARTYWSTAYCDVTGRETRLPLRMRGDGVGPKVVFSFDALDMGHIFVGSTHTYEVVLSNQGDIDATFNLLPNQTTFGPRFQFSPSEGIVTPGSHQAIKIAFSSPVLGDFDEDFHCSVRGLPEKLKLNFKGNVIG 560          
BLAST of mRNA_E_fasciculatus_S2_contig8251.16401.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Euplotes harpa TaxID=151035 RepID=A0A7S3JKP0_9SPIT)

HSP 1 Score: 148 bits (374), Expect = 2.230e-40
Identity = 75/165 (45.45%), Postives = 105/165 (63.64%), Query Frame = 1
Query:  205 LKRKYRHLRRALGKDAMLFADEIFEIRPLEGEIWARSEIEVTVFFRPRTTTEYSSHAFLDCIGREERLPLRLGGSGIGPKVVLSFDVLDMGDVFINSRHVHEVTLLNRGDIAADWTLQAPQTPFARKFRFGPMKGTLDVKDSV--TVTMEFESDILGEFAELFRF 693
            L RKY+ +R+A+ +D MLF DEIF I PL+G++W  +EI   V F+P+    YS  AF +    EERLPL L G GIGPK  LS    D+GD+F+N +H + + + N+GDI   + L   +TPF  KF F   +G L VK++    + + F+SDILGEF+E FR+
Sbjct:   84 LARKYQSIRKAVEEDLMLFQDEIFTIEPLQGKLWPNTEITCCVTFKPQGPLHYSCTAFCNITCSEERLPLNLTGQGIGPKAALSIKEWDIGDIFVNYKHTYSIAIENKGDITCYYKLIPYETPFGSKFFFSKTEGKLGVKENQREVIDVTFQSDILGEFSETFRW 248          
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig8251.16401.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Hydrocephalus-inducing7.540e-13580.82protein, Hydin-like protein n=1 Tax=Ectocarpus sil... [more]
MSP2.770e-10561.65domain-containing protein n=1 Tax=Ectocarpus sp. C... [more]
Uncharacterized2.290e-5754.05protein (Fragment) n=1 Tax=archaeon TaxID=1906665 ... [more]
Uncharacterized2.480e-5347.06protein n=1 Tax=Aureococcus anophagefferens TaxID=... [more]
Hypothetical1.030e-4944.31protein n=1 Tax=Pelagomonas calceolata TaxID=35677... [more]
Uncharacterized1.410e-4946.23protein n=11 Tax=Vitrella brassicaformis TaxID=116... [more]
Uncharacterized2.130e-4444.61protein (Fragment) n=1 Tax=Tribonema minus TaxID=3... [more]
Hydrocephalus-inducing1.750e-4245.05protein-like n=1 Tax=Hondaea fermentalgiana TaxID=... [more]
hydrocephalus-inducing1.480e-4144.02protein homolog n=1 Tax=Acanthaster planci TaxID=1... [more]
Hypothetical2.230e-4045.45protein (Fragment) n=1 Tax=Euplotes harpa TaxID=15... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig8251contigE_fasciculatus_S2_contig8251:4790..6435 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start1
Seed ortholog score421.4
Seed ortholog evalue2.9e-115
Seed eggNOG ortholog2880.D7FJY6
Preferred nameHYDIN
Model size750
KEGG koko:K17570
Hectar predicted targeting categoryother localisation
GOsGO:0000226,GO:0001578,GO:0002064,GO:0003341,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005856,GO:0005929,GO:0005930,GO:0006928,GO:0006996,GO:0007010,GO:0007017,GO:0007018,GO:0007275,GO:0007399,GO:0007417,GO:0007420,GO:0008150,GO:0009888,GO:0009987,GO:0016043,GO:0021591,GO:0022607,GO:0030030,GO:0030031,GO:0030154,GO:0030855,GO:0032501,GO:0032502,GO:0032838,GO:0035082,GO:0042995,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044085,GO:0044422,GO:0044424,GO:0044430,GO:0044441,GO:0044444,GO:0044446,GO:0044447,GO:0044463,GO:0044464,GO:0044782,GO:0048468,GO:0048513,GO:0048731,GO:0048856,GO:0048869,GO:0060271,GO:0060322,GO:0060429,GO:0060438,GO:0060541,GO:0070925,GO:0071840,GO:0097014,GO:0099568,GO:0120025,GO:0120031,GO:0120036,GO:0120038,GO:1904158,GO:1990716,GO:1990718
Exons3
EggNOG free text desc.axonemal central apparatus assembly
EggNOG OGs28HT9@1,2QQ4F@2759
Cds size726
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01009
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842485.631599-UTR-E_fasciculatus_S2_contig8251:4789..48131696842485.631599-UTR-E_fasciculatus_S2_contig8251:4789..4813Ectocarpus fasciculatus EfasUO2UTRE_fasciculatus_S2_contig8251 4790..4813 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842485.6435316-CDS-E_fasciculatus_S2_contig8251:4813..49781696842485.6435316-CDS-E_fasciculatus_S2_contig8251:4813..4978Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8251 4814..4978 +
1696842485.6537027-CDS-E_fasciculatus_S2_contig8251:5487..59271696842485.6537027-CDS-E_fasciculatus_S2_contig8251:5487..5927Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8251 5488..5927 +
1696842485.6630461-CDS-E_fasciculatus_S2_contig8251:6314..64351696842485.6630461-CDS-E_fasciculatus_S2_contig8251:6314..6435Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig8251 6315..6435 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig8251.16401.1prot_E_fasciculatus_S2_contig8251.16401.1Ectocarpus fasciculatus EfasUO2polypeptideE_fasciculatus_S2_contig8251 4814..6435 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E_fasciculatus_S2_contig8251.16401.1

>prot_E_fasciculatus_S2_contig8251.16401.1 ID=prot_E_fasciculatus_S2_contig8251.16401.1|Name=mRNA_E_fasciculatus_S2_contig8251.16401.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=242bp
MARMQSLEEEALLSGTVAGQQSSGALGGGRGGTGGGEDAEGPQTDGDETD
DYSDKAAQAALKRKYRHLRRALGKDAMLFADEIFEIRPLEGEIWARSEIE
VTVFFRPRTTTEYSSHAFLDCIGREERLPLRLGGSGIGPKVVLSFDVLDM
GDVFINSRHVHEVTLLNRGDIAADWTLQAPQTPFARKFRFGPMKGTLDVK
DSVTVTMEFESDILGEFAELFRFVLRGNEEPVPCQFKGHVVS
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mRNA from alignment at E_fasciculatus_S2_contig8251:4790..6435+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E_fasciculatus_S2_contig8251.16401.1 ID=mRNA_E_fasciculatus_S2_contig8251.16401.1|Name=mRNA_E_fasciculatus_S2_contig8251.16401.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=1646bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig8251:4790..6435+ (Ectocarpus fasciculatus EfasUO2)
GAACGGAGCAGGCTGCACGCTGAAATGGCCAGGATGCAAAGCCTGGAAGA GGAAGCCCTGCTGAGCGGAACGGTCGCCGGCCAGCAATCCAGCGGGGCCC TTGGCGGTGGCAGAGGCGGCACCGGTGGTGGTGAAGATGCGGAGGGACCT CAAACCGATGGAGACGAAACCGACGACTACTCCGACAAGGTGTTCTTTTA GCTGTACGTAGCGAAAAACGTAAGGCATACCCAAAATAAAAACAAACTGT GTGTGTTCCGTGGGAAGGCAGACCCAATATGGTGCATACACGAGATGGAG GAAGATCCCAGATACTTTTTGTGTCAGCCCAGCGAGGTACTCAAGGGAGA AATTGTCGGTAATGTTGCGTCCCACCAAGGGTTCCACGTGATTGGCCCAC AACGAATACGGAACCCGCAGAGAAATGACAAGTTGAGTTGGGCATTATGT TCAACAGCAGACGTTGCTACGTAAAGTTAGAAACGCCGCGTTCAAATGCA ACTACACTGGTGAGTGCCTTCGACGACTTTTCCAATATCTCCTTAAAACT AGAGCTAACTGACCACTCTCAGGAGGAGTGGGCCACCGCCACGGCAAGCA CCGTGGCCGCGTTGGGAGCTAGCAGCGGCGGAGGTGGAGGAGAAGGGGCA GGAACCGTGACGGCGTCGTCATCGGTAGGGCTACCCCCGAGCTTCCAGGC GGCCCAGGCGGCGCTCAAACGCAAGTACCGGCACCTCCGGCGAGCGCTGG GCAAGGACGCGATGCTCTTCGCGGACGAAATCTTCGAGATCCGCCCGCTA GAGGGGGAGATCTGGGCCCGGAGCGAGATCGAGGTTACGGTGTTCTTCCG CCCGCGCACGACGACCGAGTACAGCTCGCACGCCTTCCTCGACTGCATCG GGAGGGAGGAGCGGCTCCCGCTGCGGCTCGGCGGGAGCGGCATCGGCCCC AAGGTCGTGCTGAGCTTCGACGTGCTGGACATGGGGGATGTCTTCATCAA CAGCAGGCACGTGCACGAGGTGACGCTGCTTAACCGCGGTGACATCGCCG CGGATTGGACGCTCCAGGCTCCGCAGACGCCGTTCGCGCGCAAGTTCCGT TTCGGTCCGATGAAGGGCACCCTGGATGTGAAGGACAGGTACGTTGCGGA CAGCCGCTTCGTTCGCTGCGGTTCTAGGTACGTAACCCCTGTTGTTGTGG TGGTGGTGATTTTTGTTGCTGTTCAAGGTTCGTTGGCCATGGTGATCATA GTATCGTTGTTTTTGTTGCAGCGTTCTTTCACACAGAACATTATCATTGG CATCTCCCCCTTATCTCTATTTCCTACGAAGTGGCACGACCCTCCGGTCG TAGCCAGGCTCACACCACATTAAATATGTCATGCACTCTTGTCATATTCT GAATTGTTCCCAACGCGTATTATCGCGATCGTGTTGTCCCGCTCCCCGTC TATAGTGTCACTATATTTCCATCTAACCGTTTCTATTTTCCTCGGTTGGT CTCTTTGTTTCTTCACGGGAGAAAGCGTTACCGTAACGATGGAGTTCGAG TCTGACATCCTTGGAGAGTTCGCGGAATTGTTCCGGTTCGTCCTCAGGGG GAACGAGGAACCCGTTCCGTGCCAGTTTAAAGGGCACGTGGTAAGT
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Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig8251:4790..6435+

>mRNA_E_fasciculatus_S2_contig8251.16401.1 ID=mRNA_E_fasciculatus_S2_contig8251.16401.1|Name=mRNA_E_fasciculatus_S2_contig8251.16401.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=726bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig8251:4790..6435+ (Ectocarpus fasciculatus EfasUO2)
ATGGCCAGGATGCAAAGCCTGGAAGAGGAAGCCCTGCTGAGCGGAACGGT
CGCCGGCCAGCAATCCAGCGGGGCCCTTGGCGGTGGCAGAGGCGGCACCG
GTGGTGGTGAAGATGCGGAGGGACCTCAAACCGATGGAGACGAAACCGAC
GACTACTCCGACAAGGCGGCCCAGGCGGCGCTCAAACGCAAGTACCGGCA
CCTCCGGCGAGCGCTGGGCAAGGACGCGATGCTCTTCGCGGACGAAATCT
TCGAGATCCGCCCGCTAGAGGGGGAGATCTGGGCCCGGAGCGAGATCGAG
GTTACGGTGTTCTTCCGCCCGCGCACGACGACCGAGTACAGCTCGCACGC
CTTCCTCGACTGCATCGGGAGGGAGGAGCGGCTCCCGCTGCGGCTCGGCG
GGAGCGGCATCGGCCCCAAGGTCGTGCTGAGCTTCGACGTGCTGGACATG
GGGGATGTCTTCATCAACAGCAGGCACGTGCACGAGGTGACGCTGCTTAA
CCGCGGTGACATCGCCGCGGATTGGACGCTCCAGGCTCCGCAGACGCCGT
TCGCGCGCAAGTTCCGTTTCGGTCCGATGAAGGGCACCCTGGATGTGAAG
GACAGCGTTACCGTAACGATGGAGTTCGAGTCTGACATCCTTGGAGAGTT
CGCGGAATTGTTCCGGTTCGTCCTCAGGGGGAACGAGGAACCCGTTCCGT
GCCAGTTTAAAGGGCACGTGGTAAGT
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